GntVol1a	GntVol1b	ratioa/b	loga/b	GlcVol1a	GlcVolb	Gnt Avg Vol	Glc Avg Vol	Glc Pct	Gnt Pct	Array Pos	F2	Spot	Min Glc/Gnt Ratio	Log Ratio	GeneM53	b#	M53product	Functional Group	M53 function
3816	3671	1.04	0.017	2967	3166	3743	3066	0.018094	0.028365	E7	4	1851	-1.57	-0.195	thrL	b0001	thr operon leader peptide	Amino acid biosynthesis	leader; Amino acid biosynthesis: Threonine
3862	3728	1.04	0.015	3161	5195	3795	4178	0.024651	0.028757	G7	4	1852	-1.17	-0.067	thrA	b0002	"aspartokinase I, homoserine dehydrogenase I"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Threonine
9530	9658	-1.01	-0.006	12621	15198	9594	13909	0.082076	0.072698	I7	4	1853	1.13	0.053	thrB	b0003	homoserine kinase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Threonine
6188	6122	1.01	0.005	7517	9300	6155	8408	0.049615	0.046644	K7	4	1854	1.06	0.027	thrC	b0004	threonine synthase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Threonine
2414	2436	-1.01	-0.004	3982	4287	2425	4135	0.024397	0.018374	P15	4	2656	1.33	0.123	b0005	b0005	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
352	326	1.00	0.000	315	528	339	421	0.002487	0.002571	B17	4	2657	-1.00	0.000	yaaA	b0006	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1508	1001	1.51	0.178	2165	1788	1255	1976	0.011662	0.009508	O14	3	632	1.23	0.089	yaaJ	b0007	inner membrane transport protein	Putative transport proteins	"putative transport; Transport of small molecules: Amino acids, amines"
2805	3921	-1.40	-0.145	3363	5705	3363	4534	0.026753	0.025484	P2	2	1256	1.05	0.021	talB	b0008	transaldolase B	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway"
5506	5291	1.04	0.017	7400	5193	5398	6297	0.037154	0.040906	G18	4	2276	-1.10	-0.042	mog	b0009	required for the efficient incorporation of molybdate into molybdoproteins	"Biosynthesis of cofactors, prosthetic groups and carriers"	"transport; Biosynthesis of cofactors, carriers: Molybdopterin"
1682	1655	1.02	0.007	1858	1177	1669	1517	0.008952	0.012645	D17	4	2658	-1.41	-0.150	yaaH	b0010	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1906	2700	-1.42	-0.151	2317	2181	2303	2249	0.013272	0.017450	F19	1	2379	-1.31	-0.119	b0011	b0011	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
963	989	-1.03	-0.012	1501	1374	976	1438	0.008484	0.007393	F1	4	1059	1.15	0.060	htgA	b0012	positive regulator for sigma 32 heat shock promoters	Regulatory function	"regulator; Adaptations, atypical conditions"
1216	1504	-1.24	-0.093	1902	1844	1360	1873	0.011053	0.010305	F17	4	2659	1.07	0.030	yaaI	b0013	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8394	8805	-1.05	-0.021	11956	14178	8599	13067	0.077106	0.065162	H1	4	1060	1.18	0.073	dnaK	b0014	chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteins	Cell processes	factor; Chaperones
2489	2351	1.06	0.025	3059	3625	2420	3342	0.019719	0.018337	J1	4	1061	1.08	0.032	dnaJ	b0015	chaperone with DnaK; heat shock protein	Cell processes	factor; Chaperones
2976	1957	1.52	0.182	5779	4737	2467	5258	0.031027	0.018691	G5	4	308	1.66	0.220	yi81_1	b0016	IS186 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
2252	2735	-1.21	-0.084	3171	3726	2494	3449	0.020349	0.018895	H17	4	2660	1.08	0.032	yi82_1	b0017	IS186 & IS421 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
2422	2525	-1.04	-0.018	3549	3682	2474	3616	0.021334	0.018744	L1	4	1062	1.14	0.056	gef	b0018	Gef protein interferes with membrane function when in excess	Cell processes	membrane; Cell killing
600	552	1.09	0.036	2520	2614	576	2567	0.015146	0.004367	A16	3	633	3.47	0.540	nhaA	b0019	"Na+/H antiporter, pH dependent"	Transport and binding proteins	transport; Transport of small molecules: Cations
554	422	1.11	0.044	1035	1114	488	1075	0.006342	0.003698	C16	3	634	1.72	0.234	nhaR	b0020	transcriptional activator of nhaA	Regulatory function	regulator; Transport of small molecules: Cations
840	957	-1.14	-0.057	655	615	899	635	0.003747	0.006809	I5	4	309	-1.82	-0.259	insB_1	b0021	IS1 protein InsB	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
7473	9785	-1.31	-0.117	13277	12605	8629	12941	0.076363	0.065387	K5	4	310	1.17	0.067	insA_1	b0022	IS1 protein InsA	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1510	1687	-1.12	-0.048	7269	6930	1599	7099	0.041891	0.012114	I9	2	1669	3.46	0.539	rpsT	b0023	30S ribosomal subunit protein S20	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
1263	1247	1.01	0.006	832	1550	1255	1191	0.007027	0.009509	J17	4	2661	-1.35	-0.131	b0024	b0024	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
946	588	1.61	0.206	624	969	767	797	0.004701	0.005812	M19	2	175	-1.24	-0.092	ribF	b0025	putative regulator	Putative regulatory proteins	putative regulator; Not classified
15478	16989	-1.10	-0.040	7795	9019	16233	8407	0.049606	0.123013	K9	2	1670	-2.48	-0.394	ileS	b0026	isoleucine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
348	133	1.00	0.000	719	5	240	362	0.002136	0.001822	E16	3	635	1.00	0.000	lspA	b0027	prolipoprotein signal peptidase (SPase II)	Cell processes	"enzyme; Protein, peptide secretion"
2168	2132	1.02	0.007	2642	2459	2150	2551	0.015051	0.016289	L17	4	2662	-1.08	-0.034	slpA	b0028	probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase (a rotamase)	Putative factors	putative enzyme; Proteins - translation and modification
236	332	-1.00	0.000	271	657	284	464	0.002740	0.002149	C9	2	130	1.00	0.000	lytB	b0029	control of stringent response; involved in penicillin tolerance	Regulatory function	regulator; Global regulatory functions
1357	1503	-1.11	-0.044	1614	1670	1430	1642	0.009689	0.010835	N17	4	2663	-1.12	-0.049	yaaF	b0030	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2628	2603	1.01	0.004	2690	2752	2615	2721	0.016056	0.019819	M7	4	1855	-1.23	-0.091	dapB	b0031	dihydrodipicolinate reductase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Lysine
2925	2816	1.04	0.017	1681	1257	2871	1469	0.008668	0.021752	K16	1	1982	-2.51	-0.400	carA	b0032	"carbamoyl-phosphate synthetase, glutamine (small) subunit"	Nucleotide biosynthesis and metabolism	enzyme; Pyrimidine ribonucleotide biosynthesis
2385	2407	-1.01	-0.004	1714	1499	2396	1607	0.009481	0.018154	M16	1	1983	-1.91	-0.282	carB	b0033	carbamoyl-phosphate synthase large subunit	Nucleotide biosynthesis and metabolism	enzyme; Pyrimidine ribonucleotide biosynthesis
657	718	-1.09	-0.038	375	678	688	527	0.003108	0.005211	N1	4	1063	-1.68	-0.224	caiF	b0034	transcriptional regulator of cai operon	Regulatory function	"regulator; Central intermediary metabolism: Pool, multipurpose conversions"
13734	13573	1.01	0.005	19772	17619	13654	18696	0.110318	0.103463	H4	2	1064	1.07	0.028	caiE	b0035	possible synthesis of cofactor for carnitine racemase and dehydratase	Putative enzymes	"putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
3922	3581	1.10	0.040	11160	11535	3751	11348	0.066958	0.028427	B3	4	1065	2.36	0.372	caiD	b0036	carnitine racemase	Central intermediary metabolism	enzyme; Degradation of small molecules: Amines
751	679	1.11	0.044	1223	1160	715	1192	0.007032	0.005417	D3	4	1066	1.30	0.113	caiC	b0037	probable crotonobetaine/carnitine-CoA ligase	Putative enzymes	"putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
2378	2512	-1.06	-0.024	4947	5756	2445	5351	0.031575	0.018530	F3	4	1067	1.70	0.231	caiB	b0038	l-carnitine dehydratase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
890	661	1.35	0.130	1423	1588	775	1506	0.008884	0.005876	H3	4	1068	1.51	0.180	caiA	b0039	probable carnitine operon oxidoreductase	Putative enzymes	"putative regulator; Central intermediary metabolism: Pool, multipurpose conversions"
3171	2900	1.09	0.039	4123	4193	3036	4158	0.024536	0.023003	J3	4	1069	1.07	0.028	caiT	b0040	probable carnitine transporter	Putative transport proteins	"putative transport; Central intermediary metabolism: Pool, multipurpose conversions"
2838	3170	-1.12	-0.048	4403	4944	3004	4673	0.027577	0.022762	B4	2	1257	1.21	0.083	fixA	b0041	"probable flavoprotein subunit, carnitine metabolism"	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Electron transport"
202	298	-1.00	0.000	371	733	250	552	0.003256	0.001897	D4	2	1258	1.09	0.036	fixB	b0042	"probable flavoprotein subunit, carnitine metabolism"	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Electron transport"
279	304	-1.00	0.000	1182	1038	292	1110	0.006550	0.002210	P17	4	2664	2.18	0.339	fixC	b0043	flavoprotein; electron transport	Putative enzymes	"putative carrier; Energy metabolism, carbon: Electron transport"
129	323	-1.00	0.000	211	465	226	338	0.001993	0.001709	F4	2	1259	1.00	0.000	fixX	b0044	putative ferredoxin	Putative enzymes	putative carrier; Not classified
18966	22918	-1.21	-0.082	33037	30532	20942	31785	0.187551	0.158693	G16	3	636	1.18	0.073	yaaU	b0045	putative transport protein	Putative transport proteins	putative transport; Not classified
4508	4137	1.09	0.037	7744	7399	4322	7572	0.044679	0.032755	H19	1	2380	1.36	0.135	yabF	b0046	putative NAD(P)H oxidoreductase	Putative enzymes	putative enzyme; Not classified
1905	1531	1.24	0.095	3167	2473	1718	2820	0.016641	0.013021	I16	3	637	1.28	0.107	kefC	b0047	"K+ efflux antiporter, glutathione-regulated"	Transport and binding proteins	transport; Transport of small molecules: Cations
1800	2018	-1.12	-0.050	2632	2534	1909	2583	0.015240	0.014468	I18	4	2277	1.05	0.023	folA	b0048	dihydrofolate reductase type I; trimethoprim resistance	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Folic acid"
4578	4239	1.08	0.033	3211	2843	4409	3027	0.017863	0.033408	O16	1	1984	-1.87	-0.272	apaH	b0049	diadenosine tetraphosphatase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
997	971	1.03	0.011	1061	1022	984	1042	0.006146	0.007459	B19	4	2665	-1.21	-0.084	apaG	b0050	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1051	1029	1.02	0.009	1220	1420	1040	1320	0.007791	0.007882	L3	4	1070	-1.01	-0.005	ksgA	b0051	"S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase"	Cell processes	enzyme; Drug/analog sensitivity
3367	2839	1.19	0.074	4134	4008	3103	4071	0.024021	0.023513	K18	4	2278	1.02	0.009	pdxA	b0052	pyridoxine biosynthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridoxine"
1985	1902	1.04	0.019	2610	3177	1943	2893	0.017073	0.014725	L9	4	2630	1.16	0.064	surA	b0053	survival protein	Cell processes	phenotype; Not classified
1539	1486	1.04	0.015	1522	1450	1512	1486	0.008768	0.011459	N3	4	1071	-1.31	-0.116	imp	b0054	organic solvent tolerance	Cell processes	"phenotype; Adaptations, atypical conditions"
1342	1164	1.15	0.062	606	804	1253	705	0.004160	0.009495	D19	4	2666	-2.28	-0.358	yabH	b0055	putative DNA binding protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
4285	4588	-1.07	-0.030	5414	5889	4436	5651	0.033347	0.033618	F19	4	2667	-1.01	-0.004	yabP	b0056	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4696	4769	-1.02	-0.007	5703	4767	4733	5235	0.030892	0.035862	H19	4	2668	-1.16	-0.065	yabQ	b0057	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3085	3442	-1.12	-0.048	4684	4943	3263	4813	0.028403	0.024730	J19	4	2669	1.15	0.060	yabO	b0058	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
915	850	1.08	0.032	1025	844	882	934	0.005513	0.006686	K19	1	1614	-1.21	-0.084	hepA	b0059	probable ATP-dependent RNA helicase	Putative enzymes	"putative enzyme; RNA synthesis, modification, DNA transcription"
3021	3019	1.00	0.000	5738	5404	3020	5571	0.032872	0.022885	F16	4	1499	1.44	0.157	polB	b0060	DNA polymerase II	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
5843	4760	1.23	0.089	12111	11803	5302	11957	0.070556	0.040174	B2	2	1	1.76	0.245	araD	b0061	L-ribulose-5-phosphate 4-epimerase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
296	350	-1.00	0.000	643	627	323	635	0.003748	0.002450	C1	1	2	1.25	0.097	araA	b0062	L-arabinose isomerase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1994	1932	1.03	0.014	2757	2935	1963	2846	0.016793	0.014873	E1	1	3	1.13	0.053	araB	b0063	L-ribulokinase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
504	497	1.01	0.003	737	755	501	746	0.004403	0.003793	G1	1	4	1.16	0.065	araC	b0064	transcriptional regulator for ara operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
790	826	-1.04	-0.019	1205	1296	808	1250	0.007378	0.006124	L19	4	2670	1.20	0.081	yabI	b0065	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
164	235	-1.00	0.000	256	364	200	310	0.001830	0.001514	B13	2	913	1.00	0.000	yabJ	b0066	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
5813	6607	-1.14	-0.056	10388	10236	6210	10312	0.060851	0.047056	D13	2	914	1.29	0.112	yabK	b0067	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1913	2214	-1.16	-0.063	2733	2403	2064	2568	0.015156	0.015637	M18	4	2279	-1.03	-0.014	tbpA	b0068	thiamin-binding periplasmic protein	Putative transport proteins	putative transport; Transport of small molecules: Other
979	1069	-1.09	-0.038	899	955	1024	927	0.005469	0.007761	N19	4	2671	-1.42	-0.152	yabN	b0069	putative transport protein	Putative transport proteins	putative transport; Not classified
6755	7209	-1.07	-0.028	2994	3206	6982	3100	0.018294	0.052910	F13	2	915	-2.89	-0.461	yabM	b0070	putative transport protein	Putative transport proteins	putative transport; Not classified
2284	2508	-1.10	-0.041	4664	4427	2396	4546	0.026822	0.018157	O7	4	1856	1.48	0.169	leuD	b0071	isopropylmalate isomerase subunit	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Leucine
5371	4851	1.11	0.044	6423	5076	5111	5750	0.033927	0.038728	A9	4	1857	-1.14	-0.057	leuC	b0072	3-isopropylmalate isomerase (dehydratase) subunit	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Leucine
3975	3477	1.14	0.058	3881	3613	3726	3747	0.022110	0.028235	C9	4	1858	-1.28	-0.106	leuB	b0073	3-isopropylmalate dehydrogenase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Leucine
5005	5395	-1.08	-0.033	6692	6704	5200	6698	0.039524	0.039404	E9	4	1859	1.00	0.001	leuA	b0074	2-isopropylmalate synthase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Leucine
3589	3740	-1.04	-0.018	8913	7069	3664	7991	0.047151	0.027768	G9	4	1860	1.70	0.230	leuL	b0075	leu operon leader peptide	Amino acid biosynthesis	leader; Amino acid biosynthesis: Leucine
2467	2698	-1.09	-0.039	2320	2954	2582	2637	0.015561	0.019568	I9	4	1861	-1.26	-0.099	leuO	b0076	probable transcriptional activator for leuABCD operon	Putative regulatory proteins	putative regulator; Amino acid biosynthesis: Leucine
4356	4624	-1.06	-0.026	7143	6839	4490	6991	0.041253	0.034024	K9	4	1862	1.21	0.084	ilvI	b0077	"acetolactate synthase III, valine sensitive, large subunit"	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
3140	3579	-1.14	-0.057	3569	3673	3360	3621	0.021366	0.025459	M9	4	1863	-1.19	-0.076	ilvH	b0078	"acetolactate synthase III, valine sensitive, small subunit"	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
42	84	-1.00	0.000	62	66	63	64	0.000376	0.000477	H4	2	1260	-1.00	0.000	fruL	b0079	fruR leader peptide	Energy metabolism	"leader; Energy metabolism, carbon: Glycolysis"
490	429	1.00	0.000	675	1093	459	884	0.005215	0.003482	J4	2	1261	1.50	0.175	fruR	b0080	transcriptional repressor of fru operon and others	Regulatory function	"regulator; Energy metabolism, carbon: Glycolysis"
1486	1190	1.25	0.097	1677	1460	1338	1569	0.009257	0.010138	P19	4	2672	-1.10	-0.039	yabB	b0081	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1185	900	1.32	0.119	2502	2172	1043	2337	0.013790	0.007900	K4	3	590	1.75	0.242	yabC	b0082	putative apolipoprotein	"Hypothetical, unclassified, unknown"	orf; Not classified
686	688	-1.00	-0.002	1247	1318	687	1283	0.007570	0.005206	P3	4	1072	1.45	0.163	ftsL	b0083	cell division protein; ingrowth of wall at septum	Cell processes	phenotype; Cell division
16880	14932	1.13	0.053	28069	20806	15906	24438	0.144200	0.120533	B5	4	1073	1.20	0.078	ftsI	b0084	septum formation; penicillin-binding protein 3; peptidoglycan synthetase	Cell processes	enzyme; Cell division
10835	10861	-1.00	-0.001	29605	27906	10848	28756	0.169678	0.082202	E4	1	395	2.06	0.315	murE	b0085	meso-diaminopimelate-adding enzyme	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
978	1124	-1.15	-0.060	3575	3606	1051	3591	0.021189	0.007964	G4	1	396	2.66	0.425	murF	b0086	D-alanine:D-alanine-adding enzyme	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
2737	2314	1.18	0.073	5545	5697	2526	5621	0.033166	0.019139	I4	1	397	1.73	0.239	mraY	b0087	phospho-N-acetylmuramoyl-pentapeptide transferase?	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
3263	3230	1.01	0.004	6373	7048	3247	6711	0.039598	0.024604	K4	1	398	1.61	0.207	murD	b0088	UDP-N-acetylmuramoylalanine-D-glutamate ligase	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
1343	1372	-1.02	-0.009	2295	2139	1357	2217	0.013083	0.010286	D5	4	1074	1.27	0.104	ftsW	b0089	cell division; membrane protein involved in shape determination	Cell processes	membrane; Cell division
4009	3670	1.09	0.038	42802	33168	3839	37985	0.224138	0.029094	M4	1	399	7.70	0.887	murG	b0090	UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
5362	4973	1.08	0.033	8233	7283	5167	7758	0.045777	0.039158	O4	1	400	1.17	0.068	murC	b0091	"L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase"	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
4979	4648	1.07	0.030	9272	9240	4814	9256	0.054615	0.036476	A6	1	401	1.50	0.175	ddlB	b0092	"D-alanine-D-alanine ligase B, affects cell division"	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
4546	4639	-1.02	-0.009	12747	10476	4593	11612	0.068516	0.034802	F5	4	1075	1.97	0.294	ftsQ	b0093	cell division protein; ingrowth of wall at septum	Cell processes	phenotype; Cell division
1332	1545	-1.16	-0.065	3597	3363	1438	3480	0.020534	0.010900	H5	4	1076	1.88	0.275	ftsA	b0094	"ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes"	Cell processes	phenotype; Cell division
1792	1368	1.31	0.117	3372	2466	1580	2919	0.017223	0.011973	J5	4	1077	1.44	0.158	ftsZ	b0095	cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase	Cell processes	enzyme; Cell division
839	656	1.28	0.107	3870	3304	747	3587	0.021165	0.005664	C6	1	402	3.74	0.573	lpxC	b0096	UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis	Cell structure	enzyme; Surface polysaccharides & antigens
5929	5616	1.06	0.024	5145	5006	5772	5075	0.029947	0.043742	B21	4	2673	-1.46	-0.165	yacA	b0097	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
68	2	1.00	0.000	212	116	35	164	0.000970	0.000264	K16	3	638	1.00	0.000	secA	b0098	preprotein translocase; secretion protein	Transport and binding proteins	"transport; Protein, peptide secretion"
366	423	-1.00	0.000	449	266	395	358	0.002110	0.002990	A18	1	1985	-1.00	0.000	mutT	b0099	"7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions"	Nucleotide biosynthesis and metabolism	enzyme; 2'-Deoxyribonucleotide metabolism
6846	7167	-1.05	-0.020	10468	10870	7007	10669	0.062956	0.053095	D21	4	2674	1.19	0.074	b0100	b0100	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
14031	12919	1.09	0.036	35569	34045	13475	34807	0.205385	0.102111	F21	4	2675	2.01	0.303	yacG	b0101	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5183	4367	1.19	0.074	7076	7382	4775	7229	0.042654	0.036183	H21	4	2676	1.18	0.071	yacF	b0102	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
377	531	-1.06	-0.026	659	864	454	761	0.004493	0.003441	H16	4	1500	1.31	0.116	yacE	b0103	putative DNA repair protein	"Hypothetical, unclassified, unknown"	orf; Not classified
1982	2996	-1.51	-0.179	3602	3236	2489	3419	0.020175	0.018863	C18	1	1986	1.07	0.029	guaC	b0104	GMP reductase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
337	647	-1.29	-0.112	1926	1689	492	1807	0.010665	0.003728	J21	4	2677	2.86	0.456	b0105	b0105	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4137	3844	1.08	0.032	9225	9925	3990	9575	0.056500	0.030239	E6	1	403	1.87	0.271	hofC	b0106	"putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake"	Putative transport proteins	putative transport; Not classified
5421	5438	-1.00	-0.001	12732	12984	5430	12858	0.075870	0.041146	G6	1	404	1.84	0.266	hofB	b0107	"putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake"	Putative transport proteins	putative transport; Not classified
1044	1146	-1.10	-0.040	1389	755	1095	1072	0.006327	0.008296	N9	4	2631	-1.31	-0.118	ppdD	b0108	prelipin peptidase dependent protein	Putative enzymes	putative enzyme; Not classified
655	702	-1.07	-0.030	655	762	678	708	0.004180	0.005141	O18	4	2280	-1.23	-0.090	nadC	b0109	quinolinate phosphoribosyltransferase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide"
2523	2274	1.11	0.045	4820	4693	2399	4756	0.028064	0.018175	L5	4	1078	1.54	0.189	ampD	b0110	regulates ampC	Regulatory function	regulator; Not classified
1924	1954	-1.02	-0.007	2064	1710	1939	1887	0.011135	0.014693	N5	4	1079	-1.32	-0.120	ampE	b0111	regulates ampC	Regulatory function	regulator; Drug/analog sensitivity
1470	1452	1.01	0.005	3285	2603	1461	2944	0.017374	0.011071	M16	3	639	1.57	0.196	aroP	b0112	aromatic amino acid transport protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1714	1944	-1.13	-0.055	730	979	1829	855	0.005043	0.013861	L4	2	1262	-2.75	-0.439	pdhR	b0113	transcriptional regulator for pyruvate dehydrogenase complex	Regulatory function	"regulator; Energy metabolism, carbon: Pyruvate dehydrogenase"
11538	10931	1.06	0.023	6799	7576	11235	7187	0.042409	0.085134	N4	2	1263	-2.01	-0.303	aceE	b0114	pyruvate dehydrogenase (decarboxylase component)	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase"
3748	4319	-1.15	-0.062	4199	4389	4034	4294	0.025338	0.030568	P4	2	1264	-1.21	-0.081	aceF	b0115	pyruvate dehydrogenase (dihydrolipoyltransacetylase component)	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase"
14005	13217	1.06	0.025	14948	17740	13611	16344	0.096440	0.103142	B6	2	1265	-1.07	-0.029	lpdA	b0116	lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase"
3274	3423	-1.05	-0.019	6516	6447	3348	6481	0.038245	0.025373	L21	4	2678	1.51	0.178	yacH	b0117	putative membrane protein	putative membrane protein	putative membrane; Not classified
4270	4213	1.01	0.006	3260	3448	4242	3354	0.019790	0.032141	D6	2	1266	-1.62	-0.211	acnB	b0118	aconitate hydrase B	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
1207	921	1.31	0.117	1454	1836	1064	1645	0.009705	0.008063	N21	4	2679	1.20	0.080	yacL	b0119	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
29286	26740	1.10	0.039	53644	45181	28013	49413	0.291570	0.212274	O18	2	2088	1.37	0.138	speD	b0120	S-adenosylmethionine decarboxylase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Polyamine biosynthesis
1026	1436	-1.40	-0.146	618	1100	1231	859	0.005070	0.009330	A20	2	2089	-1.84	-0.265	speE	b0121	spermidine synthase = putrescine aminopropyltransferase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Polyamine biosynthesis
164	358	-1.00	0.000	188	239	261	213	0.001259	0.001976	H13	2	916	-1.00	0.000	yacC	b0122	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
553	666	-1.20	-0.081	610	423	609	516	0.003047	0.004617	P21	4	2680	-1.52	-0.181	yacK	b0123	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3724	3480	1.07	0.030	5331	5494	3602	5413	0.031940	0.027295	I1	1	5	1.17	0.068	gcd	b0124	glucose dehydrogenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1676	1108	1.51	0.179	2444	2361	1392	2402	0.014174	0.010548	E18	1	1987	1.34	0.128	hpt	b0125	hypoxanthine phosphoribosyltransferase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
6438	5855	1.10	0.041	17290	13616	6146	15453	0.091184	0.046576	J19	1	2381	1.96	0.292	yadF	b0126	putative carbonic anhdrase (EC 4.2.1.1)	Putative enzymes	putative enzyme; Not classified
732	935	-1.28	-0.107	2363	2881	833	2622	0.015472	0.006315	J13	2	917	2.45	0.389	yadG	b0127	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
2763	2364	1.17	0.068	2279	1740	2564	2009	0.011856	0.019426	B23	4	2681	-1.64	-0.214	yadH	b0128	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1132	1142	-1.01	-0.004	2050	2032	1137	2041	0.012042	0.008617	L19	1	2382	1.40	0.145	yadI	b0129	putative PTS enzyme II B component	Putative transport proteins	putative transport; Not classified
2484	2629	-1.06	-0.025	2419	2576	2557	2498	0.014738	0.019374	D23	4	2682	-1.31	-0.119	yadE	b0130	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
868	1110	-1.28	-0.107	718	899	989	808	0.004771	0.007494	A20	4	2281	-1.57	-0.196	panD	b0131	aspartate 1-decarboxylase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pantothenate"
1014	1217	-1.20	-0.079	990	1074	1115	1032	0.006091	0.008451	F23	4	2683	-1.39	-0.142	yadD	b0132	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1580	1587	-1.00	-0.002	1373	1536	1584	1455	0.008583	0.012000	C20	4	2282	-1.40	-0.146	panC	b0133	pantothenate synthetase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pantothenate"
6122	5632	1.09	0.036	8450	8210	5877	8330	0.049153	0.044537	E20	4	2283	1.10	0.043	panB	b0134	3-methyl-2-oxobutanoate hydroxymethyltransferase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pantothenate"
37	112	-1.00	0.000	9	69	75	39	0.000231	0.000566	P5	4	1080	-1.00	0.000	yadC	b0135	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
1719	1738	-1.01	-0.005	2296	2561	1729	2429	0.014331	0.013099	B7	4	1081	1.09	0.039	yadK	b0136	putative fimbrial protein	"Hypothetical, unclassified, unknown"	orf; Not classified
901	758	1.19	0.075	1004	1216	829	1110	0.006551	0.006283	D7	4	1082	1.04	0.018	yadL	b0137	putative fimbrial protein	"Hypothetical, unclassified, unknown"	orf; Not classified
560	759	-1.35	-0.132	645	845	660	745	0.004394	0.005000	F7	4	1083	-1.14	-0.056	yadM	b0138	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
745	793	-1.07	-0.027	504	613	769	558	0.003295	0.005828	I6	1	405	-1.77	-0.248	htrE	b0139	probable outer membrane porin protein involved in fimbrial assembly	putative membrane protein	putative membrane; Surface structures
1265	1332	-1.05	-0.022	4257	3470	1299	3863	0.022796	0.009841	K6	1	406	2.32	0.365	ecpD	b0140	probable pilin chaperone similar to PapD	Putative factors	putative factor; Surface structures
1396	1570	-1.12	-0.051	1956	2206	1483	2081	0.012279	0.011237	H7	4	1084	1.09	0.038	yadN	b0141	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
3703	3871	-1.05	-0.019	4267	4772	3787	4519	0.026666	0.028697	G20	4	2284	-1.08	-0.032	folK	b0142	"7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Folic acid"
3292	3218	1.02	0.010	2318	2590	3255	2454	0.014480	0.024666	M19	1	1615	-1.70	-0.231	pcnB	b0143	poly(A) polymerase I	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
457	486	-1.00	0.000	93	350	471	221	0.001306	0.003571	M9	2	1671	-1.19	-0.076	yadB	b0144	putative tRNA synthetase	Putative enzymes	"putative enzyme; Aminoacyl tRNA synthetases, tRNA modification"
2921	2777	1.05	0.022	7717	8217	2849	7967	0.047011	0.021589	J16	4	1501	2.18	0.338	dksA	b0145	dnaK suppressor protein	"DNA replication, repair, restriction/modification"	"phenotype; DNA - replication, repair, restriction/modification"
1042	466	2.08	0.319	829	739	754	784	0.004625	0.005714	K1	1	6	-1.24	-0.092	sfsA	b0146	probable regulator for maltose metabolism	Putative regulatory proteins	putative regulator; Degradation of small molecules: Carbon compounds
1084	1088	-1.00	-0.002	1212	1513	1086	1362	0.008037	0.008229	H23	4	2684	-1.02	-0.010	yadP	b0147	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2571	2334	1.10	0.042	2697	2650	2453	2674	0.015776	0.018587	O19	1	1616	-1.18	-0.071	hrpB	b0148	"helicase, ATP-dependent"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1358	1111	1.22	0.088	2594	2162	1235	2378	0.014033	0.009355	M6	1	407	1.50	0.176	mrcB	b0149	peptidoglycan synthetase; penicillin-binding protein 1B	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
3595	3128	1.15	0.060	3376	3366	3361	3371	0.019890	0.025472	O6	1	408	-1.28	-0.107	fhuA	b0150	"outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80"	Cell structure	membrane; Outer membrane constituents
594	510	1.16	0.066	692	594	552	643	0.003794	0.004184	O16	3	640	-1.10	-0.043	fhuC	b0151	ATP-binding component of hydroxymate-dependent iron transport	Transport and binding proteins	transport; Transport of small molecules: Cations
761	722	1.05	0.023	1753	1520	741	1637	0.009659	0.005618	A18	3	641	1.72	0.235	fhuD	b0152	"hydroxamate-dependent iron uptake, cytoplasmic membrane component"	Transport and binding proteins	transport; Transport of small molecules: Cations
425	400	1.00	0.000	1018	788	412	903	0.005327	0.003126	C18	3	642	1.70	0.232	fhuB	b0153	"hydroxamate-dependent iron uptake, cytoplasmic membrane component"	Transport and binding proteins	transport; Transport of small molecules: Cations
3283	2838	1.16	0.063	2893	3044	3060	2969	0.017517	0.023191	I20	4	2285	-1.32	-0.122	hemL	b0154	glutamate-1-semialdehyde aminotransferase (aminomutase)	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
1518	1570	-1.03	-0.015	2963	2937	1544	2950	0.017407	0.011700	L13	2	918	1.49	0.173	yadQ	b0155	putative channel transporter	Putative transport proteins	putative transport; Not classified
1599	1829	-1.14	-0.058	2101	2331	1714	2216	0.013077	0.012990	J23	4	2685	1.01	0.003	yadR	b0156	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2638	2699	-1.02	-0.010	3925	4589	2669	4257	0.025119	0.020223	L23	4	2686	1.24	0.094	yadS	b0157	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
355	347	1.00	0.000	313	529	351	421	0.002483	0.002659	N23	4	2687	-1.00	0.000	yadT	b0158	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
628	657	-1.05	-0.020	636	472	642	554	0.003270	0.004867	P23	4	2688	-1.49	-0.173	pfs	b0159	"orf, hypothetical protein"	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
528	451	1.06	0.024	486	553	490	520	0.003067	0.003710	C20	2	2090	-1.21	-0.083	dgt	b0160	deoxyguanosine triphosphate triphosphohydrolase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Nucleotide hydrolysis
3875	4519	-1.17	-0.067	13614	14851	4197	14232	0.083981	0.031804	O9	2	1672	2.64	0.422	htrA	b0161	periplasmic serine protease Do; heat shock protein HtrA	Cell processes	"enzyme; Degradation of proteins, peptides, glyco"
172	272	-1.00	0.000	104	118	222	111	0.000654	0.001682	O19	2	176	-1.00	0.000	yaeG	b0162	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
768	162	1.54	0.186	1331	865	465	1098	0.006477	0.003522	M4	3	591	1.84	0.265	yaeH	b0163	putative structural protein	Putative cell structure	putative structure; Not classified
3037	3233	-1.06	-0.027	4004	4202	3135	4103	0.024209	0.023757	B2	1	2689	1.02	0.008	yaeI	b0164	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
35	130	-1.00	0.000	456	286	82	371	0.002188	0.000623	D2	1	2690	1.00	0.000	b0165	b0165	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1213	1364	-1.12	-0.051	2900	3430	1288	3165	0.018675	0.009764	O9	4	1864	1.91	0.282	dapD	b0166	"2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Lysine
1842	2089	-1.13	-0.055	2158	2400	1966	2279	0.013447	0.014895	A11	4	1865	-1.11	-0.044	glnD	b0167	protein PII; uridylyltransferase acts on regulator of glnA	Regulatory function	enzyme; Amino acid biosynthesis: Glutamine
1060	1122	-1.06	-0.025	965	1044	1091	1004	0.005926	0.008268	A11	2	1673	-1.40	-0.145	map	b0168	methionine aminopeptidase	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
3519	3186	1.10	0.043	5061	5738	3353	5399	0.031859	0.025404	C11	2	1674	1.25	0.098	rpsB	b0169	30S ribosomal subunit protein S2	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
9370	7652	1.22	0.088	3366	3179	8511	3272	0.019309	0.064496	E11	2	1675	-3.34	-0.524	tsf	b0170	protein chain elongation factor EF-Ts	"Translation, post-translational modification"	factor; Proteins - translation and modification
2648	2648	-1.00	0.000	4056	3627	2648	3842	0.022668	0.020065	E20	2	2091	1.13	0.053	pyrH	b0171	uridylate kinase	Nucleotide biosynthesis and metabolism	enzyme; Central intermediary metabolism: Nucleotide interconversions
1346	1340	1.00	0.002	2487	1825	1343	2156	0.012721	0.010177	G11	2	1676	1.25	0.097	frr	b0172	ribosome releasing factor	"Translation, post-translational modification"	factor; Proteins - translation and modification
412	563	-1.13	-0.051	356	582	487	469	0.002767	0.003692	N13	2	919	-1.23	-0.090	yaeM	b0173	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
3017	2776	1.09	0.036	5373	3986	2896	4679	0.027612	0.021949	F2	1	2691	1.26	0.100	yaeS	b0174	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
538	523	1.03	0.012	527	626	530	577	0.003403	0.004019	O6	2	2040	-1.18	-0.072	cdsA	b0175	CDP-diglyceride synthetase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
1527	1548	-1.01	-0.006	2154	1773	1537	1964	0.011587	0.011650	H2	1	2692	-1.01	-0.002	yaeL	b0176	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3223	2611	1.23	0.091	4346	3404	2917	3875	0.022866	0.022104	J2	1	2693	1.03	0.015	yaeT	b0177	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2928	2528	1.16	0.064	7315	7007	2728	7161	0.042255	0.020675	A8	1	409	2.04	0.310	hlpA	b0178	"histone-like protein, located in outer membrane or nucleoid"	"DNA replication, repair, restriction/modification"	"factor; Basic proteins - synthesis, modification"
4041	3721	1.09	0.036	38245	35415	3881	36830	0.217321	0.029410	C8	1	410	7.39	0.869	lpxD	b0179	UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase; third step of endotoxin (lipidA) synthesis	Cell structure	enzyme; Surface polysaccharides & antigens
670	788	-1.17	-0.070	317	853	729	585	0.003454	0.005524	A8	2	2041	-1.60	-0.204	fabZ	b0180	(3R)-hydroxymyristol acyl carrier protein dehydratase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
1867	1712	1.09	0.038	2689	2568	1790	2629	0.015512	0.013563	E8	1	411	1.14	0.058	lpxA	b0181	UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis	Cell structure	enzyme; Surface polysaccharides & antigens
2863	3251	-1.14	-0.055	4189	4484	3057	4337	0.025590	0.023163	G8	1	412	1.10	0.043	lpxB	b0182	"tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step"	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
324	308	1.00	0.000	559	486	316	523	0.003083	0.002394	L16	4	1502	1.03	0.012	rnhB	b0183	"RNAse HII, degrades RNA of DNA-RNA hybrids"	"Transcription, RNA processing and degradation"	enzyme; Degradation of RNA
89	78	1.00	0.000	132	287	84	210	0.001237	0.000634	N16	4	1503	1.00	0.000	dnaE	b0184	"DNA polymerase III, alpha subunit"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1002	1088	-1.09	-0.036	1182	1361	1045	1271	0.007502	0.007917	C8	2	2042	-1.06	-0.023	accA	b0185	"acetylCoA carboxylase, carboxytransferase component, alpha subunit"	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
20	45	-1.00	0.000	-47	156	32	54	0.000320	0.000246	F6	2	1267	1.00	0.000	ldcC	b0186	"lysine decarboxylase 2, constitutive"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase"
420	307	1.00	0.000	989	839	363	914	0.005395	0.002754	L2	1	2694	1.80	0.255	yaeR	b0187	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
808	712	1.13	0.055	1299	1086	760	1192	0.007035	0.005759	J7	4	1085	1.22	0.087	mesJ	b0188	cell cycle protein	Cell processes	orf; Cell division
5263	6002	-1.14	-0.057	6184	6792	5633	6488	0.038284	0.042685	N2	1	2695	-1.11	-0.047	yaeO	b0189	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6191	5825	1.06	0.026	8847	8492	6008	8670	0.051156	0.045530	P2	1	2696	1.12	0.051	yaeQ	b0190	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
236	230	1.00	0.000	139	148	233	143	0.000847	0.001765	B4	1	2697	-1.00	0.000	yaeJ	b0191	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
837	912	-1.09	-0.037	1354	1328	875	1341	0.007912	0.006629	L7	4	1086	1.19	0.077	cutF	b0192	copper homeostasis protein (lipoprotein)	Putative transport proteins	putative transport; Detoxification
334	327	1.00	0.000	284	215	330	249	0.001472	0.002504	D4	1	2698	-1.00	0.000	yaeF	b0193	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1035	1192	-1.15	-0.062	1616	2187	1113	1901	0.011218	0.008437	I11	2	1677	1.33	0.124	proS	b0194	proline tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
305	304	1.00	0.000	483	235	304	359	0.002121	0.002307	F4	1	2699	-1.00	0.000	yaeB	b0195	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1399	1298	1.08	0.033	1935	1763	1349	1849	0.010911	0.010219	I8	1	413	1.07	0.028	rcsF	b0196	regulator in colanic acid synthesis; interacts with RcsB	Regulatory function	regulator; Surface polysaccharides & antigens
3333	2353	1.42	0.151	7404	7450	2843	7427	0.043825	0.021543	K8	1	414	2.03	0.308	yaeC	b0197	putative lipoprotein	putative membrane protein	putative membrane; Not classified
835	548	1.52	0.183	1450	1414	692	1432	0.008451	0.005241	A2	3	577	1.61	0.207	yaeE	b0198	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1538	941	1.64	0.214	1357	1295	1239	1326	0.007823	0.009392	E18	3	643	-1.20	-0.079	abc	b0199	ATP-binding component of a transporter	Putative transport proteins	transport; Not classified
2627	2528	1.04	0.017	10022	9500	2578	9761	0.057596	0.019532	G20	2	2092	2.95	0.470	yaeD	b0200	putative phosphatase	Putative enzymes	putative enzyme; Not classified
440	493	-1.00	0.000	664	628	467	646	0.003812	0.003537	I20	2	2093	1.08	0.033	yafB	b0207	putative aldose reductase (EC 1.1.1.21)	Putative enzymes	putative enzyme; Not classified
2541	2822	-1.11	-0.045	2611	2621	2682	2616	0.015437	0.020320	A21	2	177	-1.32	-0.119	yafC	b0208	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative transport; Not classified
1369	1178	1.16	0.065	1371	1224	1274	1297	0.007655	0.009653	H4	1	2700	-1.26	-0.101	yafD	b0209	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
903	867	1.04	0.018	1251	916	885	1083	0.006393	0.006708	N19	1	2383	-1.05	-0.021	yafE	b0210	putative biotin synthesis protein	Putative enzymes	putative enzyme; Not classified
1413	879	1.61	0.206	3572	2979	1146	3275	0.019327	0.008686	H6	2	1268	2.23	0.347	dniR	b0211	transcriptional regulator for nitrite reductase (cytochrome c552)	Regulatory function	"regulator; Energy metabolism, carbon: Anaerobic respiration"
455	507	-1.01	-0.006	541	502	481	522	0.003077	0.003646	J4	1	2701	-1.18	-0.074	gloB	b0212	probable hydroxyacylglutathione hydrolase	Putative enzymes	"putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
279	314	-1.00	0.000	308	163	296	235	0.001389	0.002244	L4	1	2702	-1.00	0.000	yafS	b0213	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
288	387	-1.00	0.000	719	651	337	685	0.004041	0.002557	P16	4	1504	1.35	0.129	rnhA	b0214	"RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication"	"Transcription, RNA processing and degradation"	enzyme; Degradation of RNA
538	562	-1.05	-0.019	1168	1348	550	1258	0.007424	0.004166	B18	4	1505	1.78	0.251	dnaQ	b0215	"DNA polymerase III, epsilon subunit"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
-99	-1	-1.00	0.000	-53	209	-50	78	0.000463	-0.000381	K20	2	2094	1.00	0.000	yafT	b0217	putative aminopeptidase	Putative enzymes	putative enzyme; Not classified
478	348	1.00	0.000	122	258	413	190	0.001120	0.003130	N4	1	2703	-1.04	-0.018	yafU	b0218	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2505	2220	1.13	0.052	4304	3660	2362	3982	0.023496	0.017900	M20	2	2095	1.31	0.118	yafV	b0219	putative EC 3.5. amidase-type enzyme	Putative enzymes	putative enzyme; Not classified
1203	1036	1.16	0.065	1682	1666	1120	1674	0.009878	0.008485	P4	1	2704	1.16	0.066	ykfE	b0220	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2078	1867	1.11	0.047	2423	1959	1972	2191	0.012929	0.014944	O20	2	2096	-1.16	-0.063	yafH	b0221	putative acyl-CoA dehydrogenase (EC 1.3.99.-)	Putative enzymes	putative enzyme; Not classified
1177	1286	-1.09	-0.039	2581	2308	1232	2444	0.014423	0.009334	M8	1	415	1.55	0.189	gmhA	b0222	phosphoheptose isomerase	Cell structure	enzyme; Surface polysaccharides & antigens
7932	6768	1.17	0.069	10124	10226	7350	10175	0.060041	0.055697	A22	2	2097	1.08	0.033	yafJ	b0223	putative amidotransferase	Putative enzymes	putative enzyme; Not classified
3652	2735	1.34	0.126	3053	2419	3193	2736	0.016146	0.024198	B6	1	2705	-1.50	-0.176	yafK	b0224	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-34	-21	-1.00	0.000	30	-43	-27	-6	-0.000037	-0.000206	D6	1	2706	1.00	0.000	yafQ	b0225	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
569	466	1.14	0.056	1030	884	517	957	0.005647	0.003921	P9	4	2632	1.44	0.158	dinJ	b0226	damage-inducible protein J	Cell processes	phenotype; Not classified
239	311	-1.00	0.000	316	397	275	357	0.002104	0.002081	F6	1	2707	1.00	0.000	yafL	b0227	putative lipoprotein	putative membrane protein	putative membrane; Not classified
1897	1652	1.15	0.060	2535	1548	1774	2041	0.012046	0.013446	H6	1	2708	-1.12	-0.048	yafM	b0228	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
616	552	1.12	0.048	606	733	584	670	0.003951	0.004425	N7	4	1087	-1.12	-0.049	fhiA	b0229	flagellar biosynthesis	Putative factors	putative enzyme; Surface structures
1469	1323	1.11	0.045	1896	1917	1396	1907	0.011251	0.010578	P7	4	1088	1.06	0.027	mbhA	b0230	putative motility protein	Putative cell structure	putative structure; Not classified
957	890	1.08	0.031	921	1203	924	1062	0.006265	0.007000	J6	1	2709	-1.12	-0.048	dinP	b0231	damage-inducible protein P; putative tRNA synthetase	Putative enzymes	putative enzyme; Not classified
94	91	1.00	0.000	224	100	92	162	0.000957	0.000700	L6	1	2710	1.00	0.000	yafN	b0232	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
348	191	1.00	0.000	199	294	269	247	0.001455	0.002041	N6	1	2711	-1.00	0.000	yafO	b0233	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2879	2507	1.15	0.060	2914	3084	2693	2999	0.017694	0.020407	P6	1	2712	-1.15	-0.062	yafP	b0234	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-16	-26	1.00	0.000	66	1	-21	34	0.000198	-0.000157	B8	1	2713	1.00	0.000	b0235	b0235	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
532	615	-1.15	-0.063	703	447	574	575	0.003394	0.004346	K11	2	1678	-1.28	-0.107	prfH	b0236	probable peptide chain release factor	"Translation, post-translational modification"	putative factor; Proteins - translation and modification
2978	2788	1.07	0.029	2992	2954	2883	2973	0.017543	0.021844	M11	2	1679	-1.25	-0.095	pepD	b0237	aminoacyl-histidine dipeptidase (peptidase D)	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
2474	2380	1.04	0.017	3400	2821	2427	3110	0.018354	0.018394	G18	1	1988	-1.00	-0.001	gpt	b0238	guanine-hypoxanthine phosphoribosyltransferase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
1339	1516	-1.13	-0.054	2463	2327	1427	2395	0.014132	0.010816	D8	1	2714	1.31	0.116	yafA	b0239	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2892	2693	1.07	0.031	5620	5143	2792	5381	0.031753	0.021160	O8	1	416	1.50	0.176	crl	b0240	transcriptional regulator of cryptic csgA gene for curli surface fibers	Regulatory function	regulator; Surface structures
297	423	-1.00	0.000	852	692	360	772	0.004554	0.002728	A10	1	417	1.52	0.181	phoE	b0241	"outer membrane pore protein E (E,Ic,NmpAB)"	Cell structure	membrane; Outer membrane constituents
8158	7935	1.03	0.012	6726	5748	8046	6237	0.036802	0.060971	C11	4	1866	-1.66	-0.219	proB	b0242	gamma-glutamate kinase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Proline
2874	3743	-1.30	-0.115	3338	3420	3308	3379	0.019940	0.025071	E11	4	1867	-1.26	-0.099	proA	b0243	gamma-glutamylphosphate reductase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Proline
91	36	1.00	0.000	71	12	64	41	0.000244	0.000483	F8	1	2715	-1.00	0.000	b0245	b0245	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
801	764	1.05	0.021	422	376	783	399	0.002355	0.005933	H8	1	2716	-1.98	-0.296	yafW	b0246	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
306	428	-1.00	0.000	527	586	367	556	0.003282	0.002780	D18	4	1506	1.09	0.039	ykfG	b0247	putative DNA repair protein	Putative enzymes	putative enzyme; Not classified
210	179	1.00	0.000	231	372	195	301	0.001778	0.001475	J8	1	2717	1.00	0.000	yafX	b0248	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
594	453	1.19	0.075	1030	1015	524	1022	0.006031	0.003967	L8	1	2718	1.52	0.182	ykfF	b0249	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1022	1224	-1.20	-0.078	1336	1340	1123	1338	0.007897	0.008509	N8	1	2719	-1.08	-0.032	ykfB	b0250	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
727	692	1.05	0.021	1065	802	709	934	0.005510	0.005375	P8	1	2720	1.03	0.011	yafY	b0251	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
191	149	1.00	0.000	109	139	170	124	0.000732	0.001290	M5	4	311	-1.00	0.000	yafZ	b0252	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
283	246	1.00	0.000	150	144	265	147	0.000868	0.002006	B10	1	2721	-1.00	0.000	ykfA	b0253	putative GTP-binding protein	"Hypothetical, unclassified, unknown"	orf; Not classified
370	342	1.00	0.000	213	383	356	298	0.001756	0.002698	C21	2	178	-1.00	0.000	perR	b0254	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
274	240	1.00	0.000	209	193	257	201	0.001185	0.001947	D10	1	2722	-1.00	0.000	yi91a	b0255	"IS911 hypothetical protein, variant (IS911A)"	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1195	1396	-1.17	-0.067	1638	1591	1296	1615	0.009528	0.009819	O5	4	312	-1.03	-0.013	tra8_1	b0256	IS30 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1773	1645	1.08	0.032	1875	1876	1709	1875	0.011066	0.012951	A7	4	313	-1.17	-0.068	b0257	b0257	putative transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Not classified"
6787	5999	1.13	0.054	9581	9408	6393	9495	0.056026	0.048443	F10	1	2723	1.16	0.063	ykfC	b0258	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8890	8550	1.04	0.017	6227	5955	8720	6091	0.035941	0.066079	C7	4	314	-1.84	-0.264	trs5_1	b0259	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1706	1817	-1.07	-0.027	2517	2717	1762	2617	0.015441	0.013351	C22	2	2098	1.16	0.063	ykfD	b0260	putative amino acid/amine transport protein	Putative transport proteins	putative transport; Not classified
2091	2198	-1.05	-0.022	1940	1869	2144	1904	0.011237	0.016249	C10	1	418	-1.45	-0.160	yagD	b0261	putative enzyme	Putative enzymes	putative enzyme; Not classified
589	711	-1.21	-0.081	1258	1606	650	1432	0.008451	0.004925	E22	2	2099	1.72	0.234	afuC	b0262	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
243	246	-1.00	0.000	603	521	244	562	0.003317	0.001852	P13	2	920	1.11	0.044	b0263	b0263	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1533	1372	1.12	0.048	1035	1193	1453	1114	0.006574	0.011009	E7	4	315	-1.67	-0.224	insB_2	b0264	IS1 protein InsB	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
7316	7563	-1.03	-0.014	18611	21065	7439	19838	0.117057	0.056374	G7	4	316	2.08	0.317	insA_2	b0265	IS1 protein InsA	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
440	538	-1.08	-0.032	215	457	489	336	0.001982	0.003707	H10	1	2724	-1.24	-0.092	yagB	b0266	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1073	1041	1.03	0.013	999	943	1057	971	0.005731	0.008010	J10	1	2725	-1.40	-0.145	yagA	b0267	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
427	536	-1.07	-0.030	874	971	482	923	0.005445	0.003650	G22	2	2100	1.49	0.174	yagE	b0268	putative lyase/synthase	Putative enzymes	putative enzyme; Not classified
4991	4528	1.10	0.042	4879	4684	4760	4781	0.028213	0.036069	G11	4	1868	-1.28	-0.107	yagF	b0269	putative dehydratase	Putative enzymes	putative enzyme; Not classified
836	1014	-1.21	-0.084	2841	2828	925	2835	0.016726	0.007010	M1	1	7	2.39	0.378	yagG	b0270	putative permease	Putative transport proteins	putative transport; Not classified
297	314	-1.00	0.000	387	237	305	312	0.001843	0.002313	O1	1	8	-1.00	0.000	yagH	b0271	putative beta-xylosidase (EC 3.2.1.37)	Putative enzymes	putative enzyme; Not classified
1001	1387	-1.39	-0.141	1785	2254	1194	2020	0.011918	0.009047	E21	2	179	1.32	0.120	yagI	b0272	putative regulator	Putative regulatory proteins	putative regulator; Not classified
6546	7020	-1.07	-0.030	6857	8296	6783	7576	0.044707	0.051402	I11	4	1869	-1.15	-0.061	argF	b0273	"ornithine carbamoyltransferase 2, chain F"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Arginine
1438	1729	-1.20	-0.080	1768	1549	1583	1658	0.009785	0.011997	I7	4	317	-1.23	-0.089	insB_3	b0274	IS1 protein InsB	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
10030	8258	1.21	0.084	15303	14115	9144	14709	0.086793	0.069293	K7	4	318	1.25	0.098	insA_3	b0275	IS1 protein InsA	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
183	175	1.00	0.000	349	154	179	251	0.001484	0.001355	L10	1	2726	1.00	0.000	yagJ	b0276	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
295	304	-1.00	0.000	317	332	299	325	0.001916	0.002269	N10	1	2727	-1.00	0.000	yagK	b0277	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1364	1518	-1.11	-0.046	1913	1851	1441	1882	0.011106	0.010920	G21	2	180	1.02	0.007	yagL	b0278	DNA-binding protein	Putative regulatory proteins	phenotype; Not classified
194	169	1.00	0.000	581	671	181	626	0.003695	0.001374	P10	1	2728	1.23	0.090	yagM	b0279	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
777	691	1.12	0.051	401	332	734	366	0.002162	0.005564	B12	1	2729	-1.85	-0.268	yagN	b0280	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
383	445	-1.00	0.000	534	574	414	554	0.003271	0.003138	M7	4	319	1.04	0.018	intF	b0281	putative phage integrase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Not classified"
2830	3105	-1.10	-0.040	3587	3643	2967	3615	0.021331	0.022487	D12	1	2730	-1.05	-0.023	yagP	b0282	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
1479	1702	-1.15	-0.061	991	1223	1591	1107	0.006533	0.012053	F12	1	2731	-1.84	-0.266	yagQ	b0283	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2045	1897	1.08	0.033	2103	2056	1971	2080	0.012271	0.014936	H12	1	2732	-1.22	-0.085	yagR	b0284	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4651	3864	1.20	0.081	8643	9240	4257	8942	0.052762	0.032262	J12	1	2733	1.64	0.214	yagS	b0285	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4835	4895	-1.01	-0.005	4578	4146	4865	4362	0.025738	0.036866	I22	2	2101	-1.43	-0.156	yagT	b0286	putative xanthine dehydrogenase (EC 1.1.1.20)	Putative enzymes	putative enzyme; Not classified
3055	2851	1.07	0.030	2652	2713	2953	2683	0.015830	0.022376	L12	1	2734	-1.41	-0.150	yagU	b0287	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
172	179	-1.00	0.000	-113	347	175	117	0.000692	0.001329	J6	2	1269	-1.00	0.000	ykgJ	b0288	putative ferredoxin	Putative enzymes	putative carrier; Not classified
1019	1166	-1.14	-0.059	945	1055	1092	1000	0.005900	0.008277	N12	1	2735	-1.40	-0.147	yagV	b0289	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-31	91	-1.00	0.000	-130	98	30	-16	-0.000095	0.000226	I21	2	181	-1.00	0.000	yagW	b0290	putative receptor	Putative factors	putative factor; Not classified
893	878	1.02	0.008	895	814	886	855	0.005042	0.006711	P12	1	2736	-1.33	-0.124	yagX	b0291	putative enzyme	Putative enzymes	putative enzyme; Not classified
438	566	-1.13	-0.054	421	312	502	366	0.002161	0.003806	B14	1	2737	-1.27	-0.103	yagY	b0292	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2254	2321	-1.03	-0.013	2211	1593	2287	1902	0.011224	0.017334	D14	1	2738	-1.54	-0.189	yagZ	b0293	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-33	42	-1.00	0.000	155	77	4	116	0.000682	0.000034	K21	2	182	1.00	0.000	ykgK	b0294	putative regulator	Putative regulatory proteins	putative regulator; Not classified
274	314	-1.00	0.000	228	-61	294	83	0.000491	0.002228	F14	1	2739	-1.00	0.000	ykgL	b0295	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4194	3130	1.34	0.127	22814	22403	3662	22609	0.133407	0.027753	O11	2	1680	4.81	0.682	ykgM	b0296	putative ribosomal protein	Putative cell structure	putative structure; Not classified
858	544	1.58	0.198	826	701	701	764	0.004506	0.005312	O4	3	592	-1.18	-0.072	eaeH	b0297	"attaching and effacing protein, pathogenesis factor"	Cell processes	factor; Not classified
859	862	-1.00	-0.001	2263	2037	860	2150	0.012688	0.006520	H14	1	2740	1.95	0.289	b0298	b0298	putative factor	Putative factors	putative factor; Not classified
837	804	1.04	0.018	1891	1875	820	1883	0.011110	0.006214	O7	4	320	1.79	0.252	tra5_5	b0299	IS3 putative transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1699	1836	-1.08	-0.034	1398	1261	1768	1330	0.007847	0.013395	M21	2	183	-1.71	-0.232	ykgA	b0300	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
238	203	1.00	0.000	69	129	221	99	0.000581	0.001671	J14	1	2741	-1.00	0.000	ykgB	b0301	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
80	48	1.00	0.000	-17	48	64	16	0.000092	0.000485	L14	1	2742	-1.00	0.000	b0302	b0302	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
606	422	1.21	0.084	466	526	514	496	0.002925	0.003897	N14	1	2743	-1.30	-0.114	ykgI	b0303	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1651	1835	-1.11	-0.046	2658	2903	1743	2780	0.016406	0.013208	B9	4	1089	1.24	0.094	ykgC	b0304	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
6203	5771	1.07	0.031	3285	3269	5987	3277	0.019337	0.045368	O21	2	184	-2.35	-0.370	ykgD	b0305	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
445	297	1.00	0.000	560	464	371	512	0.003020	0.002811	P14	1	2744	1.01	0.003	ykgE	b0306	putative dehydrogenase subunit	Putative enzymes	putative enzyme; Not classified
6901	6691	1.03	0.013	7220	7718	6796	7469	0.044072	0.051501	B16	1	2745	-1.17	-0.068	ykgF	b0307	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
143	288	-1.00	0.000	463	852	216	657	0.003878	0.001633	B15	2	921	1.29	0.111	ykgG	b0308	putative transporter	Putative transport proteins	putative transport; Not classified
136	100	1.00	0.000	253	281	118	267	0.001576	0.000897	D16	1	2746	1.00	0.000	b0309	b0309	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
443	387	1.00	0.000	678	564	415	621	0.003665	0.003145	F16	1	2747	1.17	0.066	ykgH	b0310	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2108	1601	1.32	0.119	4231	3587	1855	3909	0.023066	0.014054	D9	4	1090	1.64	0.215	betA	b0311	"choline dehydrogenase, a flavoprotein"	Cell processes	enzyme; Osmotic adaptation
281	271	1.00	0.000	706	561	276	633	0.003737	0.002093	F9	4	1091	1.25	0.095	betB	b0312	NAD+-dependent betaine aldehyde dehydrogenase	Cell processes	enzyme; Osmotic adaptation
481	409	1.00	0.000	596	649	445	623	0.003673	0.003373	H9	4	1092	1.09	0.037	betI	b0313	probably transcriptional repressor of bet genes	Cell processes	putative regulator; Osmotic adaptation
36022	40440	-1.12	-0.050	24620	19066	38231	21843	0.128887	0.289706	G18	3	644	-2.25	-0.352	betT	b0314	high-affinity choline transport	Transport and binding proteins	transport; Transport of small molecules: Other
838	719	1.17	0.067	993	800	778	896	0.005290	0.005898	H16	1	2748	-1.12	-0.047	yahA	b0315	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
857	1020	-1.19	-0.076	342	626	938	484	0.002857	0.007111	A23	2	185	-2.37	-0.375	yahB	b0316	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
1401	1260	1.11	0.046	1612	998	1331	1305	0.007702	0.010082	J16	1	2749	-1.31	-0.117	yahC	b0317	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
388	732	-1.46	-0.166	301	495	560	398	0.002347	0.004247	C23	2	186	-1.42	-0.151	yahD	b0318	putative transcription factor	Putative regulatory proteins	putative regulator; Not classified
547	601	-1.10	-0.040	473	598	574	536	0.003160	0.004350	L16	1	2750	-1.38	-0.139	yahE	b0319	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3296	3023	1.09	0.038	4009	3709	3159	3859	0.022772	0.023941	N16	1	2751	-1.05	-0.022	yahF	b0320	putative oxidoreductase subunit	Putative enzymes	putative enzyme; Not classified
1572	1477	1.06	0.027	3401	3363	1525	3382	0.019954	0.011553	P16	1	2752	1.73	0.237	yahG	b0321	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8150	7649	1.07	0.028	7067	6180	7900	6624	0.039084	0.059862	B18	1	2753	-1.53	-0.185	yahH	b0322	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2301	2089	1.10	0.042	1693	1993	2195	1843	0.010874	0.016633	P19	1	2384	-1.53	-0.185	yahI	b0323	putative kinase (EC 2.7.2.2).	Putative enzymes	putative enzyme; Not classified
20148	18925	1.06	0.027	15331	16953	19536	16142	0.095248	0.148042	B21	1	2385	-1.55	-0.192	yahJ	b0324	putative deaminase	Putative enzymes	putative enzyme; Not classified
6535	6637	-1.02	-0.007	5170	4840	6586	5005	0.029531	0.049908	D21	1	2386	-1.69	-0.228	yahK	b0325	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
1314	1287	1.02	0.009	1300	1390	1300	1345	0.007935	0.009854	D18	1	2754	-1.24	-0.094	yahL	b0326	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
966	943	1.03	0.011	1313	928	955	1121	0.006614	0.007233	F18	1	2755	-1.09	-0.039	yahM	b0327	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
31042	20820	1.49	0.173	56574	58816	25931	57695	0.340439	0.196499	L6	2	1270	1.73	0.239	yahN	b0328	putative cytochrome subunit of dehydrogenase	Putative enzymes	putative enzyme; Not classified
2264	2197	1.03	0.013	9028	5667	2231	7347	0.043354	0.016903	H18	1	2756	2.56	0.409	yahO	b0329	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4879	4026	1.21	0.083	4512	5239	4452	4875	0.028767	0.033738	E23	2	187	-1.17	-0.069	prpR	b0330	regulator for prp operon	Regulatory function	regulator; Not classified
610	781	-1.28	-0.107	893	883	695	888	0.005239	0.005269	K22	2	2102	-1.01	-0.002	prpB	b0331	putative phosphonomutase 2	Putative enzymes	putative enzyme; Not classified
435	430	1.00	0.000	386	397	433	391	0.002309	0.003280	J18	1	2757	-1.09	-0.039	b0332	b0332	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1451	1581	-1.09	-0.037	819	1293	1516	1056	0.006231	0.011487	M22	2	2103	-1.84	-0.266	prpC	b0333	putative citrate synthase; propionate metabolism?	Putative enzymes	putative enzyme; Not classified
1199	1040	1.15	0.062	1331	1407	1120	1369	0.008077	0.008484	L18	1	2758	-1.05	-0.021	prpD	b0334	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3485	3317	1.05	0.021	4207	3659	3401	3933	0.023207	0.025769	N18	1	2759	-1.11	-0.045	prpE	b0335	putative propionyl-CoA synthetase	Putative enzymes	putative enzyme; Not classified
3708	3770	-1.02	-0.007	1897	2677	3739	2287	0.013495	0.028335	I18	3	645	-2.10	-0.322	codB	b0336	cytosine permease/transport	Transport and binding proteins	"transport; Transport of small molecules: Nucleosides, purines, pyrimidines"
1350	1516	-1.12	-0.050	1100	955	1433	1028	0.006063	0.010857	I18	1	1989	-1.79	-0.253	codA	b0337	cytosine deaminase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
1298	1374	-1.06	-0.025	2427	2601	1336	2514	0.014835	0.010123	A3	1	9	1.47	0.166	cynR	b0338	cyn operon positive regulator	Regulatory function	"regulator; Central intermediary metabolism: Pool, multipurpose conversions"
2665	2496	1.07	0.028	3964	3021	2580	3492	0.020608	0.019553	O22	2	2104	1.05	0.023	cynT	b0339	carbonic anhydrase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
97	16	1.00	0.000	178	69	56	123	0.000729	0.000426	L6	2	2105	1.00	0.000	cynS	b0340	"cyanate aminohydrolase, cyanase"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
1955	1840	1.06	0.026	2657	2097	1897	2377	0.014026	0.014378	K18	3	646	-1.03	-0.011	cynX	b0341	cyanate transport	Transport and binding proteins	transport; Transport of small molecules: Anions
324	393	-1.00	0.000	967	849	358	908	0.005356	0.002716	C3	1	10	1.79	0.252	lacA	b0342	thiogalactoside acetyltransferase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
7583	8577	-1.13	-0.054	4892	4843	8080	4868	0.028723	0.061229	M18	3	647	-2.13	-0.329	lacY	b0343	galactoside permease (M protein)	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
146	109	1.00	0.000	240	298	127	269	0.001587	0.000964	E3	1	11	1.00	0.000	lacZ	b0344	beta-D-galactosidase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1981	2107	-1.06	-0.027	4812	4153	2044	4482	0.026449	0.015492	G3	1	12	1.71	0.232	lacI	b0345	transcriptional repressor of the lac operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
783	963	-1.23	-0.090	1265	1624	873	1445	0.008526	0.006617	G23	2	188	1.29	0.110	mhpR	b0346	transcriptional regulator for mhp operon	Regulatory function	regulator; Not classified
1115	889	1.25	0.098	1235	810	1002	1022	0.006033	0.007593	P18	1	2760	-1.26	-0.100	mhpA	b0347	3-(3-hydroxyphenyl)propionate hydroxylase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
346	342	1.00	0.000	575	514	344	545	0.003214	0.002607	I3	1	13	1.07	0.030	mhpB	b0348	"2,3-dihydroxyphenylpropionate 1,2-dioxygenase"	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
293	295	-1.00	0.000	338	439	294	389	0.002294	0.002226	K3	1	14	1.00	0.000	mhpC	b0349	"2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase"	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
3109	3177	-1.02	-0.009	2403	3112	3143	2757	0.016270	0.023817	F21	1	2387	-1.46	-0.165	mhpD	b0350	2-keto-4-pentenoate hydratase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
3422	3193	1.07	0.030	4990	4189	3307	4589	0.027080	0.025063	M3	1	15	1.08	0.034	mhpF	b0351	acetaldehyde dehydrogenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
802	743	1.08	0.034	1153	812	773	983	0.005798	0.005854	O3	1	16	-1.01	-0.004	mhpE	b0352	4-hydroxy-2-ketovalerate aldolase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
320	792	-1.58	-0.200	1276	2086	556	1681	0.009919	0.004214	D15	2	922	2.35	0.372	mhpT	b0353	putative transport protein	Putative transport proteins	putative transport; Not classified
3810	3760	1.01	0.006	3376	4228	3785	3802	0.022433	0.028685	F18	4	1507	-1.28	-0.107	yaiL	b0354	nucleoprotein/polynucleotide-associated enzyme	Putative enzymes	putative enzyme; Not classified
178	938	-1.88	-0.273	723	820	558	771	0.004552	0.004227	C24	2	2106	1.08	0.032	yaiM	b0355	putative esterase (EC 3.1.1.1)	Putative enzymes	putative enzyme; Not classified
1583	1390	1.14	0.057	1810	1924	1487	1867	0.011018	0.011265	N6	2	1271	-1.02	-0.010	adhC	b0356	"alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent"	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
479	195	1.00	0.000	559	129	337	344	0.002029	0.002552	A6	3	593	-1.00	0.000	yaiN	b0357	putative alpha helix chain	"Hypothetical, unclassified, unknown"	phenotype; Not classified
1532	1973	-1.29	-0.110	1729	1605	1752	1667	0.009837	0.013279	B20	1	2761	-1.35	-0.130	yaiO	b0358	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
924	879	1.05	0.022	952	714	902	833	0.004914	0.006833	D20	1	2762	-1.39	-0.143	b0359	b0359	putative transferase	Putative enzymes	putative enzyme; Not classified
14499	15261	-1.05	-0.022	24851	22332	14880	23592	0.139208	0.112757	F20	1	2763	1.23	0.092	yi21_1	b0360	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
5183	5578	-1.08	-0.032	3639	4313	5381	3976	0.023462	0.040772	A21	1	1617	-1.74	-0.240	yi22_1	b0361	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
2243	2109	1.06	0.027	3006	2919	2176	2963	0.017481	0.016489	H20	1	2764	1.06	0.025	b0362	b0362	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
239	162	1.00	0.000	444	337	200	391	0.002306	0.001518	E10	1	419	1.00	0.000	yaiP	b0363	polysaccharide metabolism	Putative enzymes	putative enzyme; Not classified
612	584	1.05	0.021	462	489	598	475	0.002806	0.004531	J20	1	2765	-1.51	-0.179	yaiS	b0364	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
91	299	-1.00	0.000	514	790	195	652	0.003846	0.001475	F15	2	923	1.28	0.108	tauA	b0365	taurine transport system periplasmic protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1562	1710	-1.09	-0.039	1679	1934	1636	1806	0.010658	0.012400	E24	2	2107	-1.16	-0.066	tauB	b0366	taurine ATP-binding component of a transport system	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1258	1904	-1.51	-0.180	2932	3604	1581	3268	0.019285	0.011983	H15	2	924	1.61	0.207	tauC	b0367	taurine transport system permease protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
653	582	1.12	0.050	715	459	618	587	0.003461	0.004681	L20	1	2766	-1.35	-0.131	tauD	b0368	"taurine dioxygenase, 2-oxoglutarate-dependent"	Putative enzymes	putative enzyme; Not classified
469	363	1.00	0.000	330	276	416	303	0.001789	0.003151	K20	4	2286	-1.05	-0.021	hemB	b0369	5-aminolevulinate dehydratase = porphobilinogen synthase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
76	56	1.00	0.000	207	95	66	151	0.000890	0.000498	N20	1	2767	1.00	0.000	b0370	b0370	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5958	5410	1.10	0.042	7298	8343	5684	7821	0.046148	0.043074	P20	1	2768	1.07	0.030	yaiT	b0371	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3569	3736	-1.05	-0.020	7853	8092	3652	7972	0.047042	0.027676	A9	4	321	1.70	0.230	tra5_1	b0372	IS3 putative transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
63	47	1.00	0.000	139	23	55	81	0.000478	0.000416	B22	1	2769	1.00	0.000	b0373	b0373	putative factor	Putative factors	putative factor; Not classified
851	531	1.60	0.204	868	600	691	734	0.004331	0.005236	H21	1	2388	-1.21	-0.082	yaiU	b0374	putative flagellin structural protein	Putative cell structure	putative structure; Not classified
1130	924	1.22	0.087	417	440	1027	428	0.002528	0.007783	D22	1	2770	-2.59	-0.414	yaiV	b0375	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1329	1160	1.15	0.059	989	1285	1245	1137	0.006711	0.009431	F22	1	2771	-1.41	-0.148	yaiH	b0376	putative enzyme	Putative enzymes	putative enzyme; Not classified
316	568	-1.14	-0.055	617	829	442	723	0.004265	0.003347	J9	4	1093	1.27	0.105	sbmA	b0377	"sensitivity to microcin B17, possibly envelop protein"	Putative factors	putative membrane; Drug/analog sensitivity
4526	4698	-1.04	-0.016	4268	3549	4612	3909	0.023063	0.034950	H22	1	2772	-1.52	-0.181	yaiW	b0378	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
658	447	1.32	0.119	417	371	553	394	0.002325	0.004189	J22	1	2773	-1.40	-0.145	b0379	b0379	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2224	2304	-1.04	-0.015	794	965	2264	879	0.005188	0.017153	L22	1	2774	-3.31	-0.519	b0380	b0380	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
287	394	-1.00	0.000	554	511	341	533	0.003143	0.002582	G10	1	420	1.05	0.020	ddlA	b0381	D-alanine-D-alanine ligase A	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
828	901	-1.09	-0.037	1423	1271	864	1347	0.007951	0.006551	N22	1	2775	1.21	0.084	yaiB	b0382	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
205	542	-1.08	-0.035	283	766	374	525	0.003097	0.002833	G24	2	2108	1.03	0.014	phoA	b0383	alkaline phosphatase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Phosphorus compounds
885	1093	-1.24	-0.092	2292	1851	989	2072	0.012225	0.007493	I24	2	2109	1.63	0.213	psiF	b0384	induced by phosphate starvation	Cell processes	phenotype; Central intermediary metabolism: Phosphorus compounds
882	830	1.06	0.026	678	675	856	677	0.003993	0.006490	P22	1	2776	-1.63	-0.211	yaiC	b0385	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3078	3694	-1.20	-0.079	3475	3554	3386	3514	0.020736	0.025659	K11	4	1870	-1.24	-0.093	proC	b0386	pyrroline-5-carboxylate reductase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Proline
1530	1304	1.17	0.069	5082	4798	1417	4940	0.029151	0.010738	B24	1	2777	2.71	0.434	yaiI	b0387	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3421	3763	-1.10	-0.041	5422	6418	3592	5920	0.034933	0.027216	M11	4	1871	1.28	0.108	aroL	b0388	shikimate kinase II	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Chorismate
3131	3035	1.03	0.014	5590	5059	3083	5324	0.031416	0.023361	D24	1	2778	1.34	0.129	yaiA	b0389	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8013	6742	1.19	0.075	8918	8957	7377	8938	0.052738	0.055905	O11	4	1872	-1.06	-0.025	aroM	b0390	"protein of aro operon, regulated by aroR"	Amino acid biosynthesis	phenotype; Amino acid biosynthesis: Chorismate
1319	1297	1.02	0.008	2101	2127	1308	2114	0.012476	0.009911	F24	1	2779	1.26	0.100	yaiE	b0391	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4279	3641	1.18	0.070	6371	6775	3960	6573	0.038786	0.030009	H24	1	2780	1.29	0.111	b0392	b0392	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3499	3630	-1.04	-0.016	6425	6000	3565	6213	0.036659	0.027012	J24	1	2781	1.36	0.133	yaiD	b0393	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
815	792	1.03	0.012	800	982	804	891	0.005258	0.006091	L24	1	2782	-1.16	-0.064	yajF	b0394	possible NAGC-like transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
514	435	1.03	0.012	254	411	475	333	0.001963	0.003596	N24	1	2783	-1.20	-0.079	b0395	b0395	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1955	1741	1.12	0.050	3230	2454	1848	2842	0.016770	0.014004	A5	1	17	1.20	0.078	araJ	b0396	involved in either transport or processing of arabinose polymers	Transport and binding proteins	transport; Degradation of small molecules: Carbon compounds
1656	1447	1.14	0.059	1487	1506	1552	1496	0.008829	0.011758	C21	1	1618	-1.33	-0.124	sbcC	b0397	ATP-dependent dsDNA exonuclease	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
4219	4395	-1.04	-0.018	6568	6638	4307	6603	0.038961	0.032637	E21	1	1619	1.19	0.077	sbcD	b0398	ATP-dependent dsDNA exonuclease	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
123	210	-1.00	0.000	173	159	167	166	0.000978	0.001264	E9	2	131	-1.00	0.000	phoB	b0399	"positive response regulator for pho regulon, sensor is PhoR (or CreC)"	Regulatory function	regulator; Global regulatory functions
405	673	-1.35	-0.129	457	470	539	463	0.002733	0.004085	G9	2	132	-1.36	-0.134	phoR	b0400	positive and negative sensor protein for pho regulon	Regulatory function	enzyme; Global regulatory functions
1093	1025	1.07	0.028	1365	1638	1059	1501	0.008858	0.008025	O18	3	648	1.10	0.043	brnQ	b0401	branched chain amino acid transport system II carrier protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1898	1962	-1.03	-0.014	2288	2218	1930	2253	0.013294	0.014625	J8	2	2784	-1.10	-0.041	proY	b0402	proline permease transport protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
461	397	1.00	0.000	1106	582	429	844	0.004982	0.003251	C5	1	18	1.53	0.185	malZ	b0403	maltodextrin glucosidase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
251	127	1.00	0.000	589	396	189	492	0.002906	0.001429	I10	1	421	1.00	0.000	yajB	b0404	putative glycoprotein	"Hypothetical, unclassified, unknown"	orf; Not classified
5433	6610	-1.22	-0.085	10133	12132	6022	11132	0.065689	0.045630	A13	2	1681	1.44	0.158	queA	b0405	synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
686	933	-1.36	-0.133	1349	1716	810	1532	0.009042	0.006134	C13	2	1682	1.47	0.168	tgt	b0406	tRNA-guanine transglycosylase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
2576	2416	1.07	0.028	3635	3558	2496	3597	0.021224	0.018915	B2	2	2785	1.12	0.050	yajC	b0407	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1466	1190	1.23	0.090	2947	2199	1328	2573	0.015182	0.010063	A20	3	649	1.51	0.179	secD	b0408	"protein secretion; membrane protein, part of the channel"	Transport and binding proteins	"transport; Protein, peptide secretion"
379	177	1.00	0.000	844	521	278	682	0.004026	0.002108	C20	3	650	1.34	0.128	secF	b0409	"protein secretion, membrane protein"	Transport and binding proteins	"transport; Protein, peptide secretion"
4337	4259	1.02	0.008	7547	4721	4298	6134	0.036196	0.032570	D2	2	2786	1.11	0.046	yajD	b0410	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1973	1756	1.12	0.051	1288	1174	1864	1231	0.007263	0.014129	E20	3	651	-1.95	-0.289	tsx	b0411	nucleoside channel; receptor of phage T6 and colicin K	Transport and binding proteins	"transport; Transport of small molecules: Nucleosides, purines, pyrimidines"
555	483	1.11	0.045	433	549	519	491	0.002897	0.003932	F2	2	2787	-1.31	-0.118	yajI	b0412	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3430	3573	-1.04	-0.018	3677	4298	3502	3988	0.023529	0.026536	H2	2	2788	-1.13	-0.052	ybaD	b0413	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2364	2044	1.16	0.063	1477	1793	2204	1635	0.009647	0.016703	M20	4	2287	-1.73	-0.238	ribD	b0414	bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Riboflavin"
2726	3122	-1.15	-0.059	4273	4439	2924	4356	0.025704	0.022155	O20	4	2288	1.16	0.065	ribH	b0415	"riboflavin synthase, beta chain"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Riboflavin"
889	1032	-1.16	-0.065	1258	925	960	1092	0.006442	0.007276	G21	1	1620	-1.13	-0.053	nusB	b0416	transcription termination; L factor	"Transcription, RNA processing and degradation"	"factor; RNA synthesis, modification, DNA transcription"
256	523	-1.05	-0.019	483	698	389	590	0.003483	0.002950	I23	2	189	1.16	0.065	thiL	b0417	thiamin-monophosphate kinase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thiamin"
3351	3509	-1.05	-0.020	4340	3016	3430	3678	0.021701	0.025991	J2	2	2789	-1.20	-0.078	pgpA	b0418	phosphatidylglycerophosphatase	Fatty acid and phospholipid metabolism	"enzyme; Macromolecule synthesis, modification: Phospholipids"
1112	1452	-1.31	-0.116	2169	1781	1282	1975	0.011654	0.009716	K24	2	2110	1.20	0.079	yajO	b0419	putative NAD(P)H-dependent xylose reductase	Putative enzymes	putative enzyme; Not classified
1433	1247	1.15	0.061	2020	2202	1340	2111	0.012456	0.010154	J21	1	2389	1.23	0.089	dxs	b0420	1-deoxyxylulose-5-phosphate synthase; flavoprotein	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
3029	2963	1.02	0.010	2073	2012	2996	2042	0.012052	0.022701	A22	4	2289	-1.88	-0.275	ispA	b0421	geranyltranstransferase (farnesyldiphosphate synthase)	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
659	513	1.28	0.109	647	403	586	525	0.003097	0.004441	I21	1	1621	-1.43	-0.157	xseB	b0422	"exonuclease VII, small subunit"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
860	1105	-1.29	-0.109	1690	1232	983	1461	0.008620	0.007446	L2	2	2790	1.16	0.064	yajK	b0423	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
245	399	-1.00	0.000	636	545	322	590	0.003483	0.002441	N2	2	2791	1.16	0.065	thiJ	b0424	4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Biotin"
971	1209	-1.25	-0.095	1058	1370	1090	1214	0.007163	0.008261	P2	2	2792	-1.15	-0.062	apbA	b0425	"involved in thiamin biosynthesis, alternative pyrimidine biosynthesis"	"Biosynthesis of cofactors, prosthetic groups and carriers"	phenotype; Not classified
1261	1460	-1.16	-0.064	2980	2322	1360	2651	0.015642	0.010308	B4	2	2793	1.52	0.181	yajQ	b0426	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
580	672	-1.16	-0.064	933	889	626	911	0.005376	0.004747	L9	4	1094	1.13	0.054	yajR	b0427	putative transport protein	Putative transport proteins	putative transport; Not classified
9166	8138	1.13	0.052	10069	9746	8652	9908	0.058462	0.065560	P6	2	1272	-1.12	-0.050	cyoE	b0428	protoheme IX farnesyltransferase (haeme O biosynthesis)	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
1798	1873	-1.04	-0.018	3377	3373	1835	3375	0.019915	0.013909	B8	2	1273	1.43	0.156	cyoD	b0429	cytochrome o ubiquinol oxidase subunit IV	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
1895	1792	1.06	0.024	3339	3210	1844	3274	0.019320	0.013971	D8	2	1274	1.38	0.141	cyoC	b0430	cytochrome o ubiquinol oxidase subunit III	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
4349	3878	1.12	0.050	8059	8806	4114	8432	0.049756	0.031174	F8	2	1275	1.60	0.203	cyoB	b0431	cytochrome o ubiquinol oxidase subunit I	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
2964	2799	1.06	0.025	3739	4968	2882	4354	0.025690	0.021836	H8	2	1276	1.18	0.071	cyoA	b0432	cytochrome o ubiquinol oxidase subunit II	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
409	622	-1.24	-0.095	397	592	515	495	0.002919	0.003905	N9	4	1095	-1.30	-0.114	ampG	b0433	regulates beta-lactamase synthesis	Regulatory function	regulator; Drug/analog sensitivity
2006	2332	-1.16	-0.065	2126	1777	2169	1952	0.011515	0.016439	L21	1	2390	-1.43	-0.155	yajG	b0434	putative polymerase/proteinase	Putative enzymes	putative enzyme; Not classified
2745	2445	1.12	0.050	6093	6080	2595	6086	0.035914	0.019662	K10	1	422	1.83	0.262	bolA	b0435	possible regulator of murein genes	Cell processes	"putative regulator; Murein sacculus, peptidoglycan"
2788	2634	1.06	0.025	4107	4135	2711	4121	0.024315	0.020544	P9	4	1096	1.18	0.073	tig	b0436	trigger factor; a molecular chaperone involved in cell division	Cell processes	factor; Cell division
-4235	1029	-2.06	-0.313	-3948	2646	-1603	-651	-0.003839	-0.012148	E13	2	1683	1.00	0.000	clpP	b0437	"ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5"	Cell processes	"enzyme; Degradation of proteins, peptides, glyco"
3515	3694	-1.05	-0.022	6742	7246	3604	6994	0.041269	0.027314	G13	2	1684	1.51	0.179	clpX	b0438	"ATP-dependent specificity component of clpP serine protease, chaperone"	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
6042	6477	-1.07	-0.030	13487	13302	6259	13394	0.079034	0.047432	I9	2	133	1.67	0.222	lon	b0439	"DNA-binding, ATP-dependent protease La; heat shock K-protein"	Regulatory function	enzyme; Global regulatory functions
3943	4114	-1.04	-0.018	9777	9617	4028	9697	0.057219	0.030526	H18	4	1508	1.87	0.273	hupB	b0440	"DNA-binding protein HU-beta, NS1 (HU-1)"	"DNA replication, repair, restriction/modification"	"factor; Basic proteins - synthesis, modification"
2892	4532	-1.57	-0.195	2757	3895	3712	3326	0.019627	0.028126	I13	2	1685	-1.43	-0.156	ybaU	b0441	putative protease maturation protein	Putative factors	putative factor; Not classified
468	786	-1.57	-0.196	226	607	627	417	0.002458	0.004750	D4	2	2794	-1.58	-0.200	ybaV	b0442	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1268	1124	1.13	0.053	3130	3078	1196	3104	0.018317	0.009062	F4	2	2795	2.02	0.306	ybaW	b0443	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1655	1704	-1.03	-0.013	2568	2284	1680	2426	0.014316	0.012729	H4	2	2796	1.12	0.051	ybaX	b0444	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2684	2143	1.25	0.098	1390	2388	2413	1889	0.011147	0.018289	J4	2	2797	-1.64	-0.215	ybaE	b0445	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
549	378	1.10	0.040	684	1438	463	1061	0.006260	0.003510	L4	2	2798	1.78	0.251	cof	b0446	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
789	590	1.34	0.127	220	416	690	318	0.001876	0.005225	K23	2	190	-1.74	-0.241	ybaO	b0447	putative LRP-like transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1991	2560	-1.29	-0.109	5209	5012	2275	5110	0.030154	0.017240	G20	3	652	1.75	0.243	mdlA	b0448	ATP-binding component of a transport system	Putative transport proteins	transport; Not classified
1431	1391	1.03	0.012	2126	2148	1411	2137	0.012610	0.010696	I20	3	653	1.18	0.072	mdlB	b0449	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
392	746	-1.49	-0.174	113	504	569	309	0.001821	0.004310	M24	2	2111	-1.44	-0.157	glnK	b0450	nitrogen regulatory protein P-II 2	Regulatory function	"regulator; Central intermediary metabolism: Pool, multipurpose conversions"
34874	32878	1.06	0.026	12724	13907	33876	13316	0.078571	0.256704	O24	2	2112	-3.27	-0.514	amtB	b0451	probable ammonium transporter	Putative transport proteins	"putative transport; Central intermediary metabolism: Pool, multipurpose conversions"
637	842	-1.32	-0.121	1034	726	740	880	0.005193	0.005605	E8	2	2043	-1.08	-0.033	tesB	b0452	acyl-CoA thioesterase II	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
783	696	1.13	0.051	1049	851	740	950	0.005606	0.005607	M10	1	423	-1.00	0.000	ybaY	b0453	glycoprotein/polysaccharide metabolism	Putative factors	phenotype; Not classified
1100	1295	-1.18	-0.071	850	859	1198	855	0.005043	0.009077	N4	2	2799	-1.80	-0.255	ybaZ	b0454	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1806	1880	-1.04	-0.017	2372	1444	1843	1908	0.011260	0.013965	P4	2	2800	-1.24	-0.093	ybaA	b0456	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1412	1247	1.13	0.054	3136	3680	1330	3408	0.020108	0.010076	B6	2	2801	2.00	0.300	ylaB	b0457	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1173	787	1.49	0.173	741	657	980	699	0.004125	0.007427	D6	2	2802	-1.80	-0.255	ylaC	b0458	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
247	412	-1.00	0.000	196	349	330	273	0.001610	0.002498	F6	2	2803	-1.00	0.000	ylaD	b0459	putative transferase	Putative enzymes	putative enzyme; Not classified
493	656	-1.31	-0.118	624	443	575	534	0.003148	0.004354	K13	2	1686	-1.38	-0.141	hha	b0460	haemolysin expression modulating protein	Regulatory function	regulator; Proteins - translation and modification
1089	1552	-1.43	-0.154	496	1070	1321	783	0.004621	0.010010	H6	2	2804	-2.17	-0.336	ybaJ	b0461	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
543	484	1.09	0.036	691	776	513	734	0.004330	0.003888	B11	4	1097	1.11	0.047	acrB	b0462	acridine efflux pump	Cell processes	transport; Drug/analog sensitivity
1214	848	1.43	0.156	1293	1049	1031	1171	0.006909	0.007813	O10	1	424	-1.13	-0.053	acrA	b0463	acridine efflux pump	Cell processes	transport; Drug/analog sensitivity
1546	1845	-1.19	-0.077	1345	1738	1695	1542	0.009099	0.012847	D11	4	1098	-1.41	-0.150	acrR	b0464	acrAB operon repressor	Regulatory function	regulator; Drug/analog sensitivity
7159	6510	1.10	0.041	8611	8593	6835	8602	0.050757	0.051793	C6	3	594	-1.02	-0.009	aefA	b0465	putative alpha helix protein	"Hypothetical, unclassified, unknown"	orf; Not classified
8089	7526	1.07	0.031	13526	11838	7808	12682	0.074831	0.059166	J6	2	2805	1.26	0.102	ybaM	b0466	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1866	2495	-1.34	-0.126	4049	4875	2180	4462	0.026330	0.016520	J18	4	1509	1.59	0.202	priC	b0467	primosomal replication protein N''	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
352	276	1.00	0.000	619	612	314	615	0.003630	0.002378	C9	4	322	1.21	0.083	ybaN	b0468	putative gene 58	"Hypothetical, unclassified, unknown"	orf; Not classified
1118	805	1.39	0.143	1032	887	961	959	0.005660	0.007286	K18	1	1990	-1.29	-0.110	apt	b0469	adenine phosphoribosyltransferase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
902	1051	-1.17	-0.066	1061	1225	976	1143	0.006745	0.007398	L18	4	1510	-1.10	-0.040	dnaX	b0470	"DNA polymerase III, tau and gamma subunits; DNA elongation factor III"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1503	1830	-1.22	-0.086	3468	3230	1667	3349	0.019761	0.012629	L6	2	2806	1.56	0.194	ybaB	b0471	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2049	1960	1.05	0.019	2209	2141	2004	2175	0.012835	0.015188	N18	4	1511	-1.18	-0.073	recR	b0472	recombination and repair	"DNA replication, repair, restriction/modification"	"putative enzyme; DNA - replication, repair, restriction/modification"
2188	1995	1.10	0.040	3053	2675	2092	2864	0.016901	0.015850	F11	4	1099	1.07	0.028	htpG	b0473	"chaperone Hsp90, heat shock protein C 62.5"	Cell processes	factor; Chaperones
4407	3698	1.19	0.076	4787	4228	4053	4507	0.026596	0.030709	M18	1	1991	-1.15	-0.062	adk	b0474	adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
2786	2934	-1.05	-0.023	1993	1934	2860	1963	0.011584	0.021674	C22	4	2290	-1.87	-0.272	hemH	b0475	ferrochelatase: final enzyme of heme biosynthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
136	189	-1.00	0.000	123	463	163	293	0.001729	0.001232	G8	2	2044	1.00	0.000	ybaC	b0476	putative lipase  (EC 3.1.1.-)	"Hypothetical, unclassified, unknown"	orf; Not classified
2154	1250	1.72	0.236	2199	1309	1702	1754	0.010349	0.012898	O18	1	1992	-1.25	-0.096	gsk	b0477	inosine-guanosine kinase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
5949	5201	1.14	0.058	7215	7845	5575	7530	0.044434	0.042247	K20	3	654	1.05	0.022	ybaL	b0478	putative transport protein	Putative transport proteins	putative transport; Not classified
576	747	-1.30	-0.113	754	547	661	650	0.003837	0.005011	H11	4	1100	-1.31	-0.116	fsr	b0479	fosmidomycin resistance protein	Putative transport proteins	putative transport; Not classified
13733	12250	1.12	0.050	14439	12790	12991	13615	0.080336	0.098445	A2	3	2113	-1.23	-0.088	ushA	b0480	UDP-sugar hydrolase (5'-nucleotidase)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
2224	1880	1.18	0.073	1787	1702	2052	1744	0.010293	0.015550	N6	2	2807	-1.51	-0.179	ybaK	b0481	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3324	3189	1.04	0.018	3424	3157	3257	3290	0.019415	0.024677	C2	3	2114	-1.27	-0.104	ybaP	b0482	putative ligase	Putative enzymes	putative enzyme; Not classified
1961	2011	-1.03	-0.011	2898	3244	1986	3071	0.018121	0.015047	P6	2	2808	1.20	0.081	ybaQ	b0483	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1408	1095	1.29	0.109	1257	1247	1252	1252	0.007389	0.009486	M20	3	655	-1.28	-0.109	ybaR	b0484	putative ATPase	Putative enzymes	putative enzyme; Not classified
1576	1419	1.11	0.045	2726	2066	1498	2396	0.014136	0.011349	N21	1	2391	1.25	0.095	ybaS	b0485	putative glutaminase	Putative enzymes	putative enzyme; Not classified
700	868	-1.24	-0.093	1199	1442	784	1321	0.007792	0.005943	J15	2	925	1.31	0.118	ybaT	b0486	putative amino acid/amine transport protein	Putative transport proteins	putative transport; Not classified
1966	1768	1.11	0.046	2136	2430	1867	2283	0.013471	0.014150	J11	4	1101	-1.05	-0.021	ybbI	b0487	putative transcriptional regulator	Putative transport proteins	putative transport; Not classified
228	198	1.00	0.000	102	250	213	176	0.001039	0.001614	B8	2	2809	-1.00	0.000	ybbJ	b0488	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
715	806	-1.13	-0.052	1681	1553	760	1617	0.009542	0.005761	C2	3	578	1.66	0.219	ybbK	b0489	putative protease	Putative enzymes	putative enzyme; Not classified
768	526	1.46	0.165	824	1080	647	952	0.005619	0.004904	L15	2	926	1.15	0.059	ybbL	b0490	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
853	852	1.00	0.000	974	1602	852	1288	0.007598	0.006457	N15	2	927	1.18	0.071	ybbM	b0491	putative metal resistance protein	Putative transport proteins	putative transport; Drug/analog sensitivity
629	578	1.09	0.037	1128	1133	603	1130	0.006669	0.004570	J8	2	1277	1.46	0.164	ybbN	b0492	putative thioredoxin-like protein	Putative enzymes	putative enzyme; Not classified
2256	1864	1.21	0.083	2496	1770	2060	2133	0.012586	0.015611	P21	1	2392	-1.24	-0.094	ybbO	b0493	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
317	411	-1.00	0.000	-83	363	364	140	0.000828	0.002758	I8	2	2045	-1.00	0.000	tesA	b0494	acyl-CoA thioesterase I; also functions as protease I	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
10433	8818	1.18	0.073	7903	6539	9626	7221	0.042607	0.072941	O20	3	656	-1.71	-0.233	ybbA	b0495	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
6692	6916	-1.03	-0.014	4173	3703	6804	3938	0.023238	0.051557	B23	1	2393	-2.22	-0.346	ybbP	b0496	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
9730	10126	-1.04	-0.017	6085	7023	9928	6554	0.038674	0.075230	D8	2	2810	-1.95	-0.289	rhsD	b0497	rhsD protein in rhs element	"Hypothetical, unclassified, unknown"	orf; Transposon-related functions
94	112	-1.00	0.000	174	156	103	165	0.000975	0.000781	F8	2	2811	1.00	0.000	ybbC	b0498	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
475	412	1.00	0.000	222	560	443	391	0.002305	0.003359	H8	2	2812	-1.12	-0.049	b0499	b0499	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
769	722	1.07	0.027	1070	1182	745	1126	0.006644	0.005649	J8	2	2813	1.18	0.070	ybbD	b0500	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
295	211	1.00	0.000	145	296	253	220	0.001300	0.001918	L8	2	2814	-1.00	0.000	b0501	b0501	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3542	3879	-1.10	-0.040	2249	1984	3711	2116	0.012488	0.028117	N8	2	2815	-2.25	-0.352	b0502	b0502	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1191	1009	1.18	0.072	2548	2332	1100	2440	0.014399	0.008334	E6	3	595	1.73	0.237	ybbB	b0503	putative capsule anchoring protein	Cell structure	phenotype; Surface polysaccharides & antigens
78	165	-1.00	0.000	88	290	122	189	0.001115	0.000921	M23	2	191	1.00	0.000	ybbS	b0504	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
3747	3695	1.01	0.006	3188	3255	3721	3221	0.019007	0.028196	P8	2	2816	-1.48	-0.171	ybbT	b0505	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2184	2213	-1.01	-0.006	956	1209	2199	1082	0.006387	0.016660	O23	2	192	-2.61	-0.416	ybbU	b0506	putative regulator	Putative regulatory proteins	putative regulator; Not classified
1553	1178	1.32	0.120	3225	1947	1366	2586	0.015260	0.010350	E2	3	2115	1.47	0.169	gcl	b0507	glyoxylate carboligase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
1435	887	1.62	0.209	1686	1029	1161	1358	0.008012	0.008797	G2	3	2116	-1.10	-0.041	gip	b0508	glyoxylate-induced protein	Central intermediary metabolism	phenotype; Not classified
229	254	-1.00	0.000	217	218	242	217	0.001282	0.001831	D23	1	2394	-1.00	0.000	ybbQ	b0509	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
604	453	1.21	0.082	294	237	529	266	0.001568	0.004007	B10	2	2817	-1.34	-0.126	ybbV	b0510	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2318	2785	-1.20	-0.080	1637	1545	2552	1591	0.009387	0.019337	P15	2	928	-2.06	-0.314	ybbW	b0511	putative transport protein	Putative transport proteins	putative transport; Not classified
2247	1633	1.38	0.139	3128	3834	1940	3481	0.020540	0.014699	I2	3	2117	1.40	0.145	ybbX	b0512	putative hydrolase	Putative enzymes	putative enzyme; Not classified
2543	2634	-1.04	-0.015	1302	2257	2588	1779	0.010498	0.019614	B17	2	929	-1.87	-0.271	ybbY	b0513	putative transport	Putative transport proteins	putative transport; Not classified
451	284	1.00	0.000	456	519	367	487	0.002875	0.002782	D10	2	2818	1.00	0.000	ybbZ	b0514	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1039	1272	-1.22	-0.088	1119	1632	1155	1375	0.008115	0.008755	F10	2	2819	-1.08	-0.033	ylbA	b0515	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1476	1579	-1.07	-0.029	1273	1077	1527	1175	0.006933	0.011574	F23	1	2395	-1.67	-0.223	ylbB	b0516	putative hydantoin utilization protein	Putative enzymes	phenotype; Not classified
2496	3431	-1.37	-0.138	2674	5059	2963	3866	0.022815	0.022457	K2	3	2118	1.02	0.007	ylbC	b0517	putative malate dehydrogenase (EC 1.1.1.37)	Putative enzymes	putative enzyme; Not classified
1056	931	1.13	0.054	575	638	994	607	0.003579	0.007529	H23	1	2396	-2.10	-0.323	fdrA	b0518	involved in protein transport; multicopy suppressor of dominant negative ftsH mutants	Putative transport proteins	"transport; Protein, peptide secretion"
604	550	1.10	0.041	1107	1269	577	1188	0.007009	0.004373	H10	2	2820	1.60	0.205	ylbE	b0519	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
157	97	1.00	0.000	322	316	127	319	0.001883	0.000961	J23	1	2397	1.00	0.000	ylbF	b0520	putative carboxylase	Putative enzymes	putative enzyme; Not classified
965	876	1.10	0.042	1765	1529	920	1647	0.009717	0.006972	M2	3	2119	1.39	0.144	arcC	b0521	putative carbamate kinase (EC 2.7.2.2)	Putative enzymes	putative enzyme; Not classified
2861	2669	1.07	0.030	2497	2225	2765	2361	0.013932	0.020951	A20	1	1993	-1.50	-0.177	purK	b0522	"phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit"	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
1536	1130	1.36	0.133	1272	1147	1333	1210	0.007138	0.010102	C20	1	1994	-1.42	-0.151	purE	b0523	"phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunit"	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
725	1053	-1.45	-0.162	884	1123	889	1003	0.005920	0.006739	J10	2	2821	-1.14	-0.056	ybbF	b0524	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2990	3347	-1.12	-0.049	5814	5296	3168	5555	0.032778	0.024009	M13	2	1687	1.37	0.135	ppiB	b0525	peptidyl-prolyl cis-trans isomerase B (rotamase B)	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
1748	1857	-1.06	-0.026	5480	5305	1803	5393	0.031820	0.013661	O13	2	1688	2.33	0.367	cysS	b0526	cysteine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
2251	2139	1.05	0.022	1963	2039	2195	2001	0.011807	0.016631	L10	2	2822	-1.41	-0.149	ybcI	b0527	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1285	1086	1.18	0.073	1055	1034	1186	1044	0.006163	0.008983	N10	2	2823	-1.46	-0.164	ybcJ	b0528	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2546	2789	-1.10	-0.040	2004	1936	2667	1970	0.011626	0.020212	E22	4	2291	-1.74	-0.240	folD	b0529	"5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Folic acid"
371	274	1.00	0.000	534	467	322	501	0.002954	0.002441	L11	4	1102	1.00	0.000	sfmA	b0530	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
129	46	1.00	0.000	27	99	88	63	0.000373	0.000665	N24	1	1247	-1.00	0.000	sfmC	b0531	putative chaperone	Putative factors	putative factor; Not classified
1028	1141	-1.11	-0.045	2444	2555	1084	2499	0.014747	0.008217	A12	1	425	1.79	0.254	sfmD	b0532	"putative outer membrane protein, export function"	putative membrane protein	putative membrane; Not classified
1110	1146	-1.03	-0.014	950	765	1128	857	0.005059	0.008548	N11	4	1103	-1.69	-0.228	sfmH	b0533	involved in fimbrial asembly	Cell processes	phenotype; Not classified
213	204	1.00	0.000	352	162	208	257	0.001519	0.001579	P11	4	1104	-1.00	0.000	sfmF	b0534	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
63	54	1.00	0.000	106	-56	58	25	0.000148	0.000442	C12	1	426	-1.00	0.000	fimZ	b0535	fimbrial Z protein; probable signal transducer	Putative regulatory proteins	putative regulator; Surface structures
779	862	-1.11	-0.044	572	846	821	709	0.004183	0.006220	E9	4	323	-1.49	-0.172	intD	b0537	prophage DLP12 integrase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
588	450	1.18	0.071	863	732	519	798	0.004706	0.003933	F2	2	193	1.20	0.078	b0538	b0538	putative sensory transduction regulator	Putative regulatory proteins	putative regulator; Not classified
688	856	-1.24	-0.095	1760	1617	772	1688	0.009963	0.005846	G9	4	324	1.70	0.231	b0539	b0539	putative exonuclease (EC 3.1.11.3) similar to lambda	Putative enzymes	putative enzyme; Not classified
1304	902	1.44	0.160	1787	2343	1103	2065	0.012187	0.008359	P10	2	2824	1.46	0.164	b0540	b0540	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
704	734	-1.04	-0.018	1985	1879	719	1932	0.011398	0.005447	I9	4	325	2.09	0.321	tra5_2	b0541	IS3 putative transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
219	180	1.00	0.000	230	253	200	242	0.001426	0.001513	B12	2	2825	-1.00	0.000	b0542	b0542	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
693	755	-1.09	-0.037	629	546	724	588	0.003468	0.005484	D12	2	2826	-1.58	-0.199	emrE	b0543	methylviologen resistance	Cell processes	transport; Drug/analog sensitivity
372	410	-1.00	0.000	166	391	391	279	0.001645	0.002961	F12	2	2827	-1.00	0.000	ybcK	b0544	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
9	122	-1.00	0.000	53	168	66	111	0.000652	0.000497	H12	2	2828	1.00	0.000	ybcL	b0545	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-288	546	-1.09	-0.038	-281	554	129	136	0.000804	0.000975	A15	2	1689	-1.00	0.000	ybcM	b0546	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
8868	8880	-1.00	-0.001	10628	10653	8874	10640	0.062786	0.067245	J12	2	2829	-1.07	-0.030	ybcN	b0547	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
16016	17210	-1.07	-0.031	16751	17260	16613	17006	0.100345	0.125888	L12	2	2830	-1.25	-0.098	ninE	b0548	similar to phage 82 and lambda proteins	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
21546	20689	1.04	0.018	19667	17244	21118	18456	0.108901	0.160025	N12	2	2831	-1.47	-0.167	ybcO	b0549	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
704	1033	-1.47	-0.166	818	731	869	775	0.004571	0.006582	P12	2	2832	-1.44	-0.158	rus	b0550	endodeoxyribonuclease RUS (Holliday junction resolvase)	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
120	189	-1.00	0.000	57	251	155	154	0.000911	0.001173	B14	2	2833	-1.00	0.000	ybcQ	b0551	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6697	7510	-1.12	-0.050	4070	3961	7104	4016	0.023695	0.053829	K9	4	326	-2.27	-0.356	trs5_2	b0552	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
3985	5219	-1.31	-0.117	4476	5347	4602	4911	0.028980	0.034872	M9	4	327	-1.20	-0.080	nmpC	b0553	outer membrane porin protein; locus of qsr prophage	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
4521	4219	1.07	0.030	2880	4024	4370	3452	0.020371	0.033114	D14	2	2834	-1.63	-0.211	ybcR	b0554	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
910	835	1.09	0.037	1054	996	873	1025	0.006048	0.006613	F14	2	2835	-1.09	-0.039	ybcS	b0555	bacteriophage lambda lysozyme homolog	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
425	276	1.00	0.000	238	252	351	245	0.001445	0.002657	H14	2	2836	-1.00	0.000	ybcT	b0556	bacteriophage lambda endopeptidase homolog	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
517	480	1.03	0.014	451	582	498	517	0.003049	0.003777	J14	2	2837	-1.24	-0.093	ybcU	b0557	bacteriophage lambda Bor protein homolog	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
115	235	-1.00	0.000	626	511	175	568	0.003352	0.001325	E12	1	427	1.12	0.048	ybcV	b0558	putative an envelop protein	Putative cell structure	putative structure; Not classified
2407	2307	1.04	0.018	1671	2075	2357	1873	0.011051	0.017863	L14	2	2838	-1.62	-0.209	ybcW	b0559	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
85	149	-1.00	0.000	141	173	117	157	0.000927	0.000888	O9	4	328	1.00	0.000	nohB	b0560	bacteriophage DNA packaging protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
758	664	1.14	0.057	1074	889	711	981	0.005791	0.005389	N14	2	2839	1.07	0.031	ybcX	b0561	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1000	1189	-1.19	-0.075	721	963	1095	842	0.004968	0.008294	P14	2	2840	-1.67	-0.223	ybcY	b0562	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-80	400	-1.00	0.000	-17	400	160	191	0.001130	0.001210	B16	2	2841	-1.00	0.000	ylcE	b0563	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1260	1295	-1.03	-0.012	2190	2593	1278	2391	0.014111	0.009682	O2	3	2120	1.46	0.164	appY	b0564	regulatory protein affecting appA and other genes	Regulatory function	"regulator; Central intermediary metabolism: Pool, multipurpose conversions"
30018	25339	1.18	0.074	23840	18568	27678	21204	0.125117	0.209740	G12	1	428	-1.68	-0.224	ompT	b0565	"outer membrane protein 3b (a), protease VII"	Cell structure	enzyme; Outer membrane constituents
583	305	1.17	0.066	1688	1363	444	1526	0.009003	0.003363	I12	1	429	2.68	0.428	envY	b0566	envelope protein; thermoregulation of porin biosynthesis	Cell processes	structural component; Outer membrane constituents
3406	3405	1.00	0.000	3884	3474	3405	3679	0.021709	0.025805	D16	2	2842	-1.19	-0.075	ybcH	b0567	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4350	4249	1.02	0.010	3697	3505	4300	3601	0.021249	0.032581	A11	4	329	-1.53	-0.186	nfrA	b0568	"bacteriophage N4 receptor, outer membrane protein"	"Phage, transposon, or plasmid"	membrane; Phage-related functions and prophages
1424	1521	-1.07	-0.029	2497	1706	1472	2102	0.012402	0.011158	C11	4	330	1.11	0.046	nfrB	b0569	"bacteriophage N4 receptor, outer membrane protein"	"Phage, transposon, or plasmid"	membrane; Phage-related functions and prophages
694	729	-1.05	-0.022	861	983	712	922	0.005440	0.005393	C1	3	194	1.01	0.004	ybcZ	b0570	putative 2-component sensor protein	Putative regulatory proteins	putative regulator; Not classified
2123	2024	1.05	0.021	3508	3427	2073	3468	0.020461	0.015712	E1	3	195	1.30	0.115	ylcA	b0571	putative 2-component transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
81	723	-1.45	-0.160	68	605	402	337	0.001986	0.003048	D17	2	930	-1.02	-0.007	ylcB	b0572	putative resistance protein	Putative transport proteins	putative transport; Drug/analog sensitivity
658	898	-1.36	-0.135	494	378	778	436	0.002573	0.005895	F16	2	2843	-1.97	-0.293	ylcC	b0573	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
741	1638	-2.21	-0.345	1498	2051	1189	1775	0.010473	0.009014	F17	2	931	1.16	0.065	ylcD	b0574	putative resistance protein	Putative transport proteins	putative transport; Drug/analog sensitivity
7045	6209	1.13	0.055	4278	4610	6627	4444	0.026222	0.050218	H17	2	932	-1.92	-0.282	ybdE	b0575	putative inner membrane component for iron transport	Putative transport proteins	putative transport; Not classified
308	34	1.00	0.000	419	-157	171	131	0.000773	0.001298	A22	3	657	-1.00	0.000	pheP	b0576	phenylalanine-specific transport system	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1939	1982	-1.02	-0.009	4033	5977	1960	5005	0.029533	0.014855	J17	2	933	1.99	0.298	ybdG	b0577	putative transport	Putative transport proteins	putative transport; Not classified
602	652	-1.08	-0.035	895	786	627	841	0.004961	0.004750	B13	4	1105	1.04	0.019	nfnB	b0578	oxygen-insensitive NAD(P)H nitroreductase	Cell processes	enzyme; Drug/analog sensitivity
626	739	-1.18	-0.072	1910	1898	683	1904	0.011234	0.005172	H16	2	2844	2.17	0.337	ybdF	b0579	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
465	502	-1.00	-0.002	535	637	483	586	0.003460	0.003663	J16	2	2845	-1.06	-0.025	ybdJ	b0580	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1467	1614	-1.10	-0.041	2315	2318	1540	2316	0.013668	0.011673	L16	2	2846	1.17	0.069	ybdK	b0581	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2147	2319	-1.08	-0.033	2170	2024	2233	2097	0.012375	0.016921	E11	4	331	-1.37	-0.136	yi81_2	b0582	IS186 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
2062	1679	1.23	0.089	1900	1633	1870	1766	0.010423	0.014173	G22	4	2292	-1.36	-0.133	entD	b0583	"enterochelin synthetase, component D"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Enterochelin"
5245	4964	1.06	0.024	8307	8820	5105	8564	0.050533	0.038681	C22	3	658	1.31	0.116	fepA	b0584	outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D	Transport and binding proteins	membrane; Transport of small molecules: Cations
2094	2459	-1.17	-0.070	2826	3219	2277	3023	0.017835	0.017251	E22	3	659	1.03	0.014	fes	b0585	enterochelin esterase	Transport and binding proteins	enzyme; Transport of small molecules: Cations
554	668	-1.21	-0.081	1114	1810	611	1462	0.008626	0.004632	I22	4	2293	1.86	0.270	entF	b0586	ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F)	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Enterochelin"
3125	2588	1.21	0.082	1454	1397	2856	1425	0.008411	0.021645	G22	3	660	-2.57	-0.411	fepE	b0587	ferric enterobactin (enterochelin) transport	Transport and binding proteins	transport; Transport of small molecules: Cations
608	379	1.22	0.085	804	869	494	836	0.004936	0.003740	I22	3	661	1.32	0.120	fepC	b0588	ATP-binding component of ferric enterobactin transport	Transport and binding proteins	transport; Transport of small molecules: Cations
531	353	1.06	0.026	608	521	442	564	0.003330	0.003347	K22	3	662	-1.01	-0.002	fepG	b0589	ferric enterobactin transport protein	Transport and binding proteins	transport; Transport of small molecules: Cations
2451	2381	1.03	0.013	2614	2318	2416	2466	0.014553	0.018308	M22	3	663	-1.26	-0.100	fepD	b0590	ferric enterobactin (enterochelin) transport	Transport and binding proteins	transport; Transport of small molecules: Cations
1102	1089	1.01	0.005	2787	2892	1095	2839	0.016754	0.008301	L17	2	934	2.02	0.305	ybdA	b0591	putative transport	Putative transport proteins	putative transport; Not classified
802	800	1.00	0.001	1008	848	801	928	0.005477	0.006068	O22	3	664	-1.11	-0.044	fepB	b0592	ferric enterobactin (enterochelin) binding protein; periplasmic component	Transport and binding proteins	transport; Transport of small molecules: Cations
3896	3317	1.17	0.070	3259	4108	3606	3683	0.021735	0.027327	K22	4	2294	-1.26	-0.099	entC	b0593	"isochorismate hydroxymutase 2, enterochelin biosynthesis"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Enterochelin"
3106	2788	1.11	0.047	3915	3426	2947	3670	0.021658	0.022332	M22	4	2295	-1.03	-0.013	entE	b0594	"2,3-dihydroxybenzoate-AMP ligase"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Enterochelin"
2153	2114	1.02	0.008	3239	3639	2133	3439	0.020292	0.016167	O22	4	2296	1.26	0.099	entB	b0595	"2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Enterochelin"
8610	7637	1.13	0.052	9584	9309	8124	9447	0.055742	0.061561	P6	2	2297	-1.10	-0.043	entA	b0596	"2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Enterochelin"
2275	2550	-1.12	-0.049	3753	5120	2413	4437	0.026179	0.018282	N16	2	2847	1.43	0.156	ybdB	b0597	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8911	8583	1.04	0.016	17066	16561	8747	16814	0.099212	0.066283	P16	2	2848	1.50	0.175	cstA	b0598	carbon starvation protein	Cell processes	phenotype; Global regulatory functions
1909	2069	-1.08	-0.035	2084	1908	1989	1996	0.011778	0.015073	A4	3	2121	-1.28	-0.107	ybdH	b0599	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
1490	1483	1.00	0.002	1668	1811	1486	1739	0.010264	0.011261	C4	3	2122	-1.10	-0.040	ybdL	b0600	putative aminotransferase	Putative enzymes	putative enzyme; Not classified
4391	4231	1.04	0.016	3604	5145	4311	4375	0.025813	0.032668	B18	2	2849	-1.27	-0.102	ybdM	b0601	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1138	1108	1.03	0.011	685	815	1123	750	0.004425	0.008510	D18	2	2850	-1.92	-0.284	ybdN	b0602	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
147	94	1.00	0.000	80	-153	121	-37	-0.000216	0.000914	G1	3	196	-1.00	0.000	ybdO	b0603	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
406	239	1.00	0.000	385	453	322	419	0.002472	0.002444	L8	2	1278	1.00	0.000	dsbG	b0604	thiol:disulfide interchange protein	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
6541	5955	1.10	0.041	12564	12114	6248	12339	0.072810	0.047346	D13	4	1106	1.54	0.187	ahpC	b0605	"alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides"	Cell processes	enzyme; Detoxification
1240	1328	-1.07	-0.030	1786	1736	1284	1761	0.010393	0.009729	F13	4	1107	1.07	0.029	ahpF	b0606	"alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides"	Cell processes	enzyme; Detoxification
2522	1947	1.30	0.112	2205	2100	2234	2153	0.012701	0.016930	F18	2	2851	-1.33	-0.125	ybdQ	b0607	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
9392	8720	1.08	0.032	21368	27903	9056	24636	0.145368	0.068625	E4	3	2123	2.12	0.326	ybdR	b0608	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
181	249	-1.00	0.000	290	256	215	273	0.001611	0.001629	H18	2	2852	-1.00	0.000	b0609	b0609	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1530	1502	1.02	0.008	2174	1274	1516	1724	0.010174	0.011490	G4	3	2124	-1.13	-0.053	rnk	b0610	regulator of nucleoside diphosphate kinase	Regulatory function	regulator; Central intermediary metabolism: Nucleotide interconversions
331	386	-1.00	0.000	511	547	359	529	0.003121	0.002719	P18	4	1512	1.04	0.017	rna	b0611	"RNase I, cleaves phosphodiester bond between any two nucleotides"	"Transcription, RNA processing and degradation"	enzyme; Degradation of RNA
577	551	1.05	0.020	945	1042	564	994	0.005864	0.004275	K12	1	430	1.37	0.137	ybdS	b0612	putative a membrane protein	putative membrane protein	putative membrane; Not classified
557	629	-1.13	-0.053	582	684	593	633	0.003733	0.004491	J18	2	2853	-1.20	-0.080	citG	b0613	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
903	761	1.19	0.074	649	1072	832	861	0.005078	0.006303	L18	2	2854	-1.24	-0.094	ybdU	b0614	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
751	659	1.14	0.057	570	722	705	646	0.003811	0.005341	L23	1	2398	-1.40	-0.147	citF	b0615	citrate lyase alpha chain	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
938	1120	-1.19	-0.077	1243	1083	1029	1163	0.006860	0.007800	N23	1	2399	-1.14	-0.056	citE	b0616	citrate lyase beta chain  (acyl lyase subunit)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
2147	1878	1.14	0.058	3511	3867	2013	3689	0.021766	0.015251	N8	2	1279	1.43	0.154	citD	b0617	citrate lyase acyl carrier protein (gamma chain)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
639	641	-1.00	-0.001	529	616	640	572	0.003377	0.004847	P23	1	2400	-1.44	-0.157	citC	b0618	citrate lyase synthetase (citrate (pro-3S)-lyase ligase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
324	211	1.00	0.000	815	498	268	657	0.003875	0.002027	I1	3	197	1.29	0.111	citA	b0619	putative sensor-type protein	Putative regulatory proteins	putative regulator; Not classified
192	174	1.00	0.000	242	206	183	224	0.001323	0.001384	K1	3	198	-1.00	0.000	citB	b0620	sequence similarity to Shigella regulator	Putative regulatory proteins	putative regulator; Not classified
3049	2879	1.06	0.025	5954	4712	2964	5333	0.031469	0.022460	N18	2	2855	1.40	0.146	dcuC	b0621	transport of dicarboxylates	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2783	2887	-1.04	-0.016	3625	3104	2835	3365	0.019853	0.021480	P18	2	2856	-1.08	-0.034	crcA	b0622	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1793	2145	-1.20	-0.078	5377	5236	1969	5307	0.031312	0.014918	B11	4	2633	2.10	0.322	cspE	b0623	cold shock protein	Cell processes	phenotype; Not classified
2097	1929	1.09	0.036	1137	1312	2013	1224	0.007224	0.015251	B20	2	2857	-2.11	-0.325	crcB	b0624	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1341	1770	-1.32	-0.120	1738	2539	1556	2139	0.012619	0.011788	D20	2	2858	1.07	0.030	ybeH	b0625	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
349	275	1.00	0.000	420	343	312	381	0.002251	0.002366	B1	2	2401	-1.00	0.000	ybeM	b0626	putative amidase	Putative enzymes	putative enzyme; Not classified
1045	1131	-1.08	-0.034	1379	1554	1088	1466	0.008653	0.008242	F20	2	2859	1.05	0.021	ybeC	b0627	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6246	6657	-1.07	-0.028	3116	3843	6451	3479	0.020530	0.048887	C24	4	2298	-2.38	-0.377	lipA	b0628	"lipoate synthesis, sulfur insertion?"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"putative enzyme; Biosynthesis of cofactors, carriers: Lipoate"
166	212	-1.00	0.000	205	250	189	227	0.001340	0.001429	H20	2	2860	-1.00	0.000	ybeF	b0629	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
3417	3464	-1.01	-0.006	3149	2960	3441	3054	0.018022	0.026074	E24	4	2299	-1.45	-0.160	lipB	b0630	protein of lipoate biosynthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Lipoate"
460	354	1.00	0.000	588	561	407	575	0.003391	0.003085	J20	2	2861	1.10	0.041	ybeD	b0631	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1546	1395	1.11	0.044	9960	9902	1470	9931	0.058601	0.011142	M12	1	431	5.26	0.721	dacA	b0632	"D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5"	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
747	858	-1.15	-0.060	1394	1369	803	1382	0.008152	0.006084	E2	3	579	1.34	0.127	rlpA	b0633	a minor lipoprotein	Cell structure	"membrane; Macromolecule synthesis, modification: Lipoprotein"
2520	2566	-1.02	-0.008	4638	3206	2543	3922	0.023144	0.019269	O12	1	432	1.20	0.080	mrdB	b0634	rod shape-determining membrane protein; sensitivity to radiation and drugs	Cell processes	phenotype; Cell division
2742	2545	1.08	0.032	5868	6184	2644	6026	0.035555	0.020033	A14	1	433	1.77	0.249	mrdA	b0635	"cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2"	Cell processes	enzyme; Cell division
228	408	-1.00	0.000	109	306	318	208	0.001224	0.002412	L20	2	2862	-1.00	0.000	ybeA	b0636	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
349	548	-1.10	-0.040	218	637	449	427	0.002521	0.003399	N20	2	2863	-1.13	-0.054	ybeB	b0637	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2982	2967	1.01	0.002	3248	2993	2974	3120	0.018413	0.022540	G24	4	2300	-1.22	-0.088	phpB	b0638	"homolog of Salmonella cobC, a phosphohistidine protein"	Putative regulatory proteins	"putative regulator; Biosynthesis of cofactors, carriers: Cobalamin"
1446	1563	-1.08	-0.034	510	825	1504	668	0.003940	0.011399	P20	2	2864	-2.89	-0.461	ybeN	b0639	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
52974	47435	1.12	0.048	54934	54628	50205	54781	0.323248	0.380438	B20	4	1513	-1.18	-0.071	holA	b0640	"DNA polymerase III, delta subunit"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1021	1017	1.00	0.002	1748	1430	1019	1589	0.009376	0.007721	C14	1	434	1.21	0.084	rlpB	b0641	a minor lipoprotein	Cell structure	"membrane; Macromolecule synthesis, modification: Lipoprotein"
1969	2118	-1.08	-0.032	2227	3056	2044	2642	0.015588	0.015486	C15	2	1690	1.01	0.003	leuS	b0642	leucine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
659	304	1.32	0.120	3322	2026	482	2674	0.015777	0.003650	G6	3	596	4.32	0.636	ybeL	b0643	putative alpha helical protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
553	662	-1.20	-0.079	302	215	607	259	0.001527	0.004603	B22	2	2865	-1.53	-0.186	ybeQ	b0644	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1017	969	1.05	0.021	522	562	993	542	0.003198	0.007521	D22	2	2866	-2.35	-0.371	ybeR	b0645	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1133	1359	-1.20	-0.079	1205	1317	1246	1261	0.007441	0.009440	D1	2	2402	-1.27	-0.103	ybeS	b0646	putative enzyme of polynucleotide modification	Putative enzymes	putative enzyme; Not classified
1458	1676	-1.15	-0.061	2585	2728	1567	2657	0.015677	0.011872	F22	2	2867	1.32	0.121	ybeT	b0647	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
910	1604	-1.76	-0.246	338	1962	1257	1150	0.006787	0.009523	E15	2	1691	-1.40	-0.147	ybeU	b0648	putative tRNA ligase	Putative enzymes	putative enzyme; Not classified
3820	3986	-1.04	-0.018	3972	3381	3903	3677	0.021695	0.029578	H22	2	2868	-1.36	-0.135	ybeV	b0649	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1092	1115	-1.02	-0.009	715	641	1103	678	0.004002	0.008361	D20	4	1514	-2.09	-0.320	ybeW	b0650	putative dnaK protein	Putative enzymes	putative enzyme; Not classified
149	341	-1.00	0.000	499	624	245	562	0.003315	0.001858	G15	2	1692	1.10	0.043	ybeK	b0651	putative tRNA synthetase	"Hypothetical, unclassified, unknown"	orf; Not classified
679	529	1.28	0.109	923	706	604	814	0.004805	0.004575	N2	2	665	1.05	0.021	gltL	b0652	ATP-binding protein of glutamate/aspartate transport system	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
148	45	1.00	0.000	180	124	97	152	0.000897	0.000732	C24	3	666	1.00	0.000	gltK	b0653	glutamate/aspartate transport system permease	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
12662	15739	-1.24	-0.094	29452	29751	14200	29602	0.174670	0.107606	E24	3	667	1.62	0.210	gltJ	b0654	glutamate/aspartate transport system permease	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
5428	5722	-1.05	-0.023	5993	6593	5575	6293	0.037133	0.042247	N17	2	935	-1.14	-0.056	ybeJ	b0655	putative periplasmic binding transport protein	Putative transport proteins	putative transport; Not classified
8910	9187	-1.03	-0.013	4608	4397	9049	4502	0.026567	0.068567	G11	4	332	-2.58	-0.412	trs5_3	b0656	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
418	136	1.00	0.000	744	451	277	597	0.003525	0.002100	G24	3	668	1.17	0.070	lnt	b0657	"apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane"	Transport and binding proteins	enzyme; Transport of small molecules: Cations
1215	1220	-1.00	-0.002	598	1687	1218	1143	0.006742	0.009226	F1	2	2403	-1.37	-0.136	ybeX	b0658	putative transport protein	Putative transport proteins	putative transport; Not classified
310	455	-1.00	0.000	828	701	382	764	0.004510	0.002898	J22	2	2869	1.50	0.177	ybeY	b0659	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
18146	18279	-1.01	-0.003	30032	32548	18213	31290	0.184633	0.138010	P17	2	936	1.34	0.126	ybeZ	b0660	putative ATP-binding protein in pho regulon	Putative transport proteins	putative transport; Not classified
1238	1353	-1.09	-0.038	2006	2561	1295	2283	0.013473	0.009817	L22	2	2870	1.37	0.138	yleA	b0661	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
431	503	-1.01	-0.002	371	343	467	357	0.002106	0.003536	N22	2	2871	-1.18	-0.071	yleB	b0662	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3582	3276	1.09	0.039	2487	2155	3429	2321	0.013694	0.025983	P22	2	2872	-1.90	-0.278	b0663	b0663	putative RNA	"Hypothetical, unclassified, unknown"	putative RNA; Not classified
1502	1440	1.04	0.018	1458	1362	1471	1410	0.008321	0.011146	B24	2	2873	-1.34	-0.127	b0667	b0667	putative RNA	"Hypothetical, unclassified, unknown"	putative RNA; Not classified
2743	2521	1.09	0.037	1722	2401	2632	2062	0.012166	0.019947	D24	2	2874	-1.64	-0.215	b0669	b0669	putative RNA	"Hypothetical, unclassified, unknown"	putative RNA; Not classified
778	1047	-1.35	-0.129	1113	1224	912	1169	0.006895	0.006911	F24	2	2875	-1.00	-0.001	b0671	b0671	putative RNA	"Hypothetical, unclassified, unknown"	putative RNA; Not classified
1777	1775	1.00	0.001	1521	1690	1776	1606	0.009475	0.013456	A13	4	1873	-1.42	-0.152	asnB	b0674	asparagine synthetase B	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Asparagine
1160	493	2.32	0.365	700	767	826	734	0.004329	0.006263	I4	3	2125	-1.45	-0.160	nagD	b0675	N-acetylglucosamine metabolism	Carbon compound catabolism	enzyme; Central intermediary metabolism: Amino sugars
1341	889	1.51	0.179	1747	1327	1115	1537	0.009070	0.008447	K4	3	2126	1.07	0.031	nagC	b0676	transcriptional repressor of nag (N-acetylglucosamine) operon	Regulatory function	regulator; Central intermediary metabolism: Amino sugars
1124	945	1.19	0.075	1728	1446	1035	1587	0.009365	0.007840	M4	3	2127	1.19	0.077	nagA	b0677	N-acetylglucosamine-6-phosphate deacetylase	Carbon compound catabolism	enzyme; Central intermediary metabolism: Amino sugars
707	68	1.41	0.150	706	351	387	528	0.003116	0.002936	O4	3	2128	1.04	0.016	nagB	b0678	glucosamine-6-phosphate deaminase	Carbon compound catabolism	enzyme; Central intermediary metabolism: Amino sugars
9689	8459	1.15	0.059	7158	5650	9074	6404	0.037787	0.068760	I24	3	669	-1.82	-0.260	nagE	b0679	"PTS system, N-acetylglucosamine-specific enzyme IIABC"	Transport and binding proteins	"enzyme; Transport of small molecules: Amino acids, amines"
47007	47065	-1.00	-0.001	63375	73559	47036	68467	0.404002	0.356429	I15	2	1693	1.13	0.054	glnS	b0680	glutamine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
667	877	-1.32	-0.119	569	1230	772	900	0.005308	0.005848	H24	2	2876	-1.10	-0.042	ybfM	b0681	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
71	495	-1.00	0.000	0	562	283	281	0.001658	0.002143	J24	2	2877	-1.00	0.000	ybfN	b0682	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1350	1685	-1.25	-0.096	3326	3168	1517	3247	0.019162	0.011499	K9	2	134	1.67	0.222	fur	b0683	negative regulator	Regulatory function	regulator; Global regulatory functions
956	993	-1.04	-0.016	1021	1513	975	1267	0.007475	0.007386	P8	2	1280	1.01	0.005	fldA	b0684	flavodoxin 1	Energy metabolism	"enzyme; Energy metabolism, carbon: Electron transport"
385	240	1.00	0.000	408	397	312	402	0.002373	0.002367	L24	2	2878	1.00	0.000	ybfE	b0685	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
306	517	-1.03	-0.014	420	606	411	513	0.003027	0.003118	N24	2	2879	-1.03	-0.013	ybfF	b0686	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1306	1341	-1.03	-0.012	1710	1748	1323	1729	0.010201	0.010028	F20	4	1515	1.02	0.007	seqA	b0687	negative modulator of initiation of replication	Regulatory function	"regulator; DNA - replication, repair, restriction/modification"
1607	1496	1.07	0.031	3123	2634	1552	2879	0.016987	0.011758	E5	1	19	1.44	0.160	pgm	b0688	phosphoglucomutase	Central intermediary metabolism	enzyme; Degradation of small molecules: Glycolysis
1571	1457	1.08	0.033	1829	1312	1514	1570	0.009267	0.011473	A6	3	2129	-1.24	-0.093	ybfP	b0689	putative pectinase	Putative enzymes	putative enzyme; Not classified
195	164	1.00	0.000	235	104	180	170	0.001000	0.001361	L8	2	2880	-1.00	0.000	ybfG	b0690	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
149	103	1.00	0.000	181	383	126	282	0.001662	0.000955	B2	3	2881	1.00	0.000	ybfH	b0691	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
155	36	1.00	0.000	221	91	95	156	0.000919	0.000723	K24	3	670	1.00	0.000	potE	b0692	putrescine transport protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
676	546	1.24	0.093	1080	957	611	1018	0.006009	0.004632	C6	3	2130	1.30	0.113	speF	b0693	"ornithine decarboxylase isozyme, inducible"	Central intermediary metabolism	enzyme; Central intermediary metabolism: Polyamine biosynthesis
42	196	-1.00	0.000	-33	93	119	30	0.000178	0.000901	M9	2	135	-1.00	0.000	kdpE	b0694	regulator of kdp operon (transcriptional effector)	Regulatory function	regulator; Global regulatory functions
775	1270	-1.64	-0.214	1488	1663	1023	1576	0.009298	0.007748	O9	2	136	1.20	0.079	kdpD	b0695	sensor for high-affinity potassium transport system	Regulatory function	enzyme; Global regulatory functions
424	390	1.00	0.000	559	546	407	553	0.003261	0.003085	M24	3	671	1.06	0.024	kdpC	b0696	high-affinity potassium transport system	Transport and binding proteins	enzyme; Transport of small molecules: Cations
231	98	1.00	0.000	246	83	164	165	0.000972	0.001245	O24	3	672	-1.00	0.000	kdpB	b0697	"ATPase of high-affinity potassium transport system, B chain"	Transport and binding proteins	enzyme; Transport of small molecules: Cations
12196	10115	1.21	0.081	16711	15560	11155	16136	0.095211	0.084533	A2	4	673	1.13	0.052	kdpA	b0698	"ATPase of high-affinity potassium transport system, A chain"	Transport and binding proteins	enzyme; Transport of small molecules: Cations
725	340	1.45	0.161	1462	551	533	1006	0.005938	0.004036	D2	3	2882	1.47	0.168	ybfA	b0699	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-40	-65	1.00	0.000	-121	-128	-52	-124	-0.000734	-0.000398	F2	3	2883	-1.00	0.000	rhsC	b0700	"rhsC protein in rhs element, interrupted"	"Hypothetical, unclassified, unknown"	orf; Transposon-related functions
537	544	-1.01	-0.005	324	266	541	295	0.001740	0.004097	N16	1	4287	-1.37	-0.135	b0701	b0701	rhsC protein in rhs element	"Hypothetical, unclassified, unknown"	orf; Transposon-related functions
-1	-600	1.00	0.000	77	-331	-300	-127	-0.000750	-0.002276	H2	3	2884	1.00	0.000	ybfB	b0702	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2192	2095	1.05	0.020	736	342	2144	539	0.003180	0.016246	J2	3	2885	-5.11	-0.708	b0703	b0703	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-42	-73	1.00	0.000	133	137	-57	135	0.000796	-0.000434	L2	3	2886	1.00	0.000	ybfC	b0704	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
70	10	1.00	0.000	93	37	40	65	0.000382	0.000302	M1	3	199	1.00	0.000	ybfL	b0705	putative receptor protein	Putative factors	putative factor; Not classified
4811	4825	-1.00	-0.001	7294	7679	4818	7487	0.044177	0.036509	H20	4	1516	1.21	0.083	ybfD	b0706	putative DNA ligase	Putative enzymes	putative enzyme; Not classified
586	556	1.05	0.023	522	261	571	391	0.002308	0.004328	N2	3	2887	-1.44	-0.159	ybgA	b0707	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
43046	31112	1.38	0.141	60604	59595	37079	60100	0.354630	0.280977	J20	4	1517	1.26	0.101	phrB	b0708	deoxyribodipyrimidine photolyase (photoreactivation)	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
419	432	-1.00	0.000	1123	1198	425	1160	0.006846	0.003222	C2	4	674	2.13	0.327	ybgH	b0709	putative transport protein	Putative transport proteins	putative transport; Not classified
513	547	-1.07	-0.028	1678	1289	530	1484	0.008756	0.004015	P2	3	2888	2.18	0.339	ybgI	b0710	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
10628	10847	-1.02	-0.009	18432	18016	10738	18224	0.107533	0.081368	E6	3	2131	1.32	0.121	ybgJ	b0711	putative carboxylase	Putative enzymes	putative enzyme; Not classified
2680	2473	1.08	0.035	3900	2518	2576	3209	0.018936	0.019522	G6	3	2132	-1.03	-0.013	ybgK	b0712	putative carboxylase	Putative enzymes	putative enzyme; Not classified
1060	960	1.10	0.043	3313	2701	1010	3007	0.017744	0.007650	G5	1	20	2.32	0.365	ybgL	b0713	putative lactam utilization protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
1646	1452	1.13	0.055	1841	1922	1549	1882	0.011103	0.011737	L20	4	1518	-1.06	-0.024	nei	b0714	endonuclease VIII and DNA N-glycosylase with an AP lyase activity	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1858	1833	1.01	0.006	3781	4046	1846	3914	0.023094	0.013986	B19	2	937	1.65	0.218	abrB	b0715	putative transport protein	Putative transport proteins	putative transport; Not classified
305	167	1.00	0.000	293	-111	236	91	0.000535	0.001788	B4	3	2889	-1.00	0.000	ybgO	b0716	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1094	1211	-1.11	-0.044	2757	2563	1153	2660	0.015698	0.008734	J4	2	1248	1.80	0.255	ybgP	b0717	putative chaperone	Putative factors	putative factor; Not classified
2051	2084	-1.02	-0.007	2055	2790	2067	2423	0.014295	0.015666	I6	3	2133	-1.10	-0.040	ybgQ	b0718	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
54	106	-1.00	0.000	56	228	80	142	0.000839	0.000606	H13	4	1108	1.00	0.000	ybgD	b0719	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
13495	13242	1.02	0.008	11247	10431	13369	10839	0.063959	0.101306	B10	2	1281	-1.58	-0.200	gltA	b0720	citrate synthase	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
3220	3796	-1.18	-0.071	3708	3858	3508	3783	0.022321	0.026585	D10	2	1282	-1.19	-0.076	sdhC	b0721	"succinate dehydrogenase, cytochrome b556"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
1946	1954	-1.00	-0.002	1528	1509	1950	1519	0.008961	0.014780	F10	2	1283	-1.65	-0.217	sdhD	b0722	"succinate dehydrogenase, hydrophobic subunit"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
2892	2317	1.25	0.096	1438	1583	2605	1511	0.008913	0.019737	H10	2	1284	-2.21	-0.345	sdhA	b0723	"succinate dehydrogenase, flavoprotein subunit"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
1221	1197	1.02	0.009	490	991	1209	740	0.004368	0.009159	J10	2	1285	-2.10	-0.322	sdhB	b0724	"succinate dehydrogenase, iron sulfur protein"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
2102	1075	1.95	0.291	1378	1011	1589	1195	0.007049	0.012039	D4	3	2890	-1.71	-0.232	b0725	b0725	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
9804	9362	1.05	0.020	2270	2709	9583	2489	0.014689	0.072621	L10	2	1286	-4.94	-0.694	sucA	b0726	2-oxoglutarate dehydrogenase (decarboxylase component)	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
3703	4597	-1.24	-0.094	1659	1337	4150	1498	0.008840	0.031450	N10	2	1287	-3.56	-0.551	sucB	b0727	2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component)	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
26797	26230	1.02	0.009	26587	37611	26514	32099	0.189405	0.200913	P10	2	1288	-1.06	-0.026	sucC	b0728	"succinyl-CoA synthetase, beta subunit"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
2772	2817	-1.02	-0.007	1258	1939	2794	1598	0.009432	0.021175	B12	2	1289	-2.25	-0.351	sucD	b0729	"succinyl-CoA synthetase, alpha subunit"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
120	529	-1.06	-0.025	330	1060	325	695	0.004099	0.002462	D12	2	1290	1.37	0.136	farR	b0730	transcriptional regulator of succinylCoA synthetase operon	Regulatory function	"regulator; Energy metabolism, carbon: TCA cycle"
1112	1253	-1.13	-0.052	703	1906	1183	1305	0.007698	0.008962	K15	2	1694	-1.16	-0.066	hrsA	b0731	"protein modification enzyme, induction of ompC"	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
1080	1394	-1.29	-0.111	1914	1899	1237	1906	0.011248	0.009376	I5	1	21	1.20	0.079	ybgG	b0732	putative sugar hydrolase	Putative enzymes	putative enzyme; Not classified
1419	1528	-1.08	-0.032	2126	2067	1473	2096	0.012369	0.011165	F12	2	1291	1.11	0.044	cydA	b0733	"cytochrome d terminal oxidase, polypeptide subunit I"	Energy metabolism	"enzyme; Energy metabolism, carbon: Electron transport"
384	640	-1.28	-0.107	793	1112	512	952	0.005620	0.003881	H12	2	1292	1.45	0.161	cydB	b0734	cytochrome d terminal oxidase polypeptide subunit II	Energy metabolism	"enzyme; Energy metabolism, carbon: Electron transport"
975	672	1.45	0.162	455	64	823	259	0.001531	0.006239	F4	3	2891	-2.08	-0.318	ybgE	b0735	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
345	199	1.00	0.000	582	281	272	432	0.002548	0.002061	H4	3	2892	1.00	0.000	ybgC	b0736	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7230	7569	-1.05	-0.020	5988	5943	7400	5966	0.035202	0.056072	I11	4	333	-1.59	-0.202	tolQ	b0737	"inner membrane protein, membrane-spanning, maintains integrity of cell envelope; tolerance to group A colicins"	Cell processes	membrane; Colicin-related functions
301	270	1.00	0.000	396	402	285	399	0.002354	0.002162	K11	4	334	1.00	0.000	tolR	b0738	"putative inner membrane protein, involved in the tonB-independent uptake of group A colicins"	"Phage, transposon, or plasmid"	putative transport; Not classified
1010	839	1.20	0.081	1179	976	925	1077	0.006357	0.007006	M11	4	335	-1.10	-0.042	tolA	b0739	"membrane spanning protein, required for outer membrane integrity"	Cell processes	membrane; Colicin-related functions
3810	2835	1.34	0.128	4634	3420	3322	4027	0.023764	0.025176	O11	4	336	-1.06	-0.025	tolB	b0740	periplasmic protein involved in the tonb-independent uptake of group A colicins	Cell processes	factor; Colicin-related functions
3569	3079	1.16	0.064	5917	6039	3324	5978	0.035276	0.025190	E14	1	435	1.40	0.146	pal	b0741	peptidoglycan-associated lipoprotein	Cell structure	"membrane; Macromolecule synthesis, modification: Lipoprotein"
2077	1728	1.20	0.080	2729	2433	1903	2581	0.015228	0.014417	J4	3	2893	1.06	0.024	ybgF	b0742	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
10390	8856	1.17	0.069	7442	7454	9623	7448	0.043948	0.072920	I24	4	2301	-1.66	-0.220	nadA	b0750	"quinolinate synthetase, A protein"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide"
1469	1281	1.15	0.059	1247	1736	1375	1491	0.008799	0.010421	E2	4	675	-1.18	-0.073	pnuC	b0751	required for NMN transport	Transport and binding proteins	"transport; Transport of small molecules: Nucleosides, purines, pyrimidines"
393	362	1.00	0.000	213	638	377	426	0.002512	0.002860	D19	2	938	-1.00	0.000	ybgR	b0752	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
864	677	1.28	0.106	2306	2200	770	2253	0.013295	0.005837	L4	3	2894	2.28	0.358	b0753	b0753	putative homeobox protein	Putative regulatory proteins	putative regulator; Not classified
6981	5926	1.18	0.071	6388	4905	6453	5646	0.033317	0.048902	C13	4	1874	-1.47	-0.167	aroG	b0754	"3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible)"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Phenylalanine
7058	6715	1.05	0.022	31190	29196	6887	30193	0.178161	0.052186	J12	2	1293	3.41	0.533	gpmA	b0755	phosphoglyceromutase 1	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
1152	1227	-1.06	-0.027	1636	1639	1189	1638	0.009664	0.009013	K6	3	2134	1.07	0.030	galM	b0756	galactose-1-epimerase (mutarotase)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
1089	1802	-1.65	-0.219	6407	5535	1445	5971	0.035235	0.010952	K5	1	22	3.22	0.507	galK	b0757	galactokinase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
411	427	-1.00	0.000	568	459	419	513	0.003028	0.003177	M5	1	23	-1.05	-0.021	galT	b0758	galactose-1-phosphate uridylyltransferase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
31609	31901	-1.01	-0.004	30917	28106	31755	29512	0.174139	0.240629	O5	1	24	-1.38	-0.140	galE	b0759	UDP-galactose-4-epimerase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
632	764	-1.21	-0.082	656	1039	698	848	0.005002	0.005289	N20	4	1519	-1.06	-0.024	modF	b0760	ATP-binding component of molybdate transport system	Transport and binding proteins	transport; Transport of small molecules: Anions
566	507	1.12	0.048	732	927	536	830	0.004896	0.004065	G2	4	676	1.20	0.081	modE	b0761	molybdate uptake regulatory protein	Regulatory function	regulator; Transport of small molecules: Anions
525	352	1.05	0.021	1318	967	439	1142	0.006741	0.003323	N4	3	2895	2.03	0.307	b0762	b0762	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
429	349	1.00	0.000	3342	4274	389	3808	0.022468	0.002945	I2	4	677	7.49	0.874	modA	b0763	molybdate-binding periplasmic protein; permease	Transport and binding proteins	transport; Transport of small molecules: Anions
8550	8523	1.00	0.001	16796	16719	8537	16758	0.098884	0.064689	K2	4	678	1.53	0.184	modB	b0764	molybdate transport permease protein	Transport and binding proteins	transport; Transport of small molecules: Anions
357	340	1.00	0.000	1005	756	349	880	0.005195	0.002642	M2	4	679	1.73	0.238	modC	b0765	ATP-binding component of molybdate transport	Transport and binding proteins	transport; Transport of small molecules: Anions
823	680	1.21	0.083	695	585	752	640	0.003778	0.005696	M6	3	2135	-1.51	-0.178	ybhA	b0766	putative phosphatase	Putative enzymes	putative enzyme; Not classified
1437	1323	1.09	0.036	2044	2035	1380	2040	0.012035	0.010457	O6	3	2136	1.15	0.061	ybhE	b0767	putative isomerase	"Hypothetical, unclassified, unknown"	orf; Not classified
136	13	1.00	0.000	152	104	74	128	0.000755	0.000564	O1	3	200	1.00	0.000	ybhD	b0768	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
80	-25	1.00	0.000	96	22	28	59	0.000349	0.000211	P4	3	2896	1.00	0.000	ybhH	b0769	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-80	39	-1.00	0.000	340	340	-21	340	0.002006	-0.000157	F19	2	939	1.00	0.000	ybhI	b0770	putative membrane pump protein	"Hypothetical, unclassified, unknown"	orf; Not classified
263	-61	1.00	0.000	209	13	101	111	0.000654	0.000764	B6	3	2897	-1.00	0.000	ybhJ	b0771	putative enzyme	Putative enzymes	putative enzyme; Not classified
2297	1946	1.18	0.072	1638	1530	2122	1584	0.009346	0.016079	A8	3	2137	-1.72	-0.236	ybhC	b0772	putative pectinesterase	"Hypothetical, unclassified, unknown"	orf; Not classified
321	166	1.00	0.000	649	646	244	648	0.003821	0.001846	D6	3	2898	1.27	0.105	ybhB	b0773	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7527	6882	1.09	0.039	7751	8607	7204	8179	0.048262	0.054593	K24	4	2302	-1.13	-0.054	bioA	b0774	"7,8-diaminopelargonic acid synthetase"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Biotin"
3943	4022	-1.02	-0.009	4381	5047	3982	4714	0.027815	0.030175	M24	4	2303	-1.08	-0.035	bioB	b0775	"biotin synthesis, sulfur insertion?"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Biotin"
2941	3267	-1.11	-0.046	9924	9425	3104	9674	0.057086	0.023519	O24	4	2304	2.43	0.385	bioF	b0776	8-amino-7-oxononanoate synthase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Biotin"
503	370	1.01	0.003	1095	1229	436	1162	0.006856	0.003307	B1	1	2305	2.07	0.317	bioC	b0777	biotin biosynthesis; reaction prior to pimeloyl CoA	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Biotin"
2099	2570	-1.22	-0.088	2956	2889	2335	2923	0.017245	0.017692	D1	1	2306	-1.03	-0.011	bioD	b0778	dethiobiotin synthetase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Biotin"
1077	1102	-1.02	-0.010	1064	1502	1089	1283	0.007569	0.008255	K21	1	1622	-1.09	-0.038	uvrB	b0779	DNA repair; excision nuclease subunit B	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
197	210	-1.00	0.000	444	657	203	550	0.003246	0.001541	I6	3	597	1.08	0.034	ybhK	b0780	putative structural protein	Putative cell structure	putative structure; Not classified
1761	1851	-1.05	-0.022	2134	1611	1806	1872	0.011048	0.013684	F1	1	2307	-1.24	-0.093	moaA	b0781	"molybdopterin biosynthesis, protein A"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Molybdopterin"
1529	1333	1.15	0.060	2128	1937	1431	2032	0.011992	0.010843	H1	1	2308	1.11	0.044	moaB	b0782	"molybdopterin biosynthesis, protein B"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Molybdopterin"
2888	2903	-1.01	-0.002	5462	6148	2895	5805	0.034253	0.021941	J1	1	2309	1.56	0.193	moaC	b0783	"molybdopterin biosynthesis, protein C"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Molybdopterin"
2388	2354	1.01	0.006	4796	4727	2371	4762	0.028098	0.017965	L1	1	2310	1.56	0.194	moaD	b0784	molybdopterin biosynthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Molybdopterin"
9362	9161	1.02	0.009	25196	24234	9261	24715	0.145835	0.070181	N1	1	2311	2.08	0.318	moaE	b0785	"molybdopterin converting factor, subunit 2"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Molybdopterin"
649	691	-1.06	-0.027	1073	1116	670	1095	0.006459	0.005074	G2	3	580	1.27	0.105	ybhL	b0786	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
351	109	1.00	0.000	685	519	230	602	0.003552	0.001741	F6	3	2899	1.18	0.073	ybhM	b0787	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
12164	11486	1.06	0.025	15521	15220	11825	15370	0.090695	0.089605	H6	3	2900	1.01	0.005	ybhN	b0788	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2859	2895	-1.01	-0.006	5122	5659	2877	5391	0.031809	0.021801	C8	3	2138	1.46	0.164	ybhO	b0789	putative synthetase	"Hypothetical, unclassified, unknown"	orf; Not classified
811	-9	1.62	0.210	1350	769	401	1059	0.006250	0.003040	J6	3	2901	2.06	0.313	ybhP	b0790	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
263	-39	1.00	0.000	360	255	112	307	0.001813	0.000849	L6	3	2902	1.00	0.000	ybhQ	b0791	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
264	125	1.00	0.000	326	108	194	217	0.001280	0.001472	N6	3	2903	-1.00	0.000	ybhR	b0792	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
160	257	-1.00	0.000	129	283	209	206	0.001216	0.001580	P6	3	2904	-1.00	0.000	ybhS	b0793	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1579	1899	-1.20	-0.080	2169	2267	1739	2218	0.013088	0.013176	H19	2	940	-1.01	-0.003	ybhF	b0794	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
22229	10917	2.04	0.309	28023	26133	16573	27078	0.159780	0.125587	G14	1	436	1.27	0.105	b0795	b0795	putative membrane protein	putative membrane protein	putative membrane; Not classified
917	727	1.26	0.101	656	579	822	617	0.003644	0.006227	B8	3	2905	-1.71	-0.233	ybiH	b0796	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
634	556	1.14	0.057	830	544	595	687	0.004055	0.004508	M21	1	1623	-1.11	-0.046	rhlE	b0797	putative ATP-dependent RNA helicase	Putative enzymes	putative enzyme; Not classified
-34	-19	-1.00	0.000	275	-27	-26	124	0.000731	-0.000199	D8	3	2906	1.00	0.000	ybiA	b0798	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2050	2309	-1.13	-0.052	1326	1275	2179	1301	0.007674	0.016514	P20	4	1520	-2.15	-0.333	dinG	b0799	probably ATP-dependent helicase	"DNA replication, repair, restriction/modification"	"putative enzyme; DNA - replication, repair, restriction/modification"
3291	3223	1.02	0.009	2879	3922	3257	3400	0.020064	0.024678	H1	2	2404	-1.23	-0.090	ybiB	b0800	putative enzyme	Putative enzymes	putative enzyme; Not classified
3287	4485	-1.36	-0.135	2127	4553	3886	3340	0.019709	0.029447	J1	2	2405	-1.49	-0.174	ybiC	b0801	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
356	371	-1.00	0.000	389	697	364	543	0.003204	0.002755	F8	3	2907	1.07	0.029	ybiJ	b0802	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3382	2995	1.13	0.053	2640	2622	3188	2631	0.015524	0.024162	H8	3	2908	-1.56	-0.192	ybiI	b0803	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
272	302	-1.00	0.000	161	407	287	284	0.001675	0.002175	L1	2	2406	-1.00	0.000	ybiX	b0804	putative enzyme	Putative enzymes	putative enzyme; Not classified
425	274	1.00	0.000	648	596	350	622	0.003672	0.002649	A3	3	201	1.22	0.088	b0805	b0805	putative outer membrane receptor for iron transport	putative membrane protein	putative membrane; Not classified
414	204	1.00	0.000	418	399	309	408	0.002410	0.002345	J8	3	2909	1.00	0.000	ybiM	b0806	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
366	263	1.00	0.000	309	203	314	256	0.001510	0.002383	L8	3	2910	-1.00	0.000	ybiN	b0807	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3728	3312	1.13	0.051	3669	3411	3520	3540	0.020889	0.026673	N8	3	2911	-1.28	-0.106	ybiO	b0808	putative transport protein	Putative transport proteins	putative transport; Not classified
570	563	1.01	0.005	937	1015	567	976	0.005762	0.004293	O2	4	680	1.34	0.128	glnQ	b0809	ATP-binding component of glutamine high-affinity transport system	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1466	1411	1.04	0.017	2172	2148	1439	2160	0.012746	0.010901	A4	4	681	1.17	0.068	glnP	b0810	glutamine high-affinity transport system; membrane component	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
2338	2572	-1.10	-0.042	3346	3695	2455	3521	0.020774	0.018605	C4	4	682	1.12	0.048	glnH	b0811	periplasmic glutamine-binding protein; permease	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
6653	5773	1.15	0.062	13338	12294	6213	12816	0.075622	0.047082	J13	4	1109	1.61	0.206	dps	b0812	"global regulator, starvation conditions"	Regulatory function	regulator; Global regulatory functions
140	89	1.00	0.000	172	189	114	181	0.001066	0.000867	P8	3	2912	1.00	0.000	ybiF	b0813	putative transmembrane subunit	putative membrane protein	putative membrane; Not classified
1788	2124	-1.19	-0.075	6722	6661	1956	6692	0.039485	0.014821	I14	1	437	2.66	0.426	ompX	b0814	outer membrane protein X	Cell structure	membrane; Outer membrane constituents
12837	12049	1.07	0.028	11781	12621	12443	12201	0.071995	0.094290	N1	2	2407	-1.31	-0.117	ybiP	b0815	putative enzyme	Putative enzymes	putative enzyme; Not classified
737	534	1.38	0.140	1164	934	635	1049	0.006191	0.004815	B10	3	2913	1.29	0.109	b0816	b0816	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1017	863	1.18	0.071	2268	1891	940	2080	0.012271	0.007122	D10	3	2914	1.72	0.236	b0817	b0817	putative toxin	Putative transport proteins	putative transport; Not classified
750	5	1.50	0.176	941	609	377	775	0.004573	0.002858	F10	3	2915	1.52	0.183	ybiR	b0818	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1524	1252	1.22	0.085	2454	1790	1388	2122	0.012521	0.010521	H10	3	2916	1.19	0.076	ybiS	b0819	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2776	2234	1.24	0.094	2846	2279	2505	2563	0.015121	0.018981	J19	2	941	-1.26	-0.099	ybiT	b0820	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
1048	693	1.51	0.179	1737	1679	871	1708	0.010080	0.006599	J10	3	2917	1.53	0.184	ybiU	b0821	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
385	306	1.00	0.000	257	217	346	237	0.001398	0.002618	L10	3	2918	-1.00	0.000	b0822	b0822	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1857	2041	-1.10	-0.041	1870	1747	1949	1809	0.010672	0.014769	D8	2	2408	-1.38	-0.141	ybiW	b0823	putative formate acetyltransferase	Putative enzymes	putative enzyme; Not classified
22	466	-1.00	0.000	-350	691	244	170	0.001005	0.001849	B3	2	2409	-1.00	0.000	ybiY	b0824	putative pyruvate formate-lyase 2 activating enzyme	Putative enzymes	putative enzyme; Not classified
3344	2166	1.54	0.189	3219	2599	2755	2909	0.017164	0.020874	E8	3	2139	-1.22	-0.085	mipB	b0825	putative transaldolase	Putative enzymes	putative enzyme; Not classified
3615	3152	1.15	0.060	6054	5911	3384	5983	0.035301	0.025640	B8	2	2312	1.38	0.139	moeB	b0826	molybdopterin biosynthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Molybdopterin"
8264	6615	1.25	0.097	7177	6254	7439	6716	0.039626	0.056373	B3	1	2313	-1.42	-0.153	moeA	b0827	molybdopterin biosynthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Molybdopterin"
3633	5308	-1.46	-0.165	5987	7391	4470	6689	0.039468	0.033876	E13	4	1875	1.17	0.066	ybiK	b0828	putative asparaginase	"Hypothetical, unclassified, unknown"	orf; Not classified
2120	2306	-1.09	-0.036	3983	3899	2213	3941	0.023256	0.016768	E4	4	683	1.39	0.142	b0829	b0829	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
202	143	1.00	0.000	602	527	172	564	0.003330	0.001306	G4	4	684	1.11	0.045	b0830	b0830	putative transport protein	Putative transport proteins	putative transport; Not classified
1304	1415	-1.08	-0.035	3499	3314	1360	3406	0.020099	0.010305	I4	4	685	1.95	0.290	b0831	b0831	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1499	1782	-1.19	-0.075	2552	2521	1640	2536	0.014967	0.012431	K4	4	686	1.20	0.081	b0832	b0832	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
509	295	1.02	0.008	414	219	402	316	0.001867	0.003049	N10	3	2919	-1.02	-0.007	b0833	b0833	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
958	856	1.12	0.049	1202	1238	907	1220	0.007199	0.006871	P10	3	2920	1.05	0.020	b0834	b0834	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1229	1079	1.14	0.057	1295	805	1154	1050	0.006196	0.008742	B12	3	2921	-1.41	-0.149	yliG	b0835	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
823	602	1.37	0.136	2520	2356	712	2438	0.014387	0.005397	C3	3	202	2.67	0.426	b0836	b0836	putative receptor	Putative factors	putative factor; Not classified
745	735	1.01	0.006	895	725	740	810	0.004779	0.005607	D3	2	2410	-1.17	-0.069	yliI	b0837	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
800	881	-1.10	-0.042	811	1284	841	1048	0.006182	0.006371	F3	2	2411	-1.03	-0.013	yliJ	b0838	putative transferase	Putative enzymes	putative enzyme; Not classified
1462	1886	-1.29	-0.111	2074	2230	1674	2152	0.012699	0.012686	K14	1	438	1.00	0.000	dacC	b0839	D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
1111	901	1.23	0.091	1317	1084	1006	1200	0.007082	0.007623	E20	1	1995	-1.08	-0.032	deoR	b0840	"transcriptional repressor for deo operon, tsx, nupG"	Regulatory function	regulator; Salvage of nucleosides and nucleotides
1670	1927	-1.15	-0.062	4051	4499	1799	4275	0.025225	0.013629	D12	3	2922	1.85	0.267	ybjG	b0841	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
899	1022	-1.14	-0.055	1385	1514	961	1449	0.008553	0.007279	L19	2	942	1.17	0.070	cmr	b0842	proton motive force efflux pump	Transport and binding proteins	transport; Transport of small molecules: Other
72	295	-1.00	0.000	554	699	184	626	0.003696	0.001392	F12	3	2923	1.23	0.091	ybjH	b0843	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
513	455	1.03	0.011	906	773	484	839	0.004952	0.003670	H12	3	2924	1.35	0.130	b0844	b0844	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7097	6369	1.11	0.047	9080	9544	6733	9312	0.054947	0.051022	J12	3	2925	1.08	0.032	b0845	b0845	putative DEOR-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1365	1027	1.33	0.124	872	1023	1196	947	0.005590	0.009064	L12	3	2926	-1.62	-0.210	b0846	b0846	putative DEOR-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1037	1252	-1.21	-0.082	1660	1540	1145	1600	0.009442	0.008673	H3	2	2412	1.09	0.037	b0847	b0847	putative transport protein	Putative transport proteins	putative transport; Not classified
1055	357	2.11	0.324	905	393	706	649	0.003829	0.005350	N12	3	2927	-1.40	-0.145	ybjM	b0848	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1651	1282	1.29	0.110	2624	2469	1466	2546	0.015026	0.011112	D3	1	2314	1.35	0.131	grxA	b0849	glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"carrier; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione"
251	114	1.00	0.000	84	242	182	163	0.000959	0.001382	P12	3	2928	-1.00	0.000	ybjC	b0850	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1013	973	1.04	0.018	1622	1242	993	1432	0.008451	0.007524	L13	4	1110	1.12	0.050	mdaA	b0851	modulator of drug activity A	Cell processes	phenotype; Not classified
79	465	-1.00	0.000	134	756	272	445	0.002627	0.002062	M15	2	1695	1.00	0.000	rimK	b0852	ribosomal protein S6 modification protein	"Translation, post-translational modification"	structural component; Ribosomes - maturation and modification
956	1034	-1.08	-0.034	1693	2488	995	2091	0.012337	0.007540	E3	3	203	1.64	0.214	ybjN	b0853	putative sensory transduction regulator	Putative regulatory proteins	putative regulator; Not classified
6599	5756	1.15	0.059	10531	9517	6178	10024	0.059147	0.046812	M4	4	687	1.26	0.102	potF	b0854	periplasmic putrescine-binding protein; permease protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
2200	1339	1.64	0.216	2853	2686	1769	2770	0.016343	0.013408	O4	4	688	1.22	0.086	potG	b0855	ATP-binding component of putrescine transport system	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1859	2029	-1.09	-0.038	2712	2935	1944	2823	0.016661	0.014731	A6	4	689	1.13	0.053	potH	b0856	putrescine transport protein; permease	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1454	1076	1.35	0.131	1939	2871	1265	2405	0.014190	0.009587	C6	4	690	1.48	0.170	potI	b0857	putrescine transport protein; permease	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1315	1747	-1.33	-0.123	2226	1425	1531	1826	0.010773	0.011603	B14	3	2929	-1.08	-0.032	ybjO	b0858	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
648	724	-1.12	-0.048	1694	2183	686	1939	0.011439	0.005199	J3	2	2413	2.20	0.342	ybjF	b0859	putative enzyme	Putative enzymes	putative enzyme; Not classified
2425	2078	1.17	0.067	2664	2736	2252	2700	0.015932	0.017063	E6	4	691	-1.07	-0.030	artJ	b0860	arginine 3rd transport system periplasmic binding protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1712	1820	-1.06	-0.027	6836	6625	1766	6731	0.039715	0.013384	G6	4	692	2.97	0.472	artM	b0861	arginine 3rd transport system permease protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
3281	3071	1.07	0.029	18611	21631	3176	20121	0.118726	0.024068	I6	4	693	4.93	0.693	artQ	b0862	arginine 3rd transport system permease protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
741	873	-1.18	-0.072	1745	1664	807	1704	0.010057	0.006116	K6	4	694	1.64	0.216	artI	b0863	arginine 3rd transport system periplasmic binding protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
870	825	1.06	0.023	593	732	847	662	0.003909	0.006421	M6	4	695	-1.64	-0.216	artP	b0864	ATP-binding component of 3rd arginine transport system	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1820	1619	1.12	0.051	1300	1331	1719	1315	0.007761	0.013028	L3	2	2414	-1.68	-0.225	ybjP	b0865	putative enzyme	Putative enzymes	putative enzyme; Not classified
1285	597	2.15	0.333	2549	1796	941	2172	0.012819	0.007131	D14	3	2930	1.80	0.255	b0866	b0866	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5075	5227	-1.03	-0.013	4042	4880	5151	4461	0.026322	0.039033	N13	4	1111	-1.48	-0.171	b0867	b0867	putative regulator	Putative regulatory proteins	putative regulator; Not classified
966	1015	-1.05	-0.021	929	1274	990	1102	0.006500	0.007505	N3	2	2415	-1.15	-0.062	b0868	b0868	putative nucleotide di-P-sugar epimerase or dehydratase	Putative enzymes	putative enzyme; Not classified
840	589	1.42	0.154	1559	990	715	1274	0.007519	0.005415	M14	1	439	1.39	0.143	ybjT	b0869	putative dTDP-glucose enzyme	Putative enzymes	putative enzyme; Not classified
2869	2823	1.02	0.007	4552	4272	2846	4412	0.026032	0.021565	P3	2	2416	1.21	0.082	ybjU	b0870	putative arylsulfatase	Putative enzymes	putative enzyme; Not classified
4713	4299	1.10	0.040	14186	13835	4506	14011	0.082672	0.034146	A7	1	25	2.42	0.384	poxB	b0871	pyruvate oxidase	Energy metabolism	enzyme; Degradation of small molecules: Carbon compounds
5297	4964	1.07	0.028	6931	6427	5130	6679	0.039408	0.038876	L12	2	1294	1.01	0.006	b0872	b0872	putative enzyme	Putative enzymes	putative enzyme; Not classified
1015	562	1.80	0.256	1191	825	789	1008	0.005945	0.005976	F14	3	2931	-1.01	-0.002	ybjW	b0873	putative prismane	"Hypothetical, unclassified, unknown"	orf; Not classified
374	403	-1.00	0.000	650	612	389	631	0.003724	0.002945	O14	1	440	1.24	0.094	ybjE	b0874	putative surface protein	Putative cell structure	putative structure; Not classified
468	488	-1.00	0.000	438	568	478	503	0.002968	0.003624	O6	4	696	-1.21	-0.082	aqpZ	b0875	transmembrane water channel; aquaporin Z	Transport and binding proteins	transport; Transport of small molecules: Other
582	557	1.04	0.019	976	1022	569	999	0.005893	0.004315	H14	3	2932	1.37	0.135	ybjD	b0876	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
606	867	-1.43	-0.156	177	855	736	516	0.003044	0.005580	B5	2	2417	-1.83	-0.263	ybjX	b0877	putative enzyme	Putative enzymes	putative enzyme; Not classified
3470	2706	1.28	0.108	5796	5752	3088	5774	0.034071	0.023400	K6	3	598	1.46	0.163	b0878	b0878	putative membrane protein	putative membrane protein	putative membrane; Not classified
816	828	-1.01	-0.006	1031	1143	822	1087	0.006413	0.006231	N19	2	943	1.03	0.012	ybjZ	b0879	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
1101	1407	-1.28	-0.107	3439	3531	1254	3485	0.020564	0.009502	P13	4	1112	2.16	0.335	cspD	b0880	cold shock protein	Cell processes	phenotype; Not classified
942	779	1.21	0.082	1204	1438	860	1321	0.007793	0.006520	J14	3	2933	1.20	0.077	yljA	b0881	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
11523	12784	-1.11	-0.045	21916	20826	12154	21371	0.126104	0.092096	O15	2	1696	1.37	0.136	clpA	b0882	ATP-binding component of serine protease	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
855	968	-1.13	-0.054	2653	2431	911	2542	0.014999	0.006906	A17	2	1697	2.17	0.337	infA	b0884	protein chain initiation factor IF-1	"Translation, post-translational modification"	factor; Proteins - translation and modification
336	302	1.00	0.000	-97	464	319	183	0.001082	0.002418	C17	2	1698	-1.00	0.000	aat	b0885	"leucyl, phenylalanyl-tRNA-protein transferase"	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
2680	2410	1.11	0.046	5703	5272	2545	5488	0.032381	0.019286	A8	4	697	1.68	0.225	cydC	b0886	ATP-binding component of cytochrome-related transport	Transport and binding proteins	transport; Transport of small molecules: Other
524	733	-1.40	-0.146	900	1106	629	1003	0.005920	0.004763	C8	4	698	1.24	0.094	cydD	b0887	"ATP-binding component of cytochrome-related transport, Zn sensitive"	Transport and binding proteins	transport; Not classified
1159	1222	-1.05	-0.023	1492	1657	1190	1575	0.009292	0.009020	G20	1	1996	1.03	0.013	trxB	b0888	thioredoxin reductase	Nucleotide biosynthesis and metabolism	enzyme; 2'-Deoxyribonucleotide metabolism
1416	1328	1.07	0.028	2535	1576	1372	2056	0.012130	0.010394	G8	3	2140	1.17	0.067	lrp	b0889	regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system	Regulatory function	"regulator; Central intermediary metabolism: Pool, multipurpose conversions"
72	0	1.00	0.000	190	178	36	184	0.001086	0.000270	B15	4	1113	1.00	0.000	ftsK	b0890	cell division protein	Cell processes	phenotype; Cell division
5207	4999	1.04	0.018	2867	2486	5103	2676	0.015793	0.038669	E8	4	699	-2.45	-0.389	lolA	b0891	periplasmic protein effects translocation of lipoproteins from inner membrane to outer	Transport and binding proteins	"transport; Protein, peptide secretion"
5505	5304	1.04	0.016	7165	6513	5404	6839	0.040352	0.040951	B22	4	1521	-1.01	-0.006	ycaJ	b0892	putative polynucleotide enzyme	Putative enzymes	putative enzyme; Not classified
1978	2460	-1.24	-0.095	2189	2733	2219	2461	0.014523	0.016816	E17	2	1699	-1.16	-0.064	serS	b0893	serine tRNA synthetase; also charges selenocystein tRNA with serine	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
454	685	-1.37	-0.137	310	662	570	486	0.002868	0.004316	N12	2	1295	-1.44	-0.158	dmsA	b0894	anaerobic dimethyl sulfoxide reductase subunit A	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
5497	5299	1.04	0.016	9363	8364	5398	8864	0.052301	0.040904	P12	2	1296	1.28	0.107	dmsB	b0895	anaerobic dimethyl sulfoxide reductase subunit B	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
2618	2867	-1.10	-0.040	4478	4005	2742	4241	0.025027	0.020781	B14	2	1297	1.20	0.081	dmsC	b0896	anaerobic dimethyl sulfoxide reductase subunit C	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
2615	2166	1.21	0.082	5999	5644	2391	5821	0.034350	0.018115	L14	3	2934	1.90	0.278	ycaC	b0897	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
658	982	-1.49	-0.174	616	936	820	776	0.004579	0.006214	P19	2	944	-1.36	-0.133	ycaD	b0898	putative transport	Putative transport proteins	putative transport; Not classified
530	816	-1.54	-0.188	1531	1746	673	1638	0.009667	0.005101	B21	2	945	1.90	0.278	b0899	b0899	putative transport	Putative transport proteins	putative transport; Not classified
431	202	1.00	0.000	650	649	317	649	0.003832	0.002398	G3	3	204	1.28	0.106	ycaN	b0900	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
500	363	1.00	0.000	360	357	431	358	0.002113	0.003269	N14	3	2935	-1.09	-0.037	ycaK	b0901	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
293	331	-1.00	0.000	566	1157	312	861	0.005082	0.002362	D14	2	1298	1.69	0.229	pflA	b0902	pyruvate formate lyase activating enzyme 1	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
5982	4390	1.36	0.134	10919	12110	5186	11515	0.067945	0.039297	F14	2	1299	1.73	0.238	pflB	b0903	formate acetyltransferase 1	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
3453	3429	1.01	0.003	3652	3041	3441	3347	0.019747	0.026072	C7	1	26	-1.32	-0.121	focA	b0904	probable formate transporter (formate channel 1)	Putative transport proteins	putative transport; Degradation of small molecules: Carbon compounds
1016	840	1.21	0.082	738	819	928	779	0.004595	0.007031	P14	3	2936	-1.53	-0.185	ycaO	b0905	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5339	5133	1.04	0.017	4942	4820	5236	4881	0.028800	0.039677	B16	3	2937	-1.38	-0.139	ycaP	b0906	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5831	5925	-1.02	-0.007	8625	8379	5878	8502	0.050167	0.044541	G13	4	1876	1.13	0.052	serC	b0907	3-phosphoserine aminotransferase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Serine
7800	7543	1.03	0.015	7267	7395	7672	7331	0.043260	0.058134	I13	4	1877	-1.34	-0.128	aroA	b0908	5-enolpyruvylshikimate-3-phosphate synthetase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Chorismate
275	-133	1.00	0.000	337	152	71	244	0.001443	0.000537	D16	3	2938	1.00	0.000	ycaL	b0909	putative heat shock protein	Putative factors	putative factor; Not classified
746	873	-1.17	-0.068	845	993	809	919	0.005423	0.006134	I20	1	1997	-1.13	-0.054	cmk	b0910	cytidylate kinase	Nucleotide biosynthesis and metabolism	enzyme; Pyrimidine ribonucleotide biosynthesis
8359	8204	1.02	0.008	10798	12572	8281	11685	0.068949	0.062754	G17	2	1700	1.10	0.041	rpsA	b0911	30S ribosomal subunit protein S1	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
5012	5069	-1.01	-0.005	10379	8597	5041	9488	0.055985	0.038198	D22	4	1522	1.47	0.166	himD	b0912	"integration host factor (IHF), beta subunit; site-specific recombination"	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
4493	3660	1.23	0.089	5258	4204	4077	4731	0.027918	0.030893	F16	3	2939	-1.11	-0.044	ycaI	b0913	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1151	807	1.43	0.154	1694	1563	979	1629	0.009610	0.007420	G8	4	700	1.30	0.112	msbA	b0914	ATP-binding transport protein; multicopy suppressor of htrB	Transport and binding proteins	transport; Transport of small molecules: Other
1021	939	1.09	0.037	631	991	980	811	0.004786	0.007426	D5	2	2418	-1.55	-0.191	ycaH	b0915	putative EC 1.2 enzyme	Putative enzymes	putative enzyme; Not classified
535	553	-1.03	-0.014	871	886	544	879	0.005185	0.004121	H16	3	2940	1.26	0.100	ycaQ	b0916	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1566	1351	1.16	0.064	2263	1782	1459	2023	0.011934	0.011054	J16	3	2941	1.08	0.033	ycaR	b0917	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
498	380	1.00	0.000	951	814	439	882	0.005206	0.003326	A16	1	441	1.57	0.195	kdsB	b0918	CTP:CMP-3-deoxy-D-manno-octulosonate transferase	Cell structure	enzyme; Surface polysaccharides & antigens
773	697	1.11	0.045	834	551	735	692	0.004086	0.005572	L16	3	2942	-1.36	-0.135	b0919	b0919	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2810	2931	-1.04	-0.018	4959	4341	2870	4650	0.027439	0.021752	N16	3	2943	1.26	0.101	ycbC	b0920	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1102	951	1.16	0.064	1201	943	1026	1072	0.006327	0.007778	P16	3	2944	-1.23	-0.090	smtA	b0921	S-adenosylmethionine-dependent methyltransferase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
3359	3375	-1.00	-0.002	3130	4710	3367	3920	0.023130	0.025515	I17	2	1701	-1.10	-0.043	mukF	b0922	mukF protein (killing factor KICB)	Cell processes	factor; Cell killing
5691	5561	1.02	0.010	1961	1720	5626	1840	0.010859	0.042632	B18	3	2945	-3.93	-0.594	mukE	b0923	"orf, hypothetical protein"	Cell processes	factor; Cell killing
201	263	-1.00	0.000	387	375	232	381	0.002247	0.001756	D15	4	1114	1.00	0.000	mukB	b0924	kinesin-like cell division protein involved in chromosome partitioning	Cell processes	structural component; Cell division
475	806	-1.61	-0.207	1007	747	641	877	0.005176	0.004854	F5	2	2419	1.07	0.028	ycbB	b0925	putative amidase	Putative enzymes	putative enzyme; Not classified
2176	1928	1.13	0.053	3053	1970	2052	2512	0.014820	0.015550	D18	3	2946	-1.05	-0.021	ycbK	b0926	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
794	440	1.59	0.201	1275	960	617	1118	0.006595	0.004674	F18	3	2947	1.41	0.149	ycbL	b0927	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4147	4136	1.00	0.001	5851	6481	4142	6166	0.036385	0.031384	K13	4	1878	1.16	0.064	aspC	b0928	aspartate aminotransferase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Aspartate
23410	21094	1.11	0.045	27521	23005	22252	25263	0.149070	0.168617	C16	1	442	-1.13	-0.054	ompF	b0929	outer membrane protein 1a (Ia;b;F)	Cell structure	membrane; Outer membrane constituents
1092	1208	-1.11	-0.044	1584	1481	1150	1533	0.009044	0.008712	K17	2	1702	1.04	0.016	asnS	b0930	asparagine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
3871	3360	1.15	0.061	4168	3534	3615	3851	0.022726	0.027396	F3	1	2315	-1.21	-0.081	pncB	b0931	nicotinate phosphoribosyltransferase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide"
2222	2846	-1.28	-0.108	2371	3688	2534	3029	0.017875	0.019201	M17	2	1703	-1.07	-0.031	pepN	b0932	aminopeptidase N	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
1467	1318	1.11	0.047	1757	1948	1393	1852	0.010930	0.010553	I3	3	205	1.04	0.015	ycbE	b0933	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
241	271	-1.00	0.000	628	700	256	664	0.003919	0.001940	D21	2	946	1.31	0.116	ycbM	b0934	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
772	808	-1.05	-0.020	971	691	790	831	0.004904	0.005983	H18	3	2948	-1.22	-0.086	ycbN	b0935	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
654	616	1.06	0.026	749	426	635	587	0.003466	0.004809	J18	3	2949	-1.39	-0.142	ycbO	b0936	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
626	518	1.21	0.083	642	425	572	533	0.003146	0.004335	L18	3	2950	-1.38	-0.139	ycbP	b0937	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
71	83	-1.00	0.000	259	277	77	268	0.001584	0.000586	E16	1	443	1.00	0.000	ycbQ	b0938	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
2013	1948	1.03	0.014	3168	3373	1980	3271	0.019301	0.015006	B2	2	1249	1.29	0.109	ycbR	b0939	putative chaperone	Putative factors	putative factor; Not classified
1396	1474	-1.06	-0.024	3096	2692	1435	2894	0.017074	0.010875	G16	1	444	1.57	0.196	ycbS	b0940	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
281	351	-1.00	0.000	480	393	316	436	0.002575	0.002395	I16	1	445	1.00	0.000	b0941	b0941	homolog of Salmonella FimH protein	Putative cell structure	putative structure; Not classified
191	171	1.00	0.000	320	209	181	265	0.001561	0.001372	K16	1	446	1.00	0.000	b0942	b0942	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
101	70	1.00	0.000	159	172	86	166	0.000977	0.000648	M16	1	447	1.00	0.000	b0943	b0943	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
965	1219	-1.26	-0.102	6245	7237	1092	6741	0.039776	0.008277	D2	2	1250	4.81	0.682	ycbF	b0944	putative chaperone	Putative factors	putative factor; Not classified
1412	1368	1.03	0.014	747	573	1390	660	0.003895	0.010536	K20	1	1998	-2.70	-0.432	pyrD	b0945	dihydro-orotate dehydrogenase	Nucleotide biosynthesis and metabolism	enzyme; Pyrimidine ribonucleotide biosynthesis
800	726	1.10	0.042	653	589	763	621	0.003664	0.005780	N18	3	2951	-1.58	-0.198	ycbW	b0946	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
480	417	1.00	0.000	536	527	449	532	0.003136	0.003400	P18	3	2952	-1.08	-0.035	b0947	b0947	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2483	2308	1.08	0.032	2247	2286	2396	2267	0.013375	0.018155	B20	3	2953	-1.36	-0.133	ycbY	b0948	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
904	737	1.23	0.089	1336	1611	821	1473	0.008693	0.006219	F21	2	947	1.40	0.145	uup	b0949	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
2795	1982	1.41	0.149	3331	3686	2388	3509	0.020703	0.018098	D11	4	2634	1.14	0.058	pqiA	b0950	paraquat-inducible protein A	Cell processes	phenotype; Not classified
8652	8351	1.04	0.015	7448	7300	8502	7374	0.043510	0.064423	F11	4	2635	-1.48	-0.170	pqiB	b0951	paraquat-inducible protein B	Cell processes	phenotype; Not classified
848	968	-1.14	-0.057	763	684	908	723	0.004268	0.006880	D20	3	2954	-1.61	-0.207	ymbA	b0952	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
143837	130314	1.10	0.043	404715	371473	137076	388094	2.290029	1.038726	O17	2	1704	2.20	0.343	rmf	b0953	ribosome modulation factor	"Translation, post-translational modification"	factor; Ribosomes - maturation and modification
584	547	1.07	0.028	629	912	565	770	0.004546	0.004285	K8	2	2046	1.06	0.026	fabA	b0954	"beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase"	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
1235	1554	-1.26	-0.100	1561	1401	1394	1481	0.008738	0.010567	H5	2	2420	-1.21	-0.083	b0955	b0955	putative ATP-dependent protease	Putative enzymes	putative enzyme; Not classified
441	872	-1.74	-0.242	714	884	656	799	0.004713	0.004973	J5	2	2421	-1.06	-0.023	ycbG	b0956	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
18357	17462	1.05	0.022	20479	17159	17910	18819	0.111046	0.135715	O16	1	448	-1.22	-0.087	ompA	b0957	outer membrane protein 3a (II*;G;d)	Cell structure	membrane; Outer membrane constituents
253	244	1.00	0.000	345	449	249	397	0.002344	0.001886	F15	4	1115	1.00	0.000	sulA	b0958	suppressor of lon; inhibits cell division and ftsZ ring formation	Cell processes	phenotype; Cell division
249	141	1.00	0.000	255	194	195	224	0.001323	0.001478	F20	3	2955	-1.00	0.000	b0959	b0959	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
424	264	1.00	0.000	594	385	344	489	0.002888	0.002608	H20	3	2956	1.00	0.000	b0960	b0960	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
331	158	1.00	0.000	227	120	245	174	0.001025	0.001854	J20	3	2957	-1.00	0.000	yccF	b0961	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5133	7111	-1.39	-0.142	10789	10901	6122	10845	0.063993	0.046394	F22	4	1523	1.38	0.140	helD	b0962	DNA helicase IV	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1182	980	1.21	0.082	1831	1446	1081	1639	0.009668	0.008191	L20	3	2958	1.18	0.072	mgsA	b0963	methylglyoxal synthase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
816	703	1.16	0.065	1414	1318	759	1366	0.008062	0.005754	N20	3	2959	1.40	0.146	b0964	b0964	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3605	3354	1.07	0.031	8625	7987	3479	8306	0.049010	0.026365	P20	3	2960	1.86	0.269	b0965	b0965	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1041	1151	-1.11	-0.043	783	1019	1096	901	0.005317	0.008304	B22	3	2961	-1.56	-0.194	yccV	b0966	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1124	916	1.23	0.089	1298	797	1020	1048	0.006184	0.007728	D22	3	2962	-1.25	-0.097	b0967	b0967	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
460	189	1.00	0.000	900	427	324	664	0.003916	0.002459	F22	3	2963	1.31	0.116	b0968	b0968	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2589	2031	1.27	0.105	3992	3044	2310	3518	0.020759	0.017504	I8	3	2141	1.19	0.074	yccK	b0969	putative sulfite reductase (EC 1.8.-.-)	"Hypothetical, unclassified, unknown"	orf; Not classified
2808	2324	1.21	0.082	1413	1495	2566	1454	0.008578	0.019445	H21	2	948	-2.27	-0.355	yccA	b0970	putative carrier/transport protein	Putative transport proteins	putative transport; Not classified
4580	4110	1.11	0.047	11146	10708	4345	10927	0.064476	0.032925	H14	2	1300	1.96	0.292	hyaA	b0972	hydrogenase-1 small subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
88	89	-1.00	0.000	-46	21	88	-12	-0.000072	0.000671	J14	2	1301	-1.00	0.000	hyaB	b0973	hydrogenase-1 large subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
30	188	-1.00	0.000	-169	123	109	-23	-0.000138	0.000824	L14	2	1302	-1.00	0.000	hyaC	b0974	probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Aerobic respiration"
11000	8423	1.31	0.116	11935	12511	9711	12223	0.072123	0.073591	N14	2	1303	-1.02	-0.009	hyaD	b0975	processing of HyaA and HyaB proteins	Energy metabolism	"factor; Energy metabolism, carbon: Aerobic respiration"
237	439	-1.00	0.000	59	746	338	402	0.002375	0.002562	P14	2	1304	-1.00	0.000	hyaE	b0976	processing of HyaA and HyaB proteins	Energy metabolism	"factor; Energy metabolism, carbon: Aerobic respiration"
10195	10117	1.01	0.003	16271	15349	10156	15810	0.093290	0.076957	B16	2	1305	1.21	0.084	hyaF	b0977	nickel incorporation into hydrogenase-1 proteins	Energy metabolism	"phenotype; Energy metabolism, carbon: Aerobic respiration"
22233	21367	1.04	0.017	26423	23969	21800	25196	0.148675	0.165192	D16	2	1306	-1.11	-0.046	appC	b0978	"probable third cytochrome oxidase, subunit I"	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Electron transport"
249	423	-1.00	0.000	590	449	336	520	0.003068	0.002546	F16	2	1307	1.02	0.010	appB	b0979	"probable third cytochrome oxidase, subunit II"	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Electron transport"
1713	1560	1.10	0.041	2178	2209	1636	2193	0.012943	0.012400	K8	3	2142	1.04	0.019	appA	b0980	phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
373	440	-1.00	0.000	642	420	407	531	0.003134	0.003082	H22	3	2964	1.02	0.007	yccC	b0981	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
822	1056	-1.28	-0.108	2116	2099	939	2108	0.012437	0.007115	L5	2	2422	1.75	0.243	yccY	b0982	putative phosphatase	Putative enzymes	putative enzyme; Not classified
597	464	1.19	0.077	766	732	530	749	0.004419	0.004019	A18	1	449	1.10	0.041	yccZ	b0983	putative function in exopolysaccharide production	Putative factors	phenotype; Not classified
1119	1044	1.07	0.030	2054	2012	1082	2033	0.011997	0.008196	J22	3	2965	1.46	0.165	ymcA	b0984	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
141	-41	1.00	0.000	134	36	50	85	0.000502	0.000379	L22	3	2966	1.00	0.000	ymcB	b0985	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
675	796	-1.18	-0.072	1905	1909	735	1907	0.011252	0.005571	K3	3	206	2.02	0.305	ymcC	b0986	putative regulator	Putative regulatory proteins	putative regulator; Not classified
1161	963	1.21	0.081	773	716	1062	744	0.004392	0.008049	N22	3	2967	-1.83	-0.263	ymcD	b0987	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1486	1163	1.28	0.106	979	985	1325	982	0.005795	0.010037	A13	4	337	-1.73	-0.239	insB_4	b0988	IS1 protein InsB	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
4507	5048	-1.12	-0.049	4224	4015	4778	4119	0.024308	0.036205	H11	4	2636	-1.49	-0.173	cspH	b0989	cold shock-like protein	Putative factors	phenotype; Not classified
100	113	-1.00	0.000	78	69	107	74	0.000435	0.000808	H15	4	1116	-1.00	0.000	cspG	b0990	homolog of Salmonella cold shock protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
377	172	1.00	0.000	294	156	274	225	0.001328	0.002080	P22	3	2968	-1.00	0.000	sfa	b0991	suppresses fabA and ts growth mutation	"Hypothetical, unclassified, unknown"	phenotype; Not classified
653	610	1.07	0.030	515	449	632	482	0.002842	0.004787	B24	3	2969	-1.60	-0.203	yccM	b0992	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
144	485	-1.00	0.000	928	989	314	958	0.005654	0.002381	H16	2	1308	1.88	0.275	torS	b0993	sensor protein torS  (regulator TorR)	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
436	452	-1.00	0.000	358	705	444	532	0.003137	0.003366	J16	2	1309	-1.07	-0.031	torT	b0994	"part of regulation of tor operon, periplasmic"	Regulatory function	"regulator; Energy metabolism, carbon: Anaerobic respiration"
92	168	-1.00	0.000	205	291	130	248	0.001464	0.000989	L16	2	1310	1.00	0.000	torR	b0995	response transcriptional regulator for torA (sensor TorS)	Regulatory function	"regulator; Energy metabolism, carbon: Anaerobic respiration"
1267	1339	-1.06	-0.024	220	372	1303	296	0.001746	0.009874	N16	2	1311	-3.29	-0.517	torC	b0996	"trimethylamine N-oxide reductase, cytochrome c-type subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
693	536	1.29	0.112	372	517	614	445	0.002624	0.004655	P16	2	1312	-1.55	-0.191	torA	b0997	trimethylamine N-oxide reductase subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
824	915	-1.11	-0.045	758	1007	870	883	0.005208	0.006590	B18	2	1313	-1.27	-0.102	torD	b0998	part of trimethylamine-N-oxide oxidoreductase	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
819	751	1.09	0.038	1255	1237	785	1246	0.007352	0.005948	D24	3	2970	1.24	0.092	yccD	b0999	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1377	1783	-1.29	-0.112	1689	1838	1580	1764	0.010407	0.011974	J15	4	1117	-1.15	-0.061	cbpA	b1000	curved DNA-binding protein; functions closely related to DnaJ	Cell processes	factor; Chaperones
117	83	1.00	0.000	257	131	100	194	0.001145	0.000757	F24	3	2971	1.00	0.000	yccE	b1001	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
866	722	1.20	0.079	1117	848	794	982	0.005797	0.006019	M8	3	2143	-1.04	-0.016	agp	b1002	periplasmic glucose-1-phosphatase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
2401	2180	1.10	0.042	5404	5190	2291	5297	0.031256	0.017360	H24	3	2972	1.80	0.255	yccJ	b1003	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3448	3710	-1.08	-0.032	6206	6326	3579	6266	0.036973	0.027121	M13	4	1879	1.36	0.135	wrbA	b1004	trp repressor binding protein; affects association of trp repressor and operator	Regulatory function	regulator; Amino acid biosynthesis: Tryptophan
8195	10004	-1.22	-0.087	11475	9636	9099	10555	0.062283	0.068953	J24	3	2973	-1.11	-0.044	ycdF	b1005	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
530	418	1.06	0.026	526	374	474	450	0.002655	0.003591	N5	2	2423	-1.20	-0.078	ycdG	b1006	putative transport protein	Putative transport proteins	putative transport; Not classified
413	301	1.00	0.000	610	353	357	481	0.002840	0.002705	L24	3	2974	1.00	0.000	b1007	b1007	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
182	254	-1.00	0.000	181	69	218	125	0.000735	0.001651	N24	3	2975	-1.00	0.000	b1008	b1008	putative enzyme	Putative enzymes	putative enzyme; Not classified
1319	1295	1.02	0.008	3157	2287	1307	2722	0.016062	0.009903	O8	3	2144	1.62	0.210	b1009	b1009	putative acetyltransferase	Putative enzymes	putative enzyme; Not classified
2268	2100	1.08	0.034	2030	2172	2184	2101	0.012398	0.016551	N8	2	2976	-1.33	-0.125	b1010	b1010	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1567	1735	-1.11	-0.044	1601	1445	1651	1523	0.008987	0.012511	P5	2	2424	-1.39	-0.144	b1011	b1011	putative synthetase	Putative enzymes	putative enzyme; Not classified
9633	10348	-1.07	-0.031	14157	17818	9991	15987	0.094335	0.075706	B2	4	2977	1.25	0.096	b1012	b1012	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1581	1166	1.36	0.132	2490	3696	1373	3093	0.018250	0.010406	D2	4	2978	1.75	0.244	ycdC	b1013	putative tet operon regulator	Putative regulatory proteins	putative regulator; Not classified
102	119	-1.00	0.000	100	16	110	58	0.000342	0.000835	O13	4	1880	-1.00	0.000	putA	b1014	"proline dehydrogenase, P5C dehydrogenase"	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
3442	2990	1.15	0.061	6351	5905	3216	6128	0.036160	0.024367	I8	4	701	1.48	0.171	putP	b1015	major sodium/proline symporter	Transport and binding proteins	transport; Transport of small molecules: Cations
451	470	-1.00	0.000	525	550	460	537	0.003171	0.003489	F2	4	2979	-1.10	-0.041	b1016	b1016	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2039	2504	-1.23	-0.089	2096	2801	2272	2448	0.014448	0.017214	D18	2	1314	-1.19	-0.076	b1017	b1017	putative cytochrome	Putative enzymes	putative carrier; Not classified
3256	2592	1.26	0.099	5800	5701	2924	5751	0.033932	0.022158	H2	4	2980	1.53	0.185	ycdO	b1018	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1074	1377	-1.28	-0.108	2253	1815	1225	2034	0.012002	0.009285	J2	4	2981	1.29	0.111	ycdB	b1019	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1992	1162	1.71	0.234	1090	1312	1577	1201	0.007086	0.011949	A10	3	2145	-1.69	-0.227	phoH	b1020	"PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation"	Regulatory function	regulator; Central intermediary metabolism: Phosphorus compounds
1245	1370	-1.10	-0.042	3248	4772	1307	4010	0.023662	0.009906	L2	4	2982	2.39	0.378	ycdP	b1021	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1341	1111	1.21	0.082	2048	2155	1226	2101	0.012399	0.009292	N2	4	2983	1.33	0.125	ycdQ	b1022	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1237	894	1.38	0.141	1461	1526	1066	1493	0.008810	0.008076	P2	4	2984	1.09	0.038	ycdR	b1023	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1962	2215	-1.13	-0.053	2725	2472	2089	2598	0.015332	0.015829	B4	4	2985	-1.03	-0.014	ycdS	b1024	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
636	594	1.07	0.030	1059	1258	615	1158	0.006835	0.004659	D4	4	2986	1.47	0.166	ycdT	b1025	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
704	832	-1.18	-0.073	2240	1875	768	2057	0.012139	0.005818	C13	4	338	2.09	0.319	tra5_3	b1026	IS3 putative transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
974	1275	-1.31	-0.117	1644	1696	1125	1670	0.009855	0.008522	F4	4	2987	1.16	0.063	b1027	b1027	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3478	2914	1.19	0.077	3663	3030	3196	3347	0.019749	0.024221	H4	4	2988	-1.23	-0.089	b1028	b1028	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2884	2838	1.02	0.007	2894	3202	2861	3048	0.017984	0.021681	J4	4	2989	-1.21	-0.081	ycdU	b1029	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
427	422	1.00	0.000	512	560	425	536	0.003160	0.003219	L4	4	2990	-1.02	-0.008	b1030	b1030	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
405	520	-1.04	-0.017	1786	681	463	1234	0.007279	0.003506	A19	2	1705	2.08	0.317	ycdV	b1031	putative ribosomal protein	Putative cell structure	putative structure; Not classified
870	1278	-1.47	-0.167	1060	1172	1074	1116	0.006585	0.008139	B7	2	2425	-1.24	-0.092	ycdW	b1033	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
424	709	-1.42	-0.152	1003	971	567	987	0.005824	0.004295	N4	4	2991	1.36	0.132	ycdX	b1034	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
820	827	-1.01	-0.004	1475	1041	824	1258	0.007423	0.006242	P4	4	2992	1.19	0.075	ycdY	b1035	putative oxidoreductase component	Putative enzymes	putative enzyme; Not classified
3315	2833	1.17	0.068	2481	2761	3074	2621	0.015465	0.023294	B6	4	2993	-1.51	-0.178	ycdZ	b1036	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1369	1192	1.15	0.060	1697	1528	1280	1613	0.009516	0.009702	C18	1	450	-1.02	-0.008	csgG	b1037	"curli production assembly/transport component, 2nd curli operon"	Cell structure	structural component; Surface structures
615	531	1.16	0.063	454	231	573	343	0.002021	0.004341	E18	1	451	-1.45	-0.160	csgF	b1038	"curli production assembly/transport component, 2nd curli operon"	Cell structure	structural component; Surface structures
1069	971	1.10	0.042	1374	921	1020	1148	0.006773	0.007731	G18	1	452	-1.14	-0.058	csgE	b1039	"curli production assembly/transport component, 2nd curli operon"	Cell structure	structural component; Surface structures
1075	1230	-1.14	-0.059	1495	1668	1153	1581	0.009332	0.008734	I18	1	453	1.07	0.029	csgD	b1040	putative 2-component transcriptional regulator for 2nd curli operon	Putative regulatory proteins	putative regulator; Not classified
145	87	1.00	0.000	153	119	116	136	0.000800	0.000882	K18	1	454	-1.00	0.000	csgB	b1041	"minor curlin subunit precursor, similar ro CsgA"	Cell structure	structural component; Surface structures
508	465	1.02	0.007	878	677	487	778	0.004588	0.003687	M18	1	455	1.24	0.095	csgA	b1042	"curlin major subunit, coiled surface structures; cryptic"	Regulatory function	regulator; Surface structures
2242	2079	1.08	0.033	2131	2140	2160	2136	0.012601	0.016372	D6	4	2994	-1.30	-0.114	csgC	b1043	putative curli production protein	Putative cell structure	putative structure; Not classified
2077	1933	1.07	0.031	1171	1405	2005	1288	0.007601	0.015195	F6	4	2995	-2.00	-0.301	b1044	b1044	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4004	3247	1.23	0.091	1808	3273	3626	2541	0.014991	0.027475	H6	4	2996	-1.83	-0.263	b1045	b1045	putative polyprotein	"Hypothetical, unclassified, unknown"	orf; Unknown function
4253	3950	1.08	0.032	3544	4016	4102	3780	0.022303	0.031080	J6	4	2997	-1.39	-0.144	ymdC	b1046	putative synthase	Putative enzymes	putative enzyme; Not classified
6604	6547	1.01	0.004	5447	6239	6575	5843	0.034479	0.049827	L6	4	2998	-1.45	-0.160	ymdD	b1047	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1206	1166	1.03	0.014	1170	1158	1186	1164	0.006867	0.008985	L15	4	1118	-1.31	-0.117	mdoG	b1048	periplasmic glucans biosynthesis protein	Cell processes	enzyme; Osmotic adaptation
308	269	1.00	0.000	516	415	289	465	0.002746	0.002188	N15	4	1119	1.00	0.000	mdoH	b1049	membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO)	Cell processes	enzyme; Osmotic adaptation
1080	877	1.23	0.091	1256	1588	979	1422	0.008392	0.007416	N6	4	2999	1.13	0.054	yceK	b1050	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6262	4386	1.43	0.155	21466	20197	5324	20831	0.122920	0.040346	K8	4	702	3.05	0.484	msyB	b1051	acidic protein suppresses mutants lacking function of protein export	Cell processes	"phenotype; Protein, peptide secretion"
137	111	1.00	0.000	367	431	124	399	0.002354	0.000937	P6	4	3000	1.00	0.000	b1052	b1052	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
491	561	-1.12	-0.050	400	692	526	546	0.003219	0.003986	B8	4	3001	-1.24	-0.093	yceE	b1053	putative transport protein	Putative transport proteins	putative transport; Not classified
811	686	1.18	0.073	999	912	748	956	0.005639	0.005671	P15	4	1120	-1.01	-0.002	htrB	b1054	heat shock protein	Cell processes	"factor; Adaptations, atypical conditions"
1158	1294	-1.12	-0.048	1497	1500	1226	1499	0.008843	0.009291	D8	4	3002	-1.05	-0.021	yceA	b1055	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5509	5450	1.01	0.005	7055	6200	5479	6628	0.039108	0.041520	F8	4	3003	-1.06	-0.026	yceI	b1056	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3837	3453	1.11	0.046	2921	3383	3645	3152	0.018599	0.027620	H8	4	3004	-1.49	-0.172	b1057	b1057	putative cytochrome	Putative enzymes	putative enzyme; Not classified
1178	1028	1.15	0.059	1288	1542	1103	1415	0.008351	0.008355	J8	4	3005	-1.00	0.000	yceO	b1058	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
486	1088	-2.18	-0.338	715	1451	787	1083	0.006390	0.005964	D7	2	2426	1.07	0.030	solA	b1059	sarcosine oxidase-like protein	Putative enzymes	putative enzyme; Not classified
2806	2840	-1.01	-0.005	2673	2727	2823	2700	0.015932	0.021392	L8	4	3006	-1.34	-0.128	yceP	b1060	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3063	2877	1.06	0.027	2725	3626	2970	3175	0.018736	0.022503	J11	4	2637	-1.20	-0.080	dinI	b1061	damage-inducible protein I	Cell processes	phenotype; Not classified
3883	3897	-1.00	-0.002	3374	3275	3890	3325	0.019618	0.029478	M20	1	1999	-1.50	-0.177	pyrC	b1062	dihydro-orotase	Nucleotide biosynthesis and metabolism	enzyme; Pyrimidine ribonucleotide biosynthesis
1048	1304	-1.24	-0.095	1137	1659	1176	1398	0.008248	0.008915	N8	4	3007	-1.08	-0.034	yceB	b1063	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2090	1637	1.28	0.106	1752	1939	1864	1845	0.010888	0.014124	H3	1	2316	-1.30	-0.113	grxB	b1064	glutaredoxin 2	"Biosynthesis of cofactors, prosthetic groups and carriers"	"carrier; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione"
202	306	-1.00	0.000	225	442	254	333	0.001967	0.001926	P8	4	3008	1.00	0.000	yceL	b1065	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
13957	14516	-1.04	-0.017	22302	18405	14237	20353	0.120099	0.107882	C19	2	1706	1.11	0.047	rimJ	b1066	acetylation of N-terminal alanine of 30S ribosomal subunit protein S5	"Translation, post-translational modification"	enzyme; Ribosomes - maturation and modification
5451	4101	1.33	0.124	8979	8403	4776	8691	0.051282	0.036190	B10	4	3009	1.42	0.151	yceH	b1067	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1117	1320	-1.18	-0.073	1835	2198	1218	2016	0.011898	0.009232	B17	4	1121	1.29	0.110	mviM	b1068	putative virulence factor	Putative factors	putative factor; Not classified
760	976	-1.28	-0.109	1644	1710	868	1677	0.009894	0.006575	D17	4	1122	1.50	0.178	mviN	b1069	putative virulence factor	Putative factors	putative factor; Not classified
2747	3316	-1.21	-0.082	3847	3972	3031	3910	0.023069	0.022970	F17	4	1123	1.00	0.002	flgN	b1070	protein of flagellar biosynthesis	Cell processes	phenotype; Surface structures
2463	3009	-1.22	-0.087	3585	3854	2736	3720	0.021950	0.020733	H17	4	1124	1.06	0.025	flgM	b1071	anti-FliA (anti-sigma) factor; also known as RflB protein	Regulatory function	factor; Surface structures
1992	2456	-1.23	-0.091	1705	2180	2224	1942	0.011462	0.016850	J17	4	1125	-1.47	-0.167	flgA	b1072	flagellar biosynthesis; assembly of basal-body periplasmic P ring	Cell processes	putative structure; Surface structures
484	588	-1.18	-0.070	554	602	536	578	0.003410	0.004060	L17	4	1126	-1.19	-0.076	flgB	b1073	"flagellar biosynthesis, cell-proximal portion of basal-body rod"	Cell processes	structural component; Surface structures
185	285	-1.00	0.000	132	255	235	193	0.001141	0.001779	N17	4	1127	-1.00	0.000	flgC	b1074	"flagellar biosynthesis, cell-proximal portion of basal-body rod"	Cell processes	structural component; Surface structures
213	264	-1.00	0.000	450	359	239	404	0.002385	0.001809	P17	4	1128	1.00	0.000	flgD	b1075	"flagellar biosynthesis, initiation of hook assembly"	Cell processes	putative structure; Surface structures
5169	4839	1.07	0.029	7055	6954	5004	7004	0.041331	0.037921	B19	4	1129	1.09	0.037	flgE	b1076	"flagellar biosynthesis, hook protein"	Cell processes	structural component; Surface structures
365	483	-1.00	0.000	369	536	424	453	0.002672	0.003216	D19	4	1130	-1.07	-0.030	flgF	b1077	"flagellar biosynthesis, cell-proximal portion of basal-body rod"	Cell processes	structural component; Surface structures
991	1095	-1.11	-0.043	1085	1372	1043	1228	0.007248	0.007907	F19	4	1131	-1.09	-0.038	flgG	b1078	"flagellar biosynthesis, cell-distal portion of basal-body rod"	Cell processes	structural component; Surface structures
909	892	1.02	0.009	444	511	901	477	0.002815	0.006824	H19	4	1132	-2.27	-0.357	flgH	b1079	"flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein"	Cell processes	structural component; Surface structures
14709	14145	1.04	0.017	17516	15985	14427	16751	0.098840	0.109323	J19	4	1133	-1.11	-0.044	flgI	b1080	homolog of Salmonella P-ring of flagella basal body	Cell processes	putative structure; Surface structures
549	605	-1.10	-0.042	626	686	577	656	0.003869	0.004371	L19	4	1134	-1.13	-0.053	flgJ	b1081	flagellar biosynthesis	Cell processes	putative structure; Surface structures
786	822	-1.05	-0.019	491	465	804	478	0.002821	0.006090	N19	4	1135	-2.03	-0.308	flgK	b1082	"flagellar biosynthesis, hook-filament junction protein 1"	Cell processes	structural component; Surface structures
550	568	-1.03	-0.014	765	792	559	779	0.004595	0.004235	P19	4	1136	1.09	0.035	flgL	b1083	flagellar biosynthesis; hook-filament junction protein	Cell processes	structural component; Surface structures
3894	4368	-1.12	-0.050	3011	4251	4131	3631	0.021426	0.031306	H22	4	1524	-1.46	-0.165	rne	b1084	"RNase E, membrane attachment, mRNA turnover, maturation 5S RNA"	"Transcription, RNA processing and degradation"	enzyme; Degradation of RNA
933	1013	-1.09	-0.036	739	951	973	845	0.004987	0.007375	D10	4	3010	-1.48	-0.170	b1085	b1085	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2343	2315	1.01	0.005	2578	2674	2329	2626	0.015496	0.017648	F10	4	3011	-1.14	-0.056	yceC	b1086	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7443	6857	1.09	0.036	8667	6716	7150	7692	0.045387	0.054179	H10	4	3012	-1.19	-0.077	yceF	b1087	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3988	3233	1.23	0.091	6886	6919	3610	6903	0.040730	0.027358	J10	4	3013	1.49	0.173	yceD	b1088	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7574	8263	-1.09	-0.038	15661	14763	7918	15212	0.089760	0.060004	E19	2	1707	1.50	0.175	rpmF	b1089	50S ribosomal subunit protein L32	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
1387	1210	1.15	0.059	2279	1941	1298	2110	0.012449	0.009837	M8	2	2047	1.27	0.102	plsX	b1090	glycerolphosphate auxotrophy in plsB background	Fatty acid and phospholipid metabolism	"phenotype; Macromolecule synthesis, modification: Phospholipids"
834	1180	-1.41	-0.151	718	1206	1007	962	0.005679	0.007631	O8	2	2048	-1.34	-0.128	fabH	b1091	3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
1223	1752	-1.43	-0.156	1917	1725	1488	1821	0.010745	0.011274	A10	2	2049	-1.05	-0.021	fabD	b1092	malonyl-CoA-[acyl-carrier-protein] transacylase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
7066	6428	1.10	0.041	7062	5521	6747	6291	0.037122	0.051124	C10	2	2050	-1.38	-0.139	fabG	b1093	3-oxoacyl-[acyl-carrier-protein] reductase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
7077	7360	-1.04	-0.017	11081	16930	7218	14006	0.082644	0.054700	E10	2	2051	1.51	0.179	acpP	b1094	acyl carrier protein	Fatty acid and phospholipid metabolism	carrier; Fatty acid and phosphatidic acid biosynthesis
1030	1588	-1.54	-0.188	1580	1532	1309	1556	0.009182	0.009918	G10	2	2052	-1.08	-0.034	fabF	b1095	3-oxoacyl-[acyl-carrier-protein] synthase II	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
1346	1017	1.32	0.122	1255	1021	1181	1138	0.006714	0.008952	J3	1	2317	-1.33	-0.125	pabC	b1096	4-amino-4-deoxychorismate lyase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Folic acid"
1516	1695	-1.12	-0.048	2123	1767	1606	1945	0.011476	0.012168	F7	2	2427	-1.06	-0.025	yceG	b1097	putative thymidylate kinase (EC 2.7.4.9)	Putative enzymes	putative enzyme; Not classified
20458	18313	1.12	0.048	18610	19450	19385	19030	0.112288	0.146898	O20	1	2000	-1.31	-0.117	tmk	b1098	thymidylate kinase	Nucleotide biosynthesis and metabolism	enzyme; 2'-Deoxyribonucleotide metabolism
697	548	1.27	0.105	598	658	623	628	0.003706	0.004718	J22	4	1525	-1.27	-0.105	holB	b1099	"DNA polymerase III, delta prime subunit"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1824	1573	1.16	0.064	1541	1708	1698	1624	0.009585	0.012869	L10	4	3014	-1.34	-0.128	ycfH	b1100	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
488	476	1.00	0.000	598	588	482	593	0.003498	0.003650	M8	4	703	-1.04	-0.019	ptsG	b1101	"PTS system, glucose-specific IIBC component"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1066	835	1.28	0.106	1342	1612	950	1477	0.008717	0.007201	O8	4	704	1.21	0.083	fhuE	b1102	outer membrane receptor for ferric iron uptake	Transport and binding proteins	transport; Transport of small molecules: Cations
2986	2582	1.16	0.063	1940	1773	2784	1857	0.010955	0.021095	N10	4	3015	-1.93	-0.285	ycfF	b1103	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
631	510	1.24	0.093	747	641	570	694	0.004097	0.004321	P10	4	3016	-1.05	-0.023	ycfL	b1104	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3957	4021	-1.02	-0.007	4042	4257	3989	4149	0.024484	0.030228	B12	4	3017	-1.23	-0.092	ycfM	b1105	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
10076	8853	1.14	0.056	11764	10790	9465	11277	0.066539	0.071721	E7	1	27	-1.08	-0.033	ycfN	b1106	putative beta-glucosidase (EC 3.2.1.21)	Putative enzymes	putative enzyme; Not classified
7680	8262	-1.08	-0.032	10670	13008	7971	11839	0.069857	0.060400	D12	4	3018	1.16	0.063	ycfO	b1107	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5277	5446	-1.03	-0.014	4939	5420	5362	5180	0.030563	0.040629	F12	4	3019	-1.33	-0.124	ycfP	b1108	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1563	1838	-1.18	-0.071	1807	2289	1700	2048	0.012086	0.012886	F18	2	1315	-1.07	-0.028	ndh	b1109	respiratory NADH dehydrogenase	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
5738	5070	1.13	0.054	6076	5360	5404	5718	0.033741	0.040950	H12	4	3020	-1.21	-0.084	ycfJ	b1110	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2183	2115	1.03	0.014	2686	2800	2149	2743	0.016186	0.016288	J12	4	3021	-1.01	-0.003	ycfQ	b1111	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1557	1901	-1.22	-0.087	1891	1662	1729	1777	0.010483	0.013101	L12	4	3022	-1.25	-0.097	ycfR	b1112	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3003	2892	1.04	0.016	2902	3159	2947	3030	0.017882	0.022335	N12	4	3023	-1.25	-0.097	ycfS	b1113	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
424	369	1.00	0.000	205	218	397	211	0.001247	0.003006	L22	4	1526	-1.00	-0.001	mfd	b1114	transcription-repair coupling factor; mutation frequency decline	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
1331	1133	1.18	0.070	1080	847	1232	963	0.005684	0.009333	P12	4	3024	-1.64	-0.215	ycfT	b1115	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5916	6288	-1.06	-0.026	4869	5209	6102	5039	0.029734	0.046239	B14	4	3025	-1.56	-0.192	ycfU	b1116	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
38605	34612	1.12	0.047	58543	52197	36608	55370	0.326721	0.277408	D14	4	3026	1.18	0.071	ycfV	b1117	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
1071	1112	-1.04	-0.016	1476	1575	1091	1525	0.009001	0.008268	H7	2	2428	1.09	0.037	ycfW	b1118	putative kinase	Putative enzymes	putative enzyme; Not classified
581	605	-1.04	-0.017	902	699	593	801	0.004724	0.004494	M3	3	207	1.05	0.022	ycfX	b1119	putative NAGC-like transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
4511	4734	-1.05	-0.021	4268	4831	4623	4550	0.026846	0.035030	F14	4	3027	-1.30	-0.116	cobB	b1120	"putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"putative enzyme; Biosynthesis of cofactors, carriers: Cobalamin"
4596	4374	1.05	0.022	5987	5811	4485	5899	0.034809	0.033986	H14	4	3028	1.02	0.010	b1121	b1121	homolog of virulence factor	Putative factors	putative factor; Not classified
4919	4622	1.06	0.027	11041	11438	4770	11240	0.066322	0.036148	J14	4	3029	1.83	0.264	ymfA	b1122	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7644	7179	1.06	0.027	18750	17038	7411	17894	0.105585	0.056162	A10	4	705	1.88	0.274	potD	b1123	spermidine/putrescine periplasmic transport protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
4388	4016	1.09	0.038	6591	7156	4202	6873	0.040557	0.031842	C10	4	706	1.27	0.105	potC	b1124	spermidine/putrescine transport system permease	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1635	1800	-1.10	-0.042	2641	3315	1717	2978	0.017572	0.013015	E10	4	707	1.35	0.130	potB	b1125	spermidine/putrescine transport system permease	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
4096	3456	1.19	0.074	4710	4512	3776	4611	0.027209	0.028614	G10	4	708	-1.05	-0.022	potA	b1126	ATP-binding component of spermidine/putrescine transport	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
2431	2726	-1.12	-0.050	3252	3250	2579	3251	0.019183	0.019543	G19	2	1708	-1.02	-0.008	pepT	b1127	putative peptidase T	Putative enzymes	putative enzyme; Not classified
2167	2468	-1.14	-0.057	2526	2889	2318	2707	0.015976	0.017562	L14	4	3030	-1.10	-0.041	ycfD	b1128	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
626	790	-1.26	-0.101	978	1055	708	1016	0.005997	0.005368	A11	2	137	1.12	0.048	phoQ	b1129	sensor protein PhoQ	Regulatory function	enzyme; Global regulatory functions
821	766	1.07	0.030	1207	1224	794	1215	0.007172	0.006015	C11	2	138	1.19	0.076	phoP	b1130	transcriptional regulatory protein	Regulatory function	regulator; Global regulatory functions
3618	2941	1.23	0.090	4006	3145	3280	3576	0.021100	0.024853	A22	1	2001	-1.18	-0.071	purB	b1131	adenylosuccinate lyase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
2750	2598	1.06	0.025	2483	2490	2674	2486	0.014671	0.020265	N14	4	3031	-1.38	-0.140	ycfC	b1132	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1498	1453	1.03	0.013	1229	1288	1475	1259	0.007426	0.011181	P14	4	3032	-1.51	-0.178	ycfB	b1133	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
527	485	1.05	0.023	436	439	506	437	0.002581	0.003832	J7	2	2429	-1.28	-0.106	b1134	b1134	putative phosphohydrolase	Putative enzymes	putative enzyme; Not classified
3725	3089	1.21	0.081	4261	4761	3407	4511	0.026616	0.025820	B16	4	3033	1.03	0.013	ymfC	b1135	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
9280	9485	-1.02	-0.010	11123	10576	9382	10850	0.064020	0.071096	H18	2	1316	-1.11	-0.046	icdA	b1136	"isocitrate dehydrogenase, specific for NADP+"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
2841	3203	-1.13	-0.052	3175	4126	3022	3651	0.021543	0.022898	D16	4	3034	-1.06	-0.027	ymfD	b1137	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1648	1544	1.07	0.028	1911	1991	1596	1951	0.011514	0.012093	F16	4	3035	-1.05	-0.021	ymfE	b1138	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
180	127	1.00	0.000	157	192	154	175	0.001030	0.001165	E13	4	339	-1.00	0.000	lit	b1139	phage T4 late gene expression; at locus of e14 element	"Phage, transposon, or plasmid"	membrane; Phage-related functions and prophages
4904	5051	-1.03	-0.013	7659	7824	4978	7741	0.045679	0.037720	G13	4	340	1.21	0.083	intE	b1140	prophage e14 integrase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
4247	4148	1.02	0.010	10706	10337	4198	10521	0.062083	0.031808	H16	4	3036	1.95	0.290	b1141	b1141	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1645	1692	-1.03	-0.012	2043	2324	1668	2183	0.012884	0.012643	J16	4	3037	1.02	0.008	ymfH	b1142	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2028	1861	1.09	0.037	2245	2645	1945	2445	0.014427	0.014735	L16	4	3038	-1.02	-0.009	ymfI	b1143	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
245	255	-1.00	0.000	138	423	250	280	0.001655	0.001895	N16	4	3039	-1.00	0.000	ymfJ	b1144	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
136	423	-1.00	0.000	911	920	279	915	0.005401	0.002116	I13	4	341	1.80	0.255	b1145	b1145	putative phage repressor	"Phage, transposon, or plasmid"	"IS, phage, Tn; Not classified"
625	442	1.25	0.097	572	800	534	686	0.004049	0.004043	P16	4	3040	1.00	0.001	b1146	b1146	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1392	1247	1.12	0.048	1653	1859	1320	1756	0.010360	0.010000	B18	4	3041	1.04	0.015	ymfL	b1147	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1599	1229	1.30	0.114	1654	1758	1414	1706	0.010067	0.010714	D18	4	3042	-1.06	-0.027	ymfM	b1148	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3616	3345	1.08	0.034	4479	3411	3481	3945	0.023276	0.026376	F18	4	3043	-1.13	-0.054	ymfN	b1149	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3182	3710	-1.17	-0.067	3111	3519	3446	3315	0.019559	0.026111	H18	4	3044	-1.33	-0.125	ymfR	b1150	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8192	8035	1.02	0.008	9544	8841	8113	9192	0.054240	0.061481	J18	4	3045	-1.13	-0.054	ymfO	b1151	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6689	7054	-1.05	-0.023	10236	7035	6872	8636	0.050957	0.052072	L18	4	3046	-1.02	-0.009	b1152	b1152	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
288	441	-1.00	0.000	659	318	365	489	0.002883	0.002764	N18	4	3047	1.00	0.000	b1153	b1153	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
141	141	1.00	0.000	149	250	141	200	0.001178	0.001068	P18	4	3048	1.00	0.000	ycfK	b1154	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4893	4770	1.03	0.011	5644	5644	4831	5644	0.033303	0.036612	B20	4	3049	-1.10	-0.041	b1155	b1155	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
11173	8206	1.36	0.134	10279	12069	9689	11174	0.065937	0.073422	D20	4	3050	-1.11	-0.047	ycfA	b1156	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
106	148	-1.00	0.000	321	384	127	352	0.002079	0.000963	K13	4	342	1.00	0.000	b1157	b1157	putative tail fiber protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Not classified"
393	428	-1.00	0.000	161	308	411	235	0.001385	0.003111	M13	4	343	-1.04	-0.016	pin	b1158	inversion of adjacent DNA; at locus of e14 element	"Phage, transposon, or plasmid"	membrane; Phage-related functions and prophages
1326	1184	1.12	0.049	1144	1051	1255	1098	0.006476	0.009510	O21	1	1624	-1.47	-0.167	mcrA	b1159	restriction of DNA at 5-methylcytosine residues; at locus of e14 element	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
1852	1999	-1.08	-0.033	3134	3253	1925	3194	0.018844	0.014591	F20	4	3051	1.29	0.111	ycgW	b1160	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1907	2513	-1.32	-0.120	3605	3997	2210	3801	0.022427	0.016747	H20	4	3052	1.34	0.127	ycgX	b1161	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
899	1254	-1.39	-0.145	957	860	1076	909	0.005362	0.008156	O3	3	208	-1.52	-0.182	ycgE	b1162	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1681	1929	-1.15	-0.060	1878	1942	1805	1910	0.011270	0.013678	J20	4	3053	-1.21	-0.084	b1163	b1163	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
209	191	1.00	0.000	382	117	200	250	0.001473	0.001516	L20	4	3054	-1.00	0.000	ycgZ	b1164	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
148	78	1.00	0.000	208	257	113	233	0.001373	0.000855	N20	4	3055	1.00	0.000	ymgA	b1165	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
546	708	-1.30	-0.113	125	146	627	136	0.000800	0.004751	P20	4	3056	-1.58	-0.200	ymgB	b1166	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1531	1583	-1.03	-0.015	931	1123	1557	1027	0.006061	0.011799	B22	4	3057	-1.95	-0.289	ymgC	b1167	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1008	1073	-1.07	-0.027	1101	1373	1040	1237	0.007301	0.007884	L7	2	2430	-1.08	-0.033	b1168	b1168	putative proteases	Putative enzymes	putative enzyme; Not classified
1175	989	1.19	0.075	558	173	1082	366	0.002157	0.008198	D22	4	3058	-2.73	-0.437	b1169	b1169	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
3447	3477	-1.01	-0.004	8166	8079	3462	8122	0.047928	0.026232	F22	4	3059	1.83	0.262	b1170	b1170	putative part of putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
769	739	1.04	0.017	1420	1407	754	1414	0.008341	0.005713	H22	4	3060	1.46	0.164	b1171	b1171	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1077	1085	-1.01	-0.003	782	1187	1081	985	0.005810	0.008191	J22	4	3061	-1.41	-0.149	b1172	b1172	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
399	375	1.00	0.000	379	271	387	325	0.001917	0.002932	L22	4	3062	-1.00	0.000	b1173	b1173	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
13779	14017	-1.02	-0.007	16542	13188	13898	14865	0.087714	0.105313	B21	4	1137	-1.20	-0.079	minE	b1174	"cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation"	Cell processes	factor; Cell division
5134	5315	-1.04	-0.015	5567	5636	5224	5601	0.033052	0.039589	D21	4	1138	-1.20	-0.078	minD	b1175	"cell division inhibitor, a membrane ATPase, activates minC"	Cell processes	enzyme; Cell division
3402	2425	1.40	0.147	2566	2521	2914	2544	0.015010	0.022079	F21	4	1139	-1.47	-0.168	minC	b1176	"cell division inhibitor, inhibits ftsZ ring formation"	Cell processes	factor; Cell division
285	374	-1.00	0.000	339	482	329	410	0.002422	0.002495	N22	4	3063	-1.00	0.000	ycgJ	b1177	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
355	410	-1.00	0.000	425	592	383	509	0.003001	0.002900	P22	4	3064	1.00	0.000	ycgK	b1178	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4712	4994	-1.06	-0.025	2730	4001	4853	3365	0.019858	0.036775	B24	4	3065	-1.85	-0.268	ycgL	b1179	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
965	1029	-1.07	-0.027	675	892	997	783	0.004622	0.007555	N7	2	2431	-1.63	-0.213	b1180	b1180	putative isomerase	Putative enzymes	putative enzyme; Not classified
5103	5162	-1.01	-0.005	5695	7070	5133	6382	0.037659	0.038894	D24	4	3066	-1.03	-0.014	ycgN	b1181	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
390	403	-1.00	0.000	712	614	397	663	0.003912	0.003006	F24	4	3067	1.30	0.114	hlyE	b1182	hemolysin E	"Hypothetical, unclassified, unknown"	phenotype; Not classified
39	115	-1.00	0.000	80	135	77	107	0.000632	0.000584	N22	4	1527	1.00	0.000	umuD	b1183	SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC	"DNA replication, repair, restriction/modification"	"putative enzyme; DNA - replication, repair, restriction/modification"
715	561	1.28	0.106	685	310	638	498	0.002937	0.004836	P22	4	1528	-1.61	-0.207	umuC	b1184	SOS mutagenesis and repair	"DNA replication, repair, restriction/modification"	"putative enzyme; DNA - replication, repair, restriction/modification"
317	293	1.00	0.000	307	333	305	320	0.001888	0.002310	O18	1	456	-1.00	0.000	dsbB	b1185	reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella.	Cell structure	enzyme; Surface structures
1647	1313	1.25	0.099	2830	2699	1480	2765	0.016315	0.011212	I10	4	709	1.46	0.163	nhaB	b1186	"Na+/H+ antiporter, pH independent"	Transport and binding proteins	transport; Transport of small molecules: Cations
-43	806	-1.61	-0.207	-359	1087	382	364	0.002146	0.002892	I10	2	2053	-1.00	0.000	fadR	b1187	"negative regulator for fad regulon, and positive activator of fabA"	Regulatory function	regulator; Degradation of small molecules: Fatty acids
3159	3598	-1.14	-0.057	4377	4982	3378	4679	0.027611	0.025598	H24	4	3068	1.08	0.033	ycgB	b1188	putative sporulation protein	Putative factors	putative factor; Not classified
619	655	-1.06	-0.024	1199	1435	637	1317	0.007771	0.004829	A15	4	1881	1.61	0.207	dadA	b1189	D-amino acid dehydrogenase subunit	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
779	847	-1.09	-0.037	820	626	813	723	0.004264	0.006161	C15	4	1882	-1.44	-0.160	dadX	b1190	"alanine racemase 2, catabolic"	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
242561	263840	-1.09	-0.037	133958	136269	253200	135114	0.797265	1.918692	J24	4	3069	-2.41	-0.381	b1191	b1191	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
537	574	-1.07	-0.029	680	475	556	578	0.003409	0.004212	L24	4	3070	-1.24	-0.092	b1192	b1192	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4630	5374	-1.16	-0.065	7090	8606	5002	7848	0.046308	0.037901	N24	4	3071	1.22	0.087	mltE	b1193	murein transglycosylase E	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
2189	2078	1.05	0.022	4847	4913	2134	4880	0.028795	0.016167	P8	2	3072	1.78	0.251	ycgR	b1194	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
316	219	1.00	0.000	304	340	268	322	0.001902	0.002029	B10	2	3073	-1.00	0.000	ymgE	b1195	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
331	369	-1.00	0.000	458	311	350	385	0.002269	0.002651	C1	1	3074	-1.00	0.000	ycgY	b1196	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5429	5466	-1.01	-0.003	10105	6742	5448	8424	0.049707	0.041280	H21	4	1140	1.20	0.081	treA	b1197	"trehalase, periplasmic"	Cell processes	enzyme; Osmotic adaptation
962	1045	-1.09	-0.036	807	715	1004	761	0.004490	0.007605	P7	2	2432	-1.69	-0.229	ycgC	b1198	putative PTS system enzyme I	Putative transport proteins	putative transport; Not classified
931	1105	-1.19	-0.075	1048	867	1018	957	0.005650	0.007714	B9	2	2433	-1.37	-0.135	b1199	b1199	putative dihydroxyacetone kinase (EC 2.7.1.2)	Putative enzymes	putative enzyme; Not classified
656	791	-1.21	-0.081	195	365	723	280	0.001650	0.005480	D9	2	2434	-1.83	-0.262	b1200	b1200	putative dihydroxyacetone kinase (EC 2.7.1.2)	Putative enzymes	putative enzyme; Not classified
3733	3577	1.04	0.019	6804	5357	3655	6081	0.035879	0.027698	A5	3	209	1.30	0.112	b1201	b1201	putative sensor-type regulator	Putative regulatory proteins	putative regulator; Not classified
67	71	-1.00	0.000	133	28	69	80	0.000475	0.000523	I2	3	581	-1.00	0.000	b1202	b1202	putative adhesion and penetration protein	Putative factors	putative factor; Not classified
516	632	-1.23	-0.088	957	823	574	890	0.005252	0.004347	E1	1	3075	1.21	0.082	ychF	b1203	putative GTP-binding protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
42	167	-1.00	0.000	89	338	105	213	0.001260	0.000792	I19	2	1709	1.00	0.000	pth	b1204	peptidyl-tRNA hydrolase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
731	656	1.11	0.047	548	452	693	500	0.002952	0.005255	G1	1	3076	-1.75	-0.243	ychH	b1205	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
12081	11360	1.06	0.027	8399	10845	11721	9622	0.056774	0.088816	I1	1	3077	-1.56	-0.194	ychM	b1206	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2756	2678	1.03	0.012	2275	1895	2717	2085	0.012305	0.020588	C22	1	2002	-1.67	-0.224	prsA	b1207	phosphoribosylpyrophosphate synthetase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
2541	2252	1.13	0.052	1688	1883	2396	1785	0.010535	0.018158	K1	1	3078	-1.72	-0.236	ychB	b1208	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
862	812	1.06	0.026	1727	1290	837	1509	0.008901	0.006342	L3	1	2318	1.40	0.147	hemM	b1209	"an enzyme in main pathway of synthesis of 5-aminolevulinate, possibly glutamyl-tRNA dehydrogenase"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
346	310	1.00	0.000	397	429	328	413	0.002436	0.002486	N3	1	2319	-1.00	0.000	hemA	b1210	enzyme in alternate path of synthesis of 5-aminolevulinate	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
2798	2646	1.06	0.024	2667	3106	2722	2887	0.017034	0.020625	K19	2	1710	-1.21	-0.083	prfA	b1211	peptide chain release factor RF-1	"Translation, post-translational modification"	factor; Proteins - translation and modification
314	304	1.00	0.000	304	302	309	303	0.001788	0.002343	P3	1	2320	-1.00	0.000	hemK	b1212	possible protoporphyrinogen oxidase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"putative enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
237	152	1.00	0.000	263	93	195	178	0.001050	0.001475	M1	1	3079	-1.00	0.000	b1213	b1213	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
984	1037	-1.05	-0.023	1326	1229	1010	1277	0.007537	0.007654	O1	1	3080	-1.02	-0.007	ychA	b1214	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1213	1239	-1.02	-0.009	1950	1865	1226	1907	0.011256	0.009289	A20	1	457	1.21	0.083	kdsA	b1215	2-dehydro-3-deoxyphosphooctulonate aldolase	Cell structure	enzyme; Surface polysaccharides & antigens
415	510	-1.02	-0.009	549	579	462	564	0.003327	0.003504	K10	4	710	-1.05	-0.022	chaA	b1216	sodium-calcium/proton antiporter	Transport and binding proteins	transport; Transport of small molecules: Cations
259	417	-1.00	0.000	444	391	338	418	0.002464	0.002560	M10	4	711	-1.00	0.000	chaB	b1217	cation transport regulator	Regulatory function	regulator; Transport of small molecules: Cations
374	513	-1.03	-0.011	639	876	443	758	0.004472	0.003360	O10	4	712	1.33	0.124	chaC	b1218	cation transport regulator	Transport and binding proteins	transport; Transport of small molecules: Cations
1120	1277	-1.14	-0.057	1320	1215	1199	1268	0.007479	0.009082	A3	1	3081	-1.21	-0.084	ychN	b1219	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2121	1901	1.12	0.048	4073	3742	2011	3908	0.023059	0.015241	M6	3	599	1.51	0.180	ychP	b1220	putative factor	Putative factors	putative factor; Not classified
1011	996	1.01	0.006	1193	1650	1003	1422	0.008388	0.007601	J18	2	1317	1.10	0.043	narL	b1221	"pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes"	Regulatory function	"regulator; Energy metabolism, carbon: Anaerobic respiration"
411	481	-1.00	0.000	723	1284	446	1003	0.005919	0.003381	L18	2	1318	1.75	0.243	narX	b1222	"nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
5010	4613	1.09	0.036	10934	11042	4812	10988	0.064837	0.036462	A12	4	713	1.78	0.250	narK	b1223	nitrite extrusion protein	Transport and binding proteins	transport; Transport of small molecules: Anions
2701	3449	-1.28	-0.106	3995	4006	3075	4001	0.023607	0.023303	N18	2	1319	1.01	0.006	narG	b1224	"nitrate reductase 1, alpha subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
2190	2247	-1.03	-0.011	2987	4393	2219	3690	0.021773	0.016812	P18	2	1320	1.30	0.112	narH	b1225	"nitrate reductase 1, beta subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
5606	4863	1.15	0.062	9379	8338	5235	8859	0.052272	0.039667	B20	2	1321	1.32	0.120	narJ	b1226	"nitrate reductase 1, delta subunit, assembly function"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
501	539	-1.08	-0.032	752	833	520	793	0.004677	0.003939	D20	2	1322	1.19	0.075	narI	b1227	"nitrate reductase 1, cytochrome b(NR), gamma subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
107	12	1.00	0.000	89	51	60	70	0.000413	0.000452	C3	1	3082	-1.00	0.000	b1228	b1228	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
22	85	-1.00	0.000	12	66	53	39	0.000228	0.000405	B24	4	1529	-1.00	0.000	tpr	b1229	a protaminelike protein	"DNA replication, repair, restriction/modification"	"factor; Basic proteins - synthesis, modification"
2488	2201	1.13	0.053	1812	2304	2344	2058	0.012142	0.017765	E22	1	2003	-1.46	-0.165	purU	b1232	formyltetrahydrofolate deformylase; for purT-dependent FGAR synthesis	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
408	457	-1.00	0.000	468	350	433	409	0.002412	0.003278	E3	1	3083	-1.09	-0.038	ychJ	b1233	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1713	2006	-1.17	-0.069	2065	1853	1860	1959	0.011558	0.014093	G3	1	3084	-1.22	-0.086	ychK	b1234	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3881	4268	-1.10	-0.041	5018	5281	4075	5150	0.030386	0.030878	D24	4	1530	-1.02	-0.007	hnr	b1235	Hnr protein	Regulatory function	"regulator; Basic proteins - synthesis, modification"
619	593	1.04	0.019	1678	1692	606	1685	0.009943	0.004591	G7	1	28	2.17	0.336	galU	b1236	glucose-1-phosphate uridylyltransferase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
6659	6070	1.10	0.040	13538	11595	6364	12566	0.074151	0.048227	F24	4	1531	1.54	0.187	hns	b1237	"DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator"	Regulatory function	"regulator; Basic proteins - synthesis, modification"
835	894	-1.07	-0.030	1577	1023	864	1300	0.007673	0.006549	G22	1	2004	1.17	0.069	tdk	b1238	thymidine kinase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
582	560	1.04	0.016	321	371	571	346	0.002044	0.004328	I3	1	3085	-1.44	-0.159	ychG	b1239	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5715	5075	1.13	0.052	10434	6639	5395	8536	0.050371	0.040884	K3	1	3086	1.23	0.091	b1240	b1240	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4351	5139	-1.18	-0.072	6023	4730	4745	5377	0.031726	0.035956	F20	2	1323	-1.13	-0.054	adhE	b1241	CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
532	614	-1.15	-0.062	381	425	573	403	0.002380	0.004343	J21	2	949	-1.45	-0.161	ychE	b1242	putative channel protein	Putative transport proteins	putative transport; Not classified
15160	15516	-1.02	-0.010	25135	21656	15338	23395	0.138048	0.116227	C12	4	714	1.19	0.075	oppA	b1243	oligopeptide transport; periplasmic binding protein	Transport and binding proteins	"transport; Protein, peptide secretion"
1000	651	1.54	0.186	688	693	826	690	0.004073	0.006259	E12	4	715	-1.54	-0.187	oppB	b1244	oligopeptide transport permease protein	Transport and binding proteins	"transport; Protein, peptide secretion"
1330	1189	1.12	0.049	981	965	1259	973	0.005743	0.009543	G12	4	716	-1.66	-0.221	oppC	b1245	homolog of Salmonella oligopeptide transport permease protein	Putative transport proteins	putative transport; Not classified
992	804	1.23	0.091	984	1019	898	1002	0.005911	0.006803	I12	4	717	-1.15	-0.061	oppD	b1246	homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system	Putative transport proteins	putative transport; Not classified
393	323	1.00	0.000	545	670	358	607	0.003582	0.002710	K12	4	718	1.19	0.077	oppF	b1247	homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system	Putative transport proteins	putative transport; Not classified
541	486	1.08	0.035	1006	1023	514	1014	0.005985	0.003892	M3	1	3087	1.54	0.187	b1248	b1248	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
398	597	-1.19	-0.077	505	673	498	589	0.003476	0.003772	K10	2	2054	-1.09	-0.035	cls	b1249	"cardiolipin synthase, a major membrane phospholipid; novobiocin sensitivity"	Fatty acid and phospholipid metabolism	"enzyme; Macromolecule synthesis, modification: Phospholipids"
5288	5636	-1.07	-0.028	6178	7048	5462	6613	0.039020	0.041392	M12	4	719	-1.06	-0.026	kch	b1250	putative potassium channel protein	Putative transport proteins	putative transport; Not classified
1010	1237	-1.23	-0.088	1684	1516	1124	1600	0.009441	0.008514	O3	1	3088	1.11	0.045	yciI	b1251	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
809	1246	-1.54	-0.188	1794	1430	1027	1612	0.009512	0.007784	O12	4	720	1.22	0.087	tonB	b1252	"energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins"	Transport and binding proteins	membrane; Transport of small molecules: Cations
809	648	1.25	0.096	183	234	728	209	0.001231	0.005520	A5	1	3089	-1.84	-0.265	yciA	b1253	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
425	175	1.00	0.000	256	140	300	198	0.001166	0.002274	C5	1	3090	-1.00	0.000	yciB	b1254	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
521	395	1.04	0.017	524	186	458	355	0.002095	0.003469	E5	1	3091	-1.16	-0.063	yciC	b1255	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
561	643	-1.15	-0.060	2607	2362	602	2485	0.014661	0.004562	C20	1	458	3.21	0.507	yciD	b1256	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
8785	8451	1.04	0.017	10253	9419	8618	9836	0.058040	0.065307	G5	1	3092	-1.13	-0.051	yciE	b1257	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
434	555	-1.11	-0.045	1810	1644	494	1727	0.010189	0.003746	O6	3	600	2.72	0.435	yciF	b1258	putative structural proteins	Putative cell structure	putative structure; Not classified
1146	1025	1.12	0.048	2186	1708	1086	1947	0.011488	0.008227	I5	1	3093	1.40	0.145	yciG	b1259	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2995	3214	-1.07	-0.031	6468	6367	3105	6417	0.037866	0.023526	E15	4	1883	1.61	0.207	trpA	b1260	"tryptophan synthase, alpha protein"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Tryptophan
4382	4737	-1.08	-0.034	9171	9845	4560	9508	0.056105	0.034552	G15	4	1884	1.62	0.211	trpB	b1261	"tryptophan synthase, beta protein"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Tryptophan
3848	4253	-1.11	-0.043	6839	7563	4051	7201	0.042493	0.030695	I15	4	1885	1.38	0.141	trpC	b1262	N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Tryptophan
12585	11502	1.09	0.039	18146	19708	12043	18927	0.111682	0.091262	K15	4	1886	1.22	0.088	trpD	b1263	"anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Tryptophan
3378	3531	-1.05	-0.019	5161	5478	3455	5320	0.031390	0.026178	M15	4	1887	1.20	0.079	trpE	b1264	anthranilate synthase component I	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Tryptophan
37	34	1.00	0.000	377	390	36	383	0.002262	0.000272	O15	4	1888	1.00	0.000	trpL	b1265	trp operon leader peptide	Amino acid biosynthesis	leader; Amino acid biosynthesis: Tryptophan
933	1209	-1.30	-0.112	1700	1992	1071	1846	0.010893	0.008117	F9	2	2435	1.34	0.128	yciV	b1266	putative enzymes	Putative enzymes	putative enzyme; Not classified
619	455	1.24	0.093	598	449	537	523	0.003088	0.004067	K5	1	3094	-1.32	-0.120	yciO	b1267	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
26817	29075	-1.08	-0.035	60633	58556	27946	59594	0.351649	0.211768	M5	1	3095	1.66	0.220	yciQ	b1268	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2959	2716	1.09	0.037	3186	2490	2837	2838	0.016744	0.021502	O5	1	3096	-1.28	-0.109	yciL	b1269	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1242	1214	1.02	0.010	1051	822	1228	937	0.005528	0.009307	B5	1	2321	-1.68	-0.226	btuR	b1270	cob(I)alamin adenolsyltransferase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Cobalamin"
641	1032	-1.61	-0.207	878	1935	837	1406	0.008299	0.006340	H9	2	2436	1.31	0.117	yciK	b1271	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
11758	13015	-1.11	-0.044	17171	16977	12387	17074	0.100750	0.093863	M19	2	1711	1.07	0.031	sohB	b1272	putative protease	Putative enzymes	putative enzyme; Not classified
220	185	1.00	0.000	197	215	203	206	0.001216	0.001535	A7	1	3097	-1.00	0.000	yciN	b1273	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3191	2991	1.07	0.028	3721	3999	3091	3860	0.022776	0.023423	H24	4	1532	-1.03	-0.012	topA	b1274	"DNA topoisomerase type I, omega protein"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
902	917	-1.02	-0.007	855	855	909	855	0.005044	0.006889	A17	4	1889	-1.37	-0.135	cysB	b1275	positive transcriptional regulator for cysteine regulon	Regulatory function	transport; Amino acid biosynthesis: Cysteine
1331	1688	-1.27	-0.103	1868	1674	1510	1771	0.010450	0.011440	H20	2	1324	-1.09	-0.039	acnA	b1276	aconitate hydrase 1	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
564	463	1.13	0.052	722	491	514	606	0.003578	0.003891	D5	1	2322	-1.09	-0.036	ribA	b1277	GTP cyclohydrolase II	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Riboflavin"
840	933	-1.11	-0.046	813	589	887	701	0.004137	0.006718	M10	2	2055	-1.62	-0.211	pgpB	b1278	"non-essential phosphatidylglycerophosphate phosphatase, membrane bound"	Fatty acid and phospholipid metabolism	"enzyme; Macromolecule synthesis, modification: Phospholipids"
128	138	-1.00	0.000	111	162	133	137	0.000806	0.001007	C7	1	3098	-1.00	0.000	yciS	b1279	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
433	395	1.00	0.000	424	492	414	458	0.002703	0.003135	E7	1	3099	-1.05	-0.019	yciM	b1280	putative heat shock protein	Putative factors	putative factor; Not classified
627	632	-1.01	-0.004	530	477	629	503	0.002971	0.004769	I22	1	2005	-1.59	-0.201	pyrF	b1281	orotidine-5'-phosphate decarboxylase	Nucleotide biosynthesis and metabolism	enzyme; Pyrimidine ribonucleotide biosynthesis
770	981	-1.27	-0.105	832	650	875	741	0.004371	0.006634	G7	1	3100	-1.52	-0.181	yciH	b1282	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2494	2467	1.01	0.005	2322	2251	2481	2286	0.013491	0.018800	J21	4	1141	-1.39	-0.144	osmB	b1283	osmotically inducible lipoprotein	Cell processes	putative membrane; Osmotic adaptation
602	451	1.20	0.081	910	634	527	772	0.004555	0.003991	C5	3	210	1.14	0.057	b1284	b1284	putative DEOR-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1237	1037	1.19	0.077	1167	1189	1137	1178	0.006950	0.008616	I7	1	3101	-1.24	-0.093	yciR	b1285	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1858	1948	-1.05	-0.021	1418	1468	1903	1443	0.008514	0.014419	J24	4	1533	-1.69	-0.229	rnb	b1286	"RNase II, mRNA degradation"	"Transcription, RNA processing and degradation"	enzyme; Degradation of RNA
1611	1804	-1.12	-0.049	1298	1701	1708	1499	0.008848	0.012940	J9	2	2437	-1.46	-0.165	yciW	b1287	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
899	1765	-1.96	-0.293	2452	2745	1332	2598	0.015332	0.010091	O10	2	2056	1.52	0.182	fabI	b1288	enoyl-[acyl-carrier-protein] reductase (NADH)	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
897	740	1.21	0.084	930	915	819	923	0.005446	0.006206	K7	1	3102	-1.14	-0.057	ycjD	b1289	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1687	1525	1.11	0.044	1612	1422	1606	1517	0.008953	0.012170	A14	4	721	-1.36	-0.133	sapF	b1290	putative ATP-binding protein of peptide transport system	Putative transport proteins	putative transport; Not classified
3959	3689	1.07	0.031	8492	7371	3824	7932	0.046802	0.028976	C14	4	722	1.62	0.208	sapD	b1291	putative ATP-binding protein of peptide transport system	Putative transport proteins	putative transport; Not classified
2829	3193	-1.13	-0.052	6983	7141	3011	7062	0.041672	0.022815	E14	4	723	1.83	0.262	sapC	b1292	homolog of Salmonella peptide transport permease protein	Putative transport proteins	putative transport; Not classified
805	655	1.23	0.089	1334	1284	730	1309	0.007722	0.005532	G14	4	724	1.40	0.145	sapB	b1293	homolog of Salmonella peptide transport permease protein	Putative transport proteins	putative transport; Not classified
3097	3377	-1.09	-0.038	3793	3754	3237	3774	0.022267	0.024531	I14	4	725	-1.10	-0.042	sapA	b1294	homolog of Salmonella peptide transport periplasmic protein	Putative transport proteins	putative transport; Not classified
240	372	-1.00	0.000	162	352	306	257	0.001515	0.002318	M7	1	3103	-1.00	0.000	ymjA	b1295	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3922	3825	1.03	0.011	5838	4691	3873	5265	0.031066	0.029350	L21	2	950	1.06	0.025	ycjJ	b1296	putative amino acid/amine transport protein	Putative transport proteins	putative transport; Not classified
1691	1746	-1.03	-0.014	1372	1353	1718	1362	0.008040	0.013020	L9	2	2438	-1.62	-0.209	b1297	b1297	putative glutamine synthetase (EC 6.3.1.2)	Putative enzymes	putative enzyme; Not classified
2552	1272	2.01	0.302	2901	1567	1912	2234	0.013183	0.014490	N9	2	2439	-1.10	-0.041	ycjL	b1298	probable amidotransferase subunit	Putative enzymes	putative enzyme; Not classified
2441	2931	-1.20	-0.080	2431	2374	2686	2402	0.014176	0.020354	O7	1	3104	-1.44	-0.157	ycjC	b1299	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1852	2125	-1.15	-0.060	1270	1495	1989	1382	0.008156	0.015069	J20	2	1325	-1.85	-0.267	aldH	b1300	"aldehyde dehydrogenase, prefers NADP over NAD"	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
2428	2445	-1.01	-0.003	2120	2212	2436	2166	0.012780	0.018461	P9	2	2440	-1.44	-0.160	ordL	b1301	probable oxidoreductase	Putative enzymes	putative enzyme; Not classified
2785	1430	1.95	0.290	2384	2150	2107	2267	0.013377	0.015968	C10	3	2146	-1.19	-0.077	goaG	b1302	4-aminobutyrate aminotransferase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
269	187	1.00	0.000	257	250	228	254	0.001496	0.001729	O13	4	344	-1.00	0.000	pspF	b1303	psp operon transcriptional activator	Regulatory function	regulator; Phage-related functions and prophages
481	459	1.00	0.000	1323	1408	470	1366	0.008058	0.003560	A15	4	345	2.26	0.355	pspA	b1304	"phage shock protein, inner membrane protein"	"Phage, transposon, or plasmid"	factor; Phage-related functions and prophages
1536	1704	-1.11	-0.045	4927	4856	1620	4892	0.028865	0.012275	C15	4	346	2.35	0.371	pspB	b1305	phage shock protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
98	164	-1.00	0.000	247	374	131	311	0.001834	0.000995	E15	4	347	1.00	0.000	pspC	b1306	phage shock protein: activates phage shock-protein expression	"Phage, transposon, or plasmid"	factor; Phage-related functions and prophages
423	475	-1.00	0.000	788	768	449	778	0.004590	0.003402	G15	4	348	1.35	0.130	pspD	b1307	phage shock protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
1355	906	1.49	0.175	2843	2388	1130	2615	0.015432	0.008566	I15	4	349	1.80	0.256	pspE	b1308	phage shock protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
1995	2201	-1.10	-0.043	1703	1566	2098	1634	0.009645	0.015898	B11	2	2441	-1.65	-0.217	ycjM	b1309	putative polysaccharide hydrolase	Putative enzymes	putative enzyme; Not classified
526	450	1.05	0.022	966	757	488	861	0.005082	0.003697	A9	1	3105	1.37	0.138	b1310	b1310	putative transport periplasmic protein	Putative transport proteins	putative transport; Not classified
278	452	-1.00	0.000	736	462	365	599	0.003535	0.002767	N21	2	951	1.18	0.071	ycjO	b1311	putative binding-protein dependent transport protein	Putative transport proteins	putative transport; Not classified
10690	11079	-1.04	-0.016	13931	13758	10884	13845	0.081693	0.082479	P21	2	952	-1.01	-0.004	ycjP	b1312	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1508	1521	-1.01	-0.004	1821	1557	1514	1689	0.009966	0.011475	D11	2	2442	-1.15	-0.061	ycjQ	b1313	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
1109	938	1.18	0.073	1183	1196	1023	1189	0.007017	0.007754	E5	3	211	-1.10	-0.043	b1314	b1314	putative transient receptor potential locus	Putative factors	putative factor; Not classified
1465	1674	-1.14	-0.058	1311	1810	1570	1561	0.009210	0.011894	F11	2	2443	-1.29	-0.111	ycjS	b1315	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
2085	1978	1.05	0.023	1552	1500	2031	1526	0.009005	0.015393	C9	1	3106	-1.71	-0.233	ycjT	b1316	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
377	246	1.00	0.000	324	264	312	294	0.001735	0.002362	E9	1	3107	-1.00	0.000	ycjU	b1317	putative beta-phosphoglucomutase	Putative enzymes	putative enzyme; Not classified
6146	5871	1.05	0.020	6902	7737	6008	7320	0.043190	0.045531	B23	2	953	-1.05	-0.023	ycjV	b1318	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
513	227	1.03	0.011	321	149	370	235	0.001385	0.002802	G9	1	3108	-1.00	0.000	ompG	b1319	outer membrane protein	Cell structure	membrane; Outer membrane constituents
917	1228	-1.34	-0.127	266	1123	1072	695	0.004099	0.008126	E11	2	139	-1.98	-0.297	ycjW	b1320	putative LACI-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
137	130	1.00	0.000	178	379	134	278	0.001641	0.001013	H11	2	2444	1.00	0.000	ycjX	b1321	putative EC 2.1 enzymes	Putative enzymes	putative enzyme; Not classified
422	302	1.00	0.000	520	472	362	496	0.002928	0.002740	I9	1	3109	1.00	0.000	ycjF	b1322	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1850	1920	-1.04	-0.016	1560	1621	1885	1590	0.009385	0.014281	K14	4	726	-1.52	-0.182	tyrR	b1323	"transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport"	Regulatory function	"regulator; Transport of small molecules: Amino acids, amines"
9177	6114	1.50	0.176	8302	5830	7645	7066	0.041696	0.057935	L21	4	1142	-1.39	-0.143	tpx	b1324	thiol peroxidase	Cell processes	enzyme; Detoxification
922	1024	-1.11	-0.046	878	996	973	937	0.005530	0.007372	J11	2	2445	-1.33	-0.125	ycjG	b1325	putative muconate cycloisomerase I (EC 5.5.-.-)	Putative enzymes	putative enzyme; Not classified
1286	1309	-1.02	-0.008	1412	1285	1297	1349	0.007959	0.009830	L11	2	2446	-1.24	-0.092	ycjI	b1326	putative carboxypeptidase	Putative enzymes	putative enzyme; Not classified
386	265	1.00	0.000	357	464	326	410	0.002422	0.002467	K9	1	3110	-1.00	0.000	b1327	b1327	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
192	18	1.00	0.000	493	410	105	451	0.002664	0.000793	G5	3	212	1.00	0.000	ycjZ	b1328	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
503	521	-1.03	-0.015	595	538	512	566	0.003342	0.003878	M14	4	727	-1.16	-0.065	b1329	b1329	putative transport periplasmic protein	Putative transport proteins	putative transport; Not classified
1655	1625	1.02	0.008	2474	1948	1640	2211	0.013047	0.012424	M9	1	3111	1.05	0.021	b1330	b1330	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8536	8703	-1.02	-0.008	4424	3981	8619	4203	0.024799	0.065316	K15	4	350	-2.63	-0.421	trs5_4	b1331	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
4785	5213	-1.09	-0.037	4854	5097	4999	4976	0.029360	0.037882	O9	1	3112	-1.29	-0.111	ynaJ	b1332	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1015	1059	-1.04	-0.018	383	470	1037	427	0.002517	0.007859	A11	1	3113	-2.62	-0.418	ydaA	b1333	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
814	832	-1.02	-0.009	565	355	823	460	0.002714	0.006235	G11	2	140	-2.08	-0.318	fnr	b1334	"transcriptional regulation of aerobic, anaerobic respiration, osmotic balance"	Regulatory function	regulator; Global regulatory functions
388	292	1.00	0.000	214	306	340	260	0.001534	0.002576	L24	4	1534	-1.00	0.000	ogt	b1335	O-6-alkylguanine-DNA/cysteine-protein methyltransferase	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
477	392	1.00	0.000	737	868	434	802	0.004735	0.003290	D23	2	954	1.44	0.158	ydaH	b1336	putative pump protein (transport)	Putative transport proteins	putative transport; Not classified
447	628	-1.26	-0.099	538	526	537	532	0.003141	0.004071	C11	1	3114	-1.30	-0.113	b1337	b1337	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
407	642	-1.28	-0.108	2021	2435	524	2228	0.013147	0.003973	N11	2	2447	3.31	0.520	ydaJ	b1338	putative aminohydrolase (EC 3.5.1.14)	Putative enzymes	putative enzyme; Not classified
654	641	1.02	0.008	1871	1396	647	1633	0.009639	0.004906	I5	3	213	1.96	0.293	ydaK	b1339	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
370	401	-1.00	0.000	393	287	385	340	0.002007	0.002918	E11	1	3115	-1.00	0.000	ydaL	b1340	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
383	274	1.00	0.000	282	416	329	349	0.002059	0.002492	G11	1	3116	-1.00	0.000	b1341	b1341	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
678	568	1.19	0.077	640	369	623	505	0.002979	0.004720	I11	1	3117	-1.57	-0.197	b1342	b1342	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2317	2276	1.02	0.008	1562	1465	2297	1513	0.008930	0.017403	A23	1	1625	-1.95	-0.290	dbpA	b1343	ATP-dependent RNA helicase	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
1139	1002	1.14	0.056	876	732	1071	804	0.004743	0.008113	K11	1	3118	-1.71	-0.233	ydaO	b1344	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
342	292	1.00	0.000	426	362	317	394	0.002325	0.002402	M15	4	351	-1.00	0.000	b1345	b1345	putative transposase	"Phage, transposon, or plasmid"	putative transport; Not classified
1057	1226	-1.16	-0.064	505	467	1141	486	0.002868	0.008650	M11	1	3119	-2.88	-0.460	ydaQ	b1346	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3239	3138	1.03	0.014	3522	3238	3189	3380	0.019944	0.024162	O11	1	3120	-1.21	-0.083	ydaC	b1347	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3	42	-1.00	0.000	-25	91	22	33	0.000194	0.000169	N24	4	1535	1.00	0.000	lar	b1348	restriction alleviation and modification enhancement	"Phage, transposon, or plasmid"	enzyme; Phage-related functions and prophages
133	66	1.00	0.000	161	238	99	199	0.001175	0.000753	P4	2	1536	1.00	0.000	recT	b1349	"recombinase, DNA renaturation"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
140	273	-1.00	0.000	449	310	206	379	0.002239	0.001563	C23	1	1626	1.00	0.000	recE	b1350	"exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
23	136	-1.00	0.000	83	67	79	75	0.000443	0.000602	O15	4	352	-1.00	0.000	racC	b1351	defective prophage rac; contains recE and oriJ	"Phage, transposon, or plasmid"	membrane; Phage-related functions and prophages
277	376	-1.00	0.000	311	345	327	328	0.001935	0.002476	A13	1	3121	-1.00	0.000	ydaD	b1352	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
408	401	1.00	0.000	791	590	404	690	0.004073	0.003064	A17	4	353	1.33	0.124	sieB	b1353	phage superinfection exclusion protein	"Phage, transposon, or plasmid"	phenotype; Phage-related functions and prophages
257	224	1.00	0.000	116	249	241	182	0.001076	0.001823	C13	1	3122	-1.00	0.000	b1354	b1354	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
320	338	-1.00	0.000	-6	89	329	42	0.000247	0.002493	E13	1	3123	-1.00	0.000	b1355	b1355	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
511	667	-1.30	-0.116	905	611	589	758	0.004472	0.004461	G13	1	3124	1.00	0.001	ydaR	b1356	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
138	108	1.00	0.000	241	124	123	183	0.001078	0.000936	I13	1	3125	1.00	0.000	ydaS	b1357	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
137	70	1.00	0.000	2	135	104	68	0.000403	0.000786	K13	1	3126	-1.00	0.000	ydaT	b1358	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2869	3035	-1.06	-0.025	1139	680	2952	910	0.005368	0.022370	M13	1	3127	-4.17	-0.620	ydaU	b1359	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
10710	10191	1.05	0.022	10541	10298	10450	10420	0.061483	0.079189	B6	2	1537	-1.29	-0.110	b1360	b1360	putative DNA replication factor	Putative factors	putative factor; Not classified
2194	2338	-1.07	-0.028	2829	1816	2266	2322	0.013704	0.017174	O13	1	3128	-1.25	-0.098	ydaW	b1361	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
65	199	-1.00	0.000	227	283	132	255	0.001504	0.001000	C17	4	354	1.00	0.000	b1362	b1362	putative Rac prophage endopeptidase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Not classified"
652	711	-1.09	-0.038	683	955	681	819	0.004831	0.005161	O14	4	728	-1.07	-0.029	trkG	b1363	trk system potassium uptake; part of Rac prophage	Transport and binding proteins	transport; Transport of small molecules: Cations
2347	2654	-1.13	-0.053	3319	2582	2501	2951	0.017410	0.018949	A15	1	3129	-1.09	-0.037	b1364	b1364	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3099	3021	1.03	0.011	1883	1948	3060	1915	0.011301	0.023187	C15	1	3130	-2.05	-0.312	b1365	b1365	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3915	3574	1.10	0.040	2036	2384	3745	2210	0.013040	0.028376	E15	1	3131	-2.18	-0.338	ydaY	b1366	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
194	295	-1.00	0.000	211	176	245	194	0.001143	0.001853	G15	1	3132	-1.00	0.000	b1367	b1367	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
177	142	1.00	0.000	371	471	160	421	0.002483	0.001210	A8	3	601	1.00	0.000	b1368	b1368	putative alpha helix protein	"Hypothetical, unclassified, unknown"	orf; Not classified
1945	1805	1.08	0.032	2889	2694	1875	2791	0.016470	0.014208	I15	1	3133	1.16	0.064	b1369	b1369	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5897	5126	1.15	0.061	3872	3878	5512	3875	0.022866	0.041765	E17	4	355	-1.83	-0.262	trs5_5	b1370	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1003	1124	-1.12	-0.049	427	483	1063	455	0.002686	0.008058	K15	1	3134	-2.69	-0.429	b1371	b1371	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-65	88	-1.00	0.000	101	-16	12	43	0.000252	0.000089	G17	4	356	1.00	0.000	b1372	b1372	putative membrane protein	putative membrane protein	putative membrane; Not classified
1448	1521	-1.05	-0.021	2230	2306	1485	2268	0.013381	0.011251	M15	1	3135	1.19	0.075	ynaC	b1373	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
296	364	-1.00	0.000	325	402	330	364	0.002145	0.002497	I17	4	357	-1.00	0.000	b1374	b1374	putative transposon resolvase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Not classified"
1118	1298	-1.16	-0.065	1566	1333	1208	1450	0.008555	0.009155	O15	1	3136	-1.07	-0.029	ynaE	b1375	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1327	984	1.35	0.130	1453	1233	1155	1343	0.007924	0.008754	C8	3	602	-1.10	-0.043	ynaF	b1376	putative filament protein	Putative cell structure	putative structure; Not classified
1910	1867	1.02	0.010	2295	2256	1889	2276	0.013428	0.014312	E20	1	459	-1.07	-0.028	b1377	b1377	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
7273	7723	-1.06	-0.026	5690	5693	7498	5692	0.033584	0.056817	P11	2	2448	-1.69	-0.228	ydbK	b1378	"putative oxidoreductase, Fe-S subunit"	Putative enzymes	putative enzyme; Not classified
224	333	-1.00	0.000	221	179	279	200	0.001181	0.002112	N21	4	1143	-1.00	0.000	hslJ	b1379	heat shock protein hslJ	Cell processes	"factor; Adaptations, atypical conditions"
2982	2671	1.12	0.048	2641	3521	2827	3081	0.018182	0.021420	L20	2	1326	-1.18	-0.071	ldhA	b1380	"fermentative D-lactate dehydrogenase, NAD-dependent"	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
3570	3423	1.04	0.018	2798	3403	3496	3101	0.018295	0.026494	A17	1	3137	-1.45	-0.161	ydbH	b1381	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
338	251	1.00	0.000	212	314	295	263	0.001551	0.002233	C17	1	3138	-1.00	0.000	ynbE	b1382	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
737	649	1.14	0.055	681	674	693	677	0.003997	0.005250	E17	1	3139	-1.31	-0.118	ydbL	b1383	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
450	469	-1.00	0.000	801	935	459	868	0.005120	0.003482	K5	3	214	1.47	0.167	feaR	b1384	regulatory protein for 2-phenylethylamine catabolism	Regulatory function	regulator; Not classified
775	808	-1.04	-0.018	748	624	791	686	0.004048	0.005995	B13	2	2449	-1.48	-0.171	feaB	b1385	phenylacetaldehyde dehydrogenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
23683	22505	1.05	0.022	16509	17946	23094	17228	0.101655	0.175002	C17	4	1890	-1.72	-0.236	tynA	b1386	copper amine oxidase (tyramine oxidase)	Central intermediary metabolism	enzyme; Degradation of small molecules: Amines
1178	1136	1.04	0.016	1396	1333	1157	1364	0.008051	0.008766	G17	1	3140	-1.09	-0.037	maoC	b1387	putative aldehyde dehydrogenase	Putative enzymes	putative enzyme; Not classified
934	951	-1.02	-0.008	1035	1004	942	1020	0.006016	0.007142	I17	1	3141	-1.19	-0.075	ydbO	b1388	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
513	447	1.03	0.011	503	547	480	525	0.003098	0.003639	K17	1	3142	-1.17	-0.070	ynbF	b1389	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1711	1847	-1.08	-0.033	1288	1168	1779	1228	0.007247	0.013479	M17	1	3143	-1.86	-0.269	ydbP	b1390	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1094	929	1.18	0.071	1438	1674	1012	1556	0.009183	0.007667	O17	1	3144	1.20	0.078	b1391	b1391	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1183	1730	-1.46	-0.165	962	1664	1456	1313	0.007747	0.011037	N20	2	1327	-1.42	-0.154	b1392	b1392	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
247	338	-1.00	0.000	289	306	292	298	0.001757	0.002216	D13	2	2450	-1.00	0.000	ydbS	b1393	putative enzyme	Putative enzymes	putative enzyme; Not classified
441	554	-1.11	-0.044	553	469	497	511	0.003016	0.003768	F13	2	2451	-1.25	-0.097	b1394	b1394	putative enzyme	Putative enzymes	putative enzyme; Not classified
356	510	-1.02	-0.009	267	620	433	444	0.002619	0.003282	A12	2	2057	-1.09	-0.039	ydbU	b1395	putative enzyme	Putative enzymes	putative enzyme; Not classified
910	795	1.14	0.059	1343	983	853	1163	0.006864	0.006461	A19	1	3145	1.06	0.026	b1396	b1396	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
231	326	-1.00	0.000	353	429	278	391	0.002307	0.002110	C12	2	2058	1.00	0.000	b1397	b1397	putative acyltransferase	Putative enzymes	putative enzyme; Not classified
669	574	1.17	0.067	494	539	621	516	0.003046	0.004708	C19	1	3146	-1.55	-0.189	b1398	b1398	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
206	111	1.00	0.000	286	151	159	219	0.001291	0.001202	E19	1	3147	1.00	0.000	b1399	b1399	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1460	1331	1.10	0.040	1409	1211	1395	1310	0.007732	0.010572	G19	1	3148	-1.37	-0.136	b1400	b1400	putative transferase	Putative enzymes	putative enzyme; Not classified
60	7	1.00	0.000	48	64	33	56	0.000331	0.000254	I19	1	3149	1.00	0.000	ydbA_1	b1401	split orf	"Hypothetical, unclassified, unknown"	orf; Unknown function
4395	4450	-1.01	-0.005	3759	3482	4422	3620	0.021363	0.033510	K19	1	3150	-1.57	-0.196	yi22_2	b1402	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
19088	18830	1.01	0.006	27904	25050	18959	26477	0.156234	0.143667	M19	1	3151	1.09	0.036	yi21_2	b1403	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1167	856	1.36	0.135	1688	1577	1012	1632	0.009632	0.007666	K17	4	358	1.26	0.099	tra8_2	b1404	IS30 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1331	1078	1.24	0.092	1341	882	1204	1111	0.006558	0.009126	O19	1	3152	-1.39	-0.144	ydbA_2	b1405	split orf	"Hypothetical, unclassified, unknown"	orf; Unknown function
479	469	1.00	0.000	404	462	474	433	0.002554	0.003591	H13	2	2452	-1.20	-0.078	ydbC	b1406	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
1009	946	1.07	0.028	930	760	977	845	0.004985	0.007405	A21	1	3153	-1.49	-0.172	ydbD	b1407	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
316	285	1.00	0.000	322	331	301	327	0.001929	0.002278	J13	2	2453	-1.00	0.000	b1408	b1408	probable enzyme	Putative enzymes	putative enzyme; Not classified
-229	96	-1.00	0.000	-88	313	-67	113	0.000664	-0.000504	E12	2	2059	1.00	0.000	b1409	b1409	putative phosphatidate cytidiltransferase	Putative enzymes	putative enzyme; Central intermediary metabolism: Nucleotide interconversions
872	869	1.00	0.002	1059	857	871	958	0.005653	0.006599	C21	1	3154	-1.17	-0.067	b1410	b1410	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1293	1384	-1.07	-0.030	2181	1779	1338	1980	0.011682	0.010140	L13	2	2454	1.15	0.061	ynbD	b1411	putative enzymes	Putative enzymes	putative enzyme; Not classified
343	449	-1.00	0.000	365	364	396	365	0.002153	0.003003	G12	2	2060	-1.00	0.000	acpD	b1412	acyl carrier protein phosphodiesterase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
252	269	-1.00	0.000	212	83	260	147	0.000868	0.001971	E23	1	1627	-1.00	0.000	hrpA	b1413	"helicase, ATP-dependent"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
681	624	1.09	0.038	772	710	653	741	0.004371	0.004945	E21	1	3155	-1.13	-0.054	ydcF	b1414	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2721	3007	-1.10	-0.043	1096	1542	2864	1319	0.007783	0.021703	P20	2	1328	-2.79	-0.445	aldA	b1415	"aldehyde dehydrogenase, NAD-linked"	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
292	416	-1.00	0.000	645	797	354	721	0.004252	0.002682	B22	2	1329	1.42	0.151	gapC_2	b1416	glyceraldehyde-3-phosphate dehydrogenase (second fragment)	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
365	699	-1.40	-0.146	790	1503	532	1147	0.006766	0.004033	D22	2	1330	1.68	0.225	gapC_1	b1417	"glyceraldehyde 3-phosphate dehydrogenase C, interrupted"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
839	1018	-1.21	-0.084	853	1211	928	1032	0.006089	0.007035	F22	2	1331	-1.16	-0.063	cybB	b1418	cytochrome b(561)	Energy metabolism	"enzyme; Energy metabolism, carbon: Electron transport"
662	604	1.10	0.040	405	139	633	272	0.001605	0.004797	G21	1	3156	-1.60	-0.204	ydcA	b1419	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
634	331	1.27	0.103	656	452	483	554	0.003267	0.003658	I21	1	3157	-1.12	-0.049	b1420	b1420	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
414	671	-1.34	-0.128	435	533	543	484	0.002855	0.004112	P21	4	1144	-1.37	-0.137	trg	b1421	"methyl-accepting chemotaxis protein III, ribose sensor receptor"	Regulatory function	regulator; Chemotaxis and mobility
706	1011	-1.43	-0.156	1328	932	858	1130	0.006668	0.006504	M5	3	215	1.03	0.011	b1422	b1422	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
1228	1031	1.19	0.076	994	833	1130	914	0.005392	0.008559	K21	1	3158	-1.59	-0.201	b1423	b1423	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
508	966	-1.90	-0.279	1225	1085	737	1155	0.006814	0.005585	G20	1	460	1.22	0.086	ydcG	b1424	putative glycoprotein	Putative cell structure	putative structure; Not classified
1340	1366	-1.02	-0.008	1280	1506	1353	1393	0.008219	0.010255	M21	1	3159	-1.25	-0.096	b1425	b1425	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
9302	7306	1.27	0.105	14273	13887	8304	14080	0.083083	0.062925	O21	1	3160	1.32	0.121	ydcH	b1426	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
246	733	-1.47	-0.166	376	630	490	503	0.002970	0.003710	O19	2	1712	-1.24	-0.092	rimL	b1427	acetylation of N-terminal serine of 30S ribosomal subunit protein L7; acetyl transferase	"Translation, post-translational modification"	enzyme; Ribosomes - maturation and modification
1145	1040	1.10	0.042	1462	1065	1092	1264	0.007456	0.008278	A23	1	3161	-1.11	-0.045	b1428	b1428	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
858	741	1.16	0.064	892	677	800	785	0.004631	0.006060	B23	4	1145	-1.31	-0.117	tehA	b1429	tellurite resistance	Cell processes	transport; Drug/analog sensitivity
1076	1013	1.06	0.026	1097	1279	1044	1188	0.007009	0.007913	D23	4	1146	-1.13	-0.053	tehB	b1430	tellurite resistance	Putative transport proteins	putative transport; Drug/analog sensitivity
1055	954	1.11	0.044	1507	1608	1004	1557	0.009190	0.007611	C23	1	3162	1.21	0.082	b1431	b1431	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2853	2688	1.06	0.026	3576	3283	2770	3430	0.020238	0.020993	E23	1	3163	-1.04	-0.016	b1432	b1432	putative virulence protein	Putative factors	putative factor; Not classified
656	589	1.11	0.047	692	878	622	785	0.004632	0.004717	I20	1	461	-1.02	-0.008	b1433	b1433	putative membrane transport protein	Putative transport proteins	putative transport; Not classified
1098	1182	-1.08	-0.032	637	603	1140	620	0.003658	0.008640	G23	1	3164	-2.36	-0.373	ydcN	b1434	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
945	906	1.04	0.018	766	1007	925	887	0.005231	0.007012	N13	2	2455	-1.34	-0.127	ydcP	b1435	putative collagenase	Putative enzymes	putative enzyme; Not classified
2726	2454	1.11	0.046	4883	4591	2590	4737	0.027953	0.019624	I23	1	3165	1.42	0.154	b1436	b1436	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1295	1238	1.05	0.020	1522	1194	1267	1358	0.008013	0.009599	K23	1	3166	-1.20	-0.078	b1437	b1437	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1	9	-1.00	0.000	42	29	5	35	0.000207	0.000035	M23	1	3167	1.00	0.000	b1438	b1438	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
814	926	-1.14	-0.056	1169	1165	870	1167	0.006888	0.006592	O5	3	216	1.04	0.019	b1439	b1439	multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system	Putative regulatory proteins	putative regulator; Not classified
623	639	-1.03	-0.011	540	975	631	758	0.004472	0.004783	F23	2	955	-1.07	-0.029	b1440	b1440	putative transport protein	Putative transport proteins	putative transport; Not classified
935	1526	-1.63	-0.213	2729	2629	1231	2679	0.015807	0.009325	H23	2	956	1.70	0.229	b1441	b1441	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
1460	1685	-1.15	-0.062	2319	2924	1572	2621	0.015467	0.011915	J23	2	957	1.30	0.113	b1442	b1442	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
4447	4111	1.08	0.034	7600	7180	4279	7390	0.043606	0.032425	L23	2	958	1.34	0.129	b1443	b1443	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
671	817	-1.22	-0.086	540	779	744	660	0.003892	0.005638	P13	2	2456	-1.45	-0.161	b1444	b1444	putative aldehyde dehydrogenase	Putative enzymes	putative enzyme; Not classified
2226	2065	1.08	0.033	3355	3062	2145	3209	0.018932	0.016256	O23	1	3168	1.16	0.066	b1445	b1445	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1721	1319	1.30	0.116	1815	1780	1520	1797	0.010606	0.011518	D10	2	3169	-1.09	-0.036	b1446	b1446	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
540	499	1.08	0.034	693	1130	520	911	0.005376	0.003937	C1	2	3170	1.37	0.135	b1447	b1447	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2881	3083	-1.07	-0.029	4192	3283	2982	3737	0.022053	0.022595	F23	4	1147	-1.02	-0.011	b1448	b1448	putative resistance protein	Putative transport proteins	putative transport; Drug/analog sensitivity
1412	1580	-1.12	-0.049	1019	1886	1496	1453	0.008572	0.011336	B15	2	2457	-1.32	-0.121	yncB	b1449	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
277	393	-1.00	0.000	250	512	335	381	0.002246	0.002538	E1	2	3171	-1.00	0.000	b1450	b1450	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4410	4660	-1.06	-0.024	1647	2194	4535	1921	0.011333	0.034365	N23	2	959	-3.03	-0.482	b1451	b1451	putative outer membrane receptor for iron transport	Putative transport proteins	putative transport; Not classified
3979	4972	-1.25	-0.097	4616	3729	4476	4172	0.024620	0.033915	P23	2	960	-1.38	-0.139	b1452	b1452	putative receptor	Putative factors	putative factor; Not classified
245	325	-1.00	0.000	585	746	285	666	0.003928	0.002158	A16	4	729	1.31	0.117	ansP	b1453	L-asparagine permease	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
600	664	-1.11	-0.044	286	604	632	445	0.002626	0.004791	D15	2	2458	-1.60	-0.203	b1454	b1454	putative transferase	Putative enzymes	putative enzyme; Not classified
320	362	-1.00	0.000	492	608	341	550	0.003246	0.002585	G1	2	3172	1.08	0.034	b1455	b1455	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
488	923	-1.85	-0.266	9	661	705	335	0.001976	0.005346	I1	2	3173	-1.78	-0.251	rhsE	b1456	rhsE protein in rhs element	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
232	349	-1.00	0.000	252	370	291	311	0.001835	0.002203	K1	2	3174	-1.00	0.000	ydcD	b1457	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
535	401	1.07	0.029	803	600	468	701	0.004138	0.003545	M1	2	3175	1.17	0.067	b1458	b1458	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
502	644	-1.28	-0.108	1812	1951	573	1882	0.011102	0.004339	O1	2	3176	2.56	0.408	b1459	b1459	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
22026	21028	1.05	0.020	47145	44643	21527	45894	0.270806	0.163126	B1	3	961	1.66	0.220	ydcC	b1460	putative receptor	Putative factors	putative factor; Not classified
430	592	-1.18	-0.074	355	550	511	453	0.002673	0.003874	A3	2	3177	-1.29	-0.111	ydcE	b1461	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
443	585	-1.17	-0.068	682	614	514	648	0.003825	0.003896	C3	2	3178	-1.02	-0.008	b1462	b1462	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
91	352	-1.00	0.000	430	708	222	569	0.003358	0.001680	F15	2	2459	1.12	0.049	b1463	b1463	putative N-hydroxyarylamine O-acetyltransferase	Putative enzymes	putative enzyme; Not classified
495	407	1.00	0.000	450	553	451	501	0.002959	0.003419	E3	2	3179	-1.14	-0.057	yddE	b1464	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1248	1062	1.18	0.070	726	544	1155	635	0.003746	0.008754	H22	2	1332	-2.34	-0.369	narV	b1465	"cryptic nitrate reductase 2, gamma subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
7131	7579	-1.06	-0.026	8756	9731	7355	9243	0.054543	0.055732	J22	2	1333	-1.02	-0.009	narW	b1466	"cryptic nitrate reductase 2, delta subunit, assembly function"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
12184	12055	1.01	0.005	13365	14205	12120	13785	0.081342	0.091841	L22	2	1334	-1.13	-0.053	narY	b1467	"cryptic nitrate reductase 2, beta subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
1460	2712	-1.86	-0.269	1359	1758	2086	1558	0.009195	0.015807	N22	2	1335	-1.72	-0.235	narZ	b1468	"cryptic nitrate reductase 2, alpha subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
1082	1614	-1.49	-0.174	1024	1516	1348	1270	0.007492	0.010215	P22	2	1336	-1.36	-0.135	narU	b1469	nitrite extrusion protein 2	Transport and binding proteins	transport; Transport of small molecules: Anions
-110	263	-1.00	0.000	-143	211	76	34	0.000202	0.000577	G3	2	3180	-1.00	0.000	b1470	b1470	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
346	272	1.00	0.000	182	377	309	280	0.001650	0.002343	K20	1	462	-1.00	0.000	b1471	b1471	putative glycoportein	Putative cell structure	putative structure; Not classified
318	368	-1.00	0.000	634	323	343	479	0.002826	0.002598	K2	3	582	1.00	0.000	b1472	b1472	putative outer membrane porin protein	putative membrane protein	putative membrane; Not classified
1020	1187	-1.16	-0.066	2105	2286	1104	2196	0.012957	0.008363	I3	2	3181	1.55	0.190	yddG	b1473	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
214	200	1.00	0.000	-22	226	207	102	0.000603	0.001569	B24	2	1337	-1.00	0.000	fdnG	b1474	"formate dehydrogenase-N, nitrate-inducible, alpha subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
4306	4511	-1.05	-0.020	8232	8959	4408	8595	0.050719	0.033406	D24	2	1338	1.52	0.181	fdnH	b1475	"formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
999	1278	-1.28	-0.107	1398	1666	1139	1532	0.009041	0.008628	F24	2	1339	1.05	0.020	fdnI	b1476	"formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
108	446	-1.00	0.000	74	817	277	446	0.002631	0.002096	K3	2	3182	1.00	0.000	yddM	b1477	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
606	772	-1.28	-0.106	494	956	689	725	0.004277	0.005221	H15	2	2460	-1.22	-0.087	adhP	b1478	alcohol dehydrogenase	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
3256	2872	1.13	0.055	2436	480	3064	1458	0.008603	0.023216	E10	3	2147	-2.70	-0.431	sfcA	b1479	NAD-linked malate dehydrogenase (malic enzyme)	Central intermediary metabolism	enzyme; Central intermediary metabolism: Gluconeogenesis
15160	16784	-1.11	-0.044	36414	28564	15972	32489	0.191707	0.121034	A21	2	1713	1.58	0.200	rpsV	b1480	30S ribosomal subunit protein S22	Putative cell structure	putative structure; Not classified
767	807	-1.05	-0.022	1150	1116	787	1133	0.006686	0.005966	M3	2	3183	1.12	0.049	b1481	b1481	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1676	1766	-1.05	-0.023	8762	7512	1721	8137	0.048014	0.013041	H23	4	1148	3.68	0.566	osmC	b1482	osmotically inducible protein	Cell processes	phenotype; Osmotic adaptation
9563	8544	1.12	0.049	18570	19064	9053	18817	0.111032	0.068604	C16	4	730	1.62	0.209	b1483	b1483	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
15280	14780	1.03	0.014	9879	9904	15030	9892	0.058367	0.113893	E16	4	731	-1.95	-0.290	b1484	b1484	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
5121	7294	-1.42	-0.154	12503	12105	6207	12304	0.072602	0.047037	G16	4	732	1.54	0.189	b1485	b1485	putative transport protein	Putative transport proteins	putative transport; Not classified
933	1217	-1.30	-0.115	3534	3381	1075	3458	0.020402	0.008144	I16	4	733	2.51	0.399	b1486	b1486	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
2434	2462	-1.01	-0.005	4250	4377	2448	4314	0.025453	0.018548	D1	3	962	1.37	0.137	b1487	b1487	putative hemin-binding lipoprotein	Putative factors	putative factor; Not classified
470	396	1.00	0.000	737	1106	433	922	0.005438	0.003280	O3	2	3184	1.66	0.220	b1488	b1488	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
265	332	-1.00	0.000	326	501	299	413	0.002439	0.002263	A5	2	3185	1.00	0.000	b1489	b1489	putative enzyme	Putative enzymes	putative enzyme; Not classified
1252	1345	-1.07	-0.031	1424	1695	1299	1559	0.009201	0.009841	C5	2	3186	-1.07	-0.029	b1490	b1490	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1231	1112	1.11	0.044	1150	1486	1172	1318	0.007777	0.008878	E5	2	3187	-1.14	-0.058	b1491	b1491	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2921	2986	-1.02	-0.010	5721	5592	2953	5656	0.033376	0.022380	L11	4	2638	1.49	0.174	xasA	b1492	"acid sensitivity protein, putative transporter"	Putative factors	putative transport; Not classified
3398	2085	1.63	0.212	17393	14554	2741	15973	0.094254	0.020773	G10	3	2148	4.54	0.657	gadB	b1493	glutamate decarboxylase isozyme	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
10589	11679	-1.10	-0.043	5170	5037	11134	5103	0.030114	0.084369	G5	2	3188	-2.80	-0.447	pqqL	b1494	putative peptidase	Putative enzymes	putative enzyme; Not classified
283	454	-1.00	0.000	583	842	368	712	0.004203	0.002790	I5	2	3189	1.40	0.146	yddB	b1495	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2176	2353	-1.08	-0.034	4349	4326	2264	4337	0.025594	0.017159	F1	3	963	1.49	0.174	yddA	b1496	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
140	61	1.00	0.000	240	30	101	135	0.000798	0.000762	A7	3	217	1.00	0.000	b1497	b1497	putative enzyme	Putative enzymes	putative enzyme; Not classified
1226	1268	-1.03	-0.015	1063	1498	1247	1280	0.007555	0.009448	J15	2	2461	-1.25	-0.097	b1498	b1498	putative sulfatase	Putative enzymes	putative enzyme; Not classified
89	153	-1.00	0.000	118	222	121	170	0.001004	0.000917	K5	2	3190	1.00	0.000	b1499	b1499	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
594	331	1.19	0.075	363	1002	463	682	0.004025	0.003506	M5	2	3191	1.15	0.060	b1500	b1500	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2029	1652	1.23	0.089	1969	1652	1841	1811	0.010683	0.013948	L15	2	2462	-1.31	-0.116	b1501	b1501	"putative oxidoreductase, major subunit"	Putative enzymes	putative enzyme; Not classified
259	204	1.00	0.000	410	269	232	339	0.002002	0.001756	M20	1	463	1.00	0.000	b1502	b1502	putative adhesin; similar to FimH protein	Putative cell structure	putative structure; Not classified
151	303	-1.00	0.000	47	242	227	144	0.000852	0.001719	O5	2	3192	-1.00	0.000	b1503	b1503	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
365	497	-1.00	0.000	493	735	431	614	0.003623	0.003268	A7	2	3193	1.11	0.045	b1504	b1504	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
175	187	-1.00	0.000	300	194	181	247	0.001456	0.001373	E8	3	603	1.00	0.000	b1505	b1505	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
67	133	-1.00	0.000	131	109	100	120	0.000708	0.000759	C7	2	3194	-1.00	0.000	b1506	b1506	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1634	1356	1.21	0.081	1469	1270	1495	1370	0.008082	0.011331	O20	1	464	-1.40	-0.147	hipA	b1507	"persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator"	Regulatory function	"regulator; Murein sacculus, peptidoglycan"
418	331	1.00	0.000	700	693	375	697	0.004111	0.002840	A22	1	465	1.37	0.137	hipB	b1508	persistence to inhibition of murein or DNA biosynthesis; regulatory protein	Regulatory function	"regulator; Murein sacculus, peptidoglycan"
2977	2808	1.06	0.025	1685	1892	2893	1788	0.010552	0.021921	E7	2	3195	-2.08	-0.318	b1509	b1509	putative ATP-binding component of a transport system and adhesin protein	Putative transport proteins	putative transport; Not classified
386	621	-1.24	-0.094	251	577	504	414	0.002442	0.003816	G7	2	3196	-1.27	-0.104	ydeK	b1510	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
299	587	-1.17	-0.070	395	412	443	404	0.002381	0.003358	I7	2	3197	-1.12	-0.049	ydeV	b1511	putative kinase	Putative enzymes	putative enzyme; Not classified
3530	2822	1.25	0.097	4617	2931	3176	3774	0.022270	0.024067	C7	3	218	-1.08	-0.034	ydeW	b1512	"putative transcriptional regulator, sorC family"	Putative regulatory proteins	putative regulator; Not classified
2443	2342	1.04	0.018	5705	5127	2392	5416	0.031960	0.018127	H1	3	964	1.76	0.246	b1513	b1513	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
9706	8887	1.09	0.038	14473	16821	9296	15647	0.092330	0.070445	J1	3	965	1.31	0.117	ydeY	b1514	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
3773	3329	1.13	0.054	7336	7125	3551	7230	0.042665	0.026909	L1	3	966	1.59	0.200	ydeZ	b1515	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
390	529	-1.06	-0.025	361	500	460	430	0.002540	0.003484	K7	2	3198	-1.16	-0.065	b1516	b1516	putative LACI-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
405	275	1.00	0.000	304	340	340	322	0.001900	0.002574	M7	2	3199	-1.00	0.000	yneB	b1517	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
318	508	-1.02	-0.007	309	290	413	300	0.001768	0.003131	O7	2	3200	-1.04	-0.019	b1518	b1518	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1636	1666	-1.02	-0.008	1054	1404	1651	1229	0.007251	0.012513	A9	2	3201	-1.73	-0.237	b1519	b1519	putative enzyme	Putative enzymes	putative enzyme; Not classified
940	1473	-1.57	-0.195	328	678	1207	503	0.002967	0.009143	C9	2	3202	-3.05	-0.484	b1520	b1520	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
759	651	1.17	0.066	1801	1895	705	1848	0.010905	0.005342	I7	1	29	2.04	0.310	uxaB	b1521	altronate oxidoreductase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
5638	6010	-1.07	-0.028	10444	9795	5824	10119	0.059712	0.044132	E9	2	3203	1.35	0.131	b1522	b1522	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
12698	12954	-1.02	-0.009	7023	6464	12826	6744	0.039792	0.097193	G9	2	3204	-2.44	-0.388	b1523	b1523	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
244	271	-1.00	0.000	270	359	258	315	0.001856	0.001954	N15	2	2463	-1.00	0.000	yneH	b1524	putative glutaminase	Putative enzymes	putative enzyme; Not classified
1569	1421	1.10	0.043	1958	1867	1495	1912	0.011285	0.011330	P15	2	2464	-1.00	-0.002	b1525	b1525	putative aldehyde dehydrogenase	Putative enzymes	putative enzyme; Not classified
4760	3811	1.25	0.097	8843	8394	4285	8618	0.050854	0.032472	E7	3	219	1.57	0.195	yneJ	b1526	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
1044	1010	1.03	0.014	1074	1178	1027	1126	0.006646	0.007780	I9	2	3205	-1.17	-0.068	b1527	b1527	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3925	3432	1.14	0.058	6870	6907	3679	6889	0.040648	0.027875	J23	4	1149	1.46	0.164	ydeA	b1528	putative resistance / regulatory protein	Putative transport proteins	putative transport; Drug/analog sensitivity
53	259	-1.00	0.000	315	302	156	309	0.001822	0.001182	K9	2	3206	1.00	0.000	ydeB	b1529	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
397	525	-1.05	-0.022	467	410	461	438	0.002586	0.003496	L23	4	1150	-1.17	-0.066	marR	b1530	multiple antibiotic resistance protein; repressor of mar operon	Regulatory function	regulator; Drug/analog sensitivity
260	273	-1.00	0.000	39	238	267	139	0.000817	0.002022	N23	4	1151	-1.00	0.000	marA	b1531	multiple antibiotic resistance; transcriptional activator of defense systems	Regulatory function	regulator; Drug/analog sensitivity
79	47	1.00	0.000	85	67	63	76	0.000449	0.000480	P23	4	1152	-1.00	0.000	marB	b1532	multiple antibiotic resistance protein	Putative transport proteins	putative transport; Drug/analog sensitivity
2317	2419	-1.04	-0.019	2706	2819	2368	2763	0.016302	0.017945	M9	2	3207	-1.10	-0.042	ydeD	b1533	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
523	1069	-2.04	-0.310	1719	2071	796	1895	0.011182	0.006032	O9	2	3208	1.85	0.268	ydeF	b1534	putative transport protein	Putative transport proteins	putative transport; Not classified
1012	1772	-1.75	-0.243	884	1532	1392	1208	0.007129	0.010548	A11	2	3209	-1.48	-0.170	ydeH	b1535	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
126	460	-1.00	0.000	450	438	293	444	0.002619	0.002223	C11	2	3210	1.00	0.000	ydeI	b1536	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
817	1029	-1.26	-0.100	494	664	923	579	0.003415	0.006994	E11	2	3211	-2.05	-0.311	ydeJ	b1537	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1412	1897	-1.34	-0.128	2354	2428	1655	2391	0.014109	0.012538	C21	2	1714	1.13	0.051	dcp	b1538	dipeptidyl carboxypeptidase II	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
458	491	-1.00	0.000	208	358	475	283	0.001672	0.003597	B17	2	2465	-1.20	-0.079	ydfG	b1539	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
761	911	-1.20	-0.078	576	791	836	683	0.004031	0.006335	G11	2	3212	-1.57	-0.196	ydfH	b1540	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
67	176	-1.00	0.000	213	221	121	217	0.001281	0.000921	I11	2	3213	1.00	0.000	b1541	b1541	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
563	583	-1.04	-0.016	462	537	573	500	0.002947	0.004342	D17	2	2466	-1.45	-0.161	ydfI	b1542	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
2339	2073	1.13	0.052	4445	3773	2206	4109	0.024247	0.016717	N1	3	967	1.45	0.161	b1543	b1543	putative transport protein	Putative transport proteins	putative transport; Not classified
182	187	-1.00	0.000	132	166	184	149	0.000881	0.001396	K11	2	3214	-1.00	0.000	ydfK	b1544	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
365	373	-1.00	0.000	285	370	369	327	0.001931	0.002798	M11	2	3215	-1.00	0.000	b1545	b1545	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2205	1933	1.14	0.057	2402	2604	2069	2503	0.014770	0.015679	O11	2	3216	-1.06	-0.026	ydfM	b1546	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
855	1172	-1.37	-0.137	282	421	1013	351	0.002072	0.007679	A13	2	3217	-2.56	-0.408	b1547	b1547	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
28695	30333	-1.06	-0.024	31280	33848	29514	32564	0.192151	0.223652	M17	4	359	-1.16	-0.066	nohA	b1548	homolog of Qin prophage packaging protein NU1	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
49	206	-1.00	0.000	21	147	128	84	0.000497	0.000969	C13	2	3218	-1.00	0.000	ydfO	b1549	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
104	251	-1.00	0.000	97	144	178	120	0.000709	0.001345	E13	2	3219	-1.00	0.000	b1550	b1550	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1	53	-1.00	0.000	-114	115	27	1	0.000005	0.000205	G13	2	3220	-1.00	0.000	b1551	b1551	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
174	196	-1.00	0.000	271	353	185	312	0.001839	0.001401	I13	2	3221	1.00	0.000	cspI	b1552	cold shock-like protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
204	88	1.00	0.000	330	360	146	345	0.002036	0.001108	K13	2	3222	1.00	0.000	b1553	b1553	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2418	3146	-1.30	-0.114	3401	3189	2782	3295	0.019440	0.021082	M13	2	3223	-1.08	-0.035	b1554	b1554	putative lysozyme	Putative enzymes	putative enzyme; Not classified
158	180	-1.00	0.000	329	169	169	249	0.001469	0.001278	O13	2	3224	1.00	0.000	b1555	b1555	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
11779	13612	-1.16	-0.063	6390	7106	12696	6748	0.039818	0.096205	A15	2	3225	-2.42	-0.383	b1556	b1556	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
311	236	1.00	0.000	364	505	274	435	0.002565	0.002073	B2	1	1153	1.00	0.000	cspB	b1557	cold shock protein; may affect transcription	Cell processes	"phenotype; Adaptations, atypical conditions"
2321	2169	1.07	0.029	2212	1929	2245	2071	0.012219	0.017011	N11	4	2639	-1.39	-0.144	cspF	b1558	cold shock protein	Putative factors	phenotype; Not classified
517	774	-1.50	-0.175	606	758	645	682	0.004025	0.004890	C15	2	3226	-1.21	-0.085	b1559	b1559	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
175	257	-1.00	0.000	74	429	216	252	0.001484	0.001636	E15	2	3227	-1.00	0.000	b1560	b1560	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
72	80	-1.00	0.000	-20	109	76	44	0.000262	0.000575	G15	2	3228	-1.00	0.000	rem	b1561	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1055	1037	1.02	0.007	1799	1180	1046	1489	0.008789	0.007928	D2	1	1154	1.11	0.045	relF	b1562	polypeptide destructive to membrane potential	Cell processes	factor; Cell killing
2411	2070	1.16	0.066	2207	1258	2240	1733	0.010223	0.016977	I15	2	3229	-1.66	-0.220	relE	b1563	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1531	1639	-1.07	-0.030	8308	8626	1585	8467	0.049961	0.012008	I11	2	141	4.16	0.619	relB	b1564	negative regulator of translation	Regulatory function	regulator; Global regulatory functions
1682	1532	1.10	0.041	1390	1296	1607	1343	0.007923	0.012178	K15	2	3230	-1.54	-0.187	b1565	b1565	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
227	583	-1.17	-0.067	746	553	405	650	0.003833	0.003071	M15	2	3231	1.25	0.096	flxA	b1566	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
698	909	-1.30	-0.114	189	409	803	299	0.001762	0.006088	O15	2	3232	-2.03	-0.307	b1567	b1567	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
278	449	-1.00	0.000	459	390	364	424	0.002503	0.002757	A17	2	3233	-1.00	0.000	b1568	b1568	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
420	239	1.00	0.000	662	571	329	617	0.003639	0.002496	F2	1	1155	1.21	0.084	dicC	b1569	regulator of dicB	Regulatory function	regulator; Cell division
612	695	-1.14	-0.055	939	709	654	824	0.004862	0.004954	H2	1	1156	-1.02	-0.008	dicA	b1570	regulator of dicB	Regulatory function	regulator; Cell division
3997	3730	1.07	0.030	4846	5171	3863	5008	0.029553	0.029276	C17	2	3234	1.01	0.004	ydfA	b1571	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
583	584	-1.00	-0.001	431	526	584	478	0.002823	0.004422	E17	2	3235	-1.47	-0.169	ydfB	b1572	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2	262	-1.00	0.000	9	273	132	141	0.000832	0.001000	G17	2	3236	-1.00	0.000	ydfC	b1573	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
163	75	1.00	0.000	294	304	119	299	0.001764	0.000901	J2	1	1157	1.00	0.000	dicB	b1575	inhibition of cell division	Regulatory function	regulator; Cell division
-21	-11	-1.00	0.000	-187	-29	-16	-108	-0.000639	-0.000120	I17	2	3237	-1.00	0.000	ydfD	b1576	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
348	342	1.00	0.000	277	264	345	270	0.001596	0.002614	K17	2	3238	-1.00	0.000	ydfE	b1577	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1381	1570	-1.14	-0.056	641	860	1476	751	0.004429	0.011182	M17	2	3239	-2.53	-0.402	b1578	b1578	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
389	367	1.00	0.000	184	388	378	286	0.001687	0.002865	O17	4	360	-1.00	0.000	b1579	b1579	putative transposase	Putative enzymes	putative enzyme; Not classified
207	188	1.00	0.000	585	804	198	694	0.004096	0.001499	K11	2	142	1.37	0.135	rspB	b1580	starvation sensing protein	Regulatory function	enzyme; Global regulatory functions
326	504	-1.01	-0.003	527	642	415	585	0.003450	0.003142	M11	2	143	1.10	0.041	rspA	b1581	starvation sensing protein	Cell processes	phenotype; Global regulatory functions
14097	14281	-1.01	-0.006	19931	18689	14189	19310	0.113942	0.107520	O17	2	3240	1.06	0.025	b1582	b1582	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1689	1700	-1.01	-0.003	3036	1946	1695	2491	0.014700	0.012842	A19	2	3241	1.14	0.059	b1583	b1583	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
14214	14384	-1.01	-0.005	16182	16227	14299	16205	0.095620	0.108356	I10	3	2149	-1.13	-0.054	speG	b1584	spermidine N1-acetyltransferase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Polyamine biosynthesis
211	387	-1.00	0.000	432	437	299	435	0.002565	0.002265	C19	2	3242	1.00	0.000	ynfC	b1585	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2124	1765	1.20	0.081	1599	1447	1944	1523	0.008987	0.014735	E19	2	3243	-1.64	-0.215	b1586	b1586	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2339	1895	1.23	0.091	943	1148	2117	1046	0.006171	0.016040	H24	2	1340	-2.60	-0.415	b1587	b1587	"putative oxidoreductase, major subunit"	Putative enzymes	putative enzyme; Not classified
1794	2528	-1.41	-0.149	1667	2345	2161	2006	0.011838	0.016376	J24	2	1341	-1.38	-0.141	b1588	b1588	"putative oxidoreductase, major subunit"	Putative enzymes	putative enzyme; Not classified
2595	2719	-1.05	-0.020	1441	1535	2657	1488	0.008778	0.020136	G19	2	3244	-2.29	-0.361	b1589	b1589	"putative oxidoreductase, Fe-S subunit"	Putative enzymes	putative enzyme; Not classified
306	251	1.00	0.000	125	269	279	197	0.001162	0.002113	L24	2	1342	-1.00	0.000	b1590	b1590	putative DMSO reductase anchor subunit	Putative enzymes	putative enzyme; Degradation of small molecules: Carbon compounds
160	133	1.00	0.000	213	141	146	177	0.001044	0.001110	I19	2	3245	-1.00	0.000	b1591	b1591	putative oxidoreductase component	Putative enzymes	putative enzyme; Not classified
3240	2753	1.18	0.071	3901	3990	2997	3946	0.023281	0.022708	F4	2	968	1.03	0.011	b1592	b1592	putative chloride channel	Putative transport proteins	putative transport; Not classified
21	210	-1.00	0.000	-65	83	115	9	0.000054	0.000875	K19	2	3246	-1.00	0.000	b1593	b1593	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1210	1370	-1.13	-0.054	2961	2681	1290	2821	0.016646	0.009775	K7	1	30	1.70	0.231	mlc	b1594	putative NAGC-like transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
685	654	1.05	0.020	1856	1697	669	1777	0.010484	0.005071	G7	3	220	2.07	0.315	ynfL	b1595	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
827	998	-1.21	-0.082	948	1126	912	1037	0.006118	0.006913	M19	2	3247	-1.13	-0.053	ynfM	b1596	putative transport protein	Putative transport proteins	putative transport; Not classified
734	641	1.15	0.059	599	591	687	595	0.003510	0.005209	P11	4	2640	-1.48	-0.171	asr	b1597	acid shock protein	Cell processes	phenotype; Not classified
1355	1794	-1.32	-0.122	1975	2131	1575	2053	0.012115	0.011933	O19	2	3248	1.02	0.007	b1598	b1598	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
676	802	-1.19	-0.075	667	821	739	744	0.004392	0.005598	A21	2	3249	-1.27	-0.105	b1599	b1599	possible chaperone	Putative factors	putative factor; Not classified
871	423	1.74	0.241	383	198	647	291	0.001715	0.004902	C21	2	3250	-1.63	-0.213	b1600	b1600	possible chaperone	Putative factors	putative factor; Not classified
528	351	1.06	0.024	367	356	440	361	0.002131	0.003332	E21	2	3251	-1.11	-0.046	b1601	b1601	putative transport protein	Putative transport proteins	putative transport; Not classified
2692	1836	1.47	0.166	4304	4073	2264	4188	0.024715	0.017153	K10	3	2150	1.44	0.159	pntB	b1602	"pyridine nucleotide transhydrogenase, beta subunit"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
2115	1748	1.21	0.083	2256	1416	1932	1836	0.010835	0.014638	M10	3	2151	-1.35	-0.131	pntA	b1603	"pyridine nucleotide transhydrogenase, alpha subunit"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
1452	1593	-1.10	-0.040	1269	1486	1522	1378	0.008129	0.011537	G21	2	3252	-1.42	-0.152	b1604	b1604	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6125	5039	1.22	0.085	11542	9525	5582	10533	0.062155	0.042298	E17	4	1891	1.47	0.167	b1605	b1605	putative arginine/ornithine antiporter	Putative transport proteins	putative transport; Not classified
1382	1616	-1.17	-0.068	1495	1414	1499	1455	0.008583	0.011359	I21	2	3253	-1.32	-0.122	ydgB	b1606	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
594	649	-1.09	-0.039	581	469	622	525	0.003098	0.004712	K21	2	3254	-1.52	-0.182	ydgC	b1607	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
630	515	1.23	0.088	911	596	573	754	0.004447	0.004338	I7	3	221	1.03	0.011	rstA	b1608	response transcriptional regulatory protein (RstB sensor)	Regulatory function	regulator; Not classified
531	787	-1.48	-0.171	1076	1497	659	1287	0.007592	0.004993	O11	2	144	1.52	0.182	rstB	b1609	sensor histidine protein kinase (RstA regulator)	Regulatory function	regulator; Global regulatory functions
1711	1664	1.03	0.012	3158	2524	1687	2841	0.016764	0.012787	C1	1	1538	1.31	0.118	tus	b1610	DNA-binding protein; inhibition of replication at Ter sites	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
1722	1657	1.04	0.017	772	999	1690	886	0.005226	0.012803	N24	2	1343	-2.45	-0.389	fumC	b1611	fumarase C= fumarate hydratase Class II; isozyme	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
2610	2666	-1.02	-0.009	2195	1679	2638	1937	0.011429	0.019991	L4	2	1344	-1.75	-0.243	fumA	b1612	fumarase A = fumarate hydratase Class I; aerobic isozyme	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
1363	1293	1.05	0.023	1903	1815	1328	1859	0.010968	0.010062	M7	1	31	1.09	0.037	manA	b1613	mannose-6-phosphate isomerase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
5147	4945	1.04	0.017	7185	6984	5046	7084	0.041803	0.038236	M21	2	3255	1.09	0.039	ydgA	b1614	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
341	266	1.00	0.000	449	519	303	484	0.002856	0.002298	M2	3	583	1.00	0.000	uidC	b1615	membrane-associated protein	Cell structure	membrane; Inner membrane
370	421	-1.00	0.000	403	599	396	501	0.002957	0.002997	K16	4	734	-1.00	0.000	uidB	b1616	glucuronide permease	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
21475	19278	1.11	0.047	35560	34319	20376	34939	0.206167	0.154408	O7	1	32	1.34	0.126	uidA	b1617	beta-D-glucuronidase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
437	357	1.00	0.000	576	813	397	695	0.004099	0.003010	K7	3	222	1.36	0.134	uidR	b1618	repressor for uid operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
17648	18687	-1.06	-0.025	30398	26268	18168	28333	0.167185	0.137669	O10	3	2152	1.21	0.084	hdhA	b1619	"NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
1850	1844	1.00	0.001	3114	2713	1847	2913	0.017191	0.013993	A9	1	33	1.23	0.089	malI	b1620	repressor of malX and Y genes	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
209	577	-1.15	-0.062	309	920	393	614	0.003623	0.002978	M16	4	735	1.21	0.082	malX	b1621	"PTS system, maltose and glucose-specific II ABC"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
638	406	1.28	0.106	1635	1247	522	1441	0.008503	0.003958	C9	1	34	2.15	0.332	malY	b1622	"enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase"	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1224	1105	1.11	0.045	963	883	1165	923	0.005446	0.008826	K22	1	2006	-1.62	-0.210	add	b1623	adenosine deaminase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
210	877	-1.75	-0.244	1059	1228	544	1143	0.006746	0.004119	O21	2	3256	1.64	0.214	b1624	b1624	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
378	277	1.00	0.000	207	335	328	271	0.001598	0.002484	A23	2	3257	-1.00	0.000	b1625	b1625	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
330	449	-1.00	0.000	473	360	389	416	0.002455	0.002951	C23	2	3258	-1.00	0.000	b1626	b1626	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
785	1144	-1.46	-0.164	370	637	965	503	0.002970	0.007310	E23	2	3259	-2.44	-0.387	b1627	b1627	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
136	213	-1.00	0.000	302	392	175	347	0.002049	0.001323	G23	2	3260	1.00	0.000	b1628	b1628	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2615	2675	-1.02	-0.010	2129	2091	2645	2110	0.012453	0.020043	I23	2	3261	-1.61	-0.207	b1629	b1629	putative membrane protein	putative membrane protein	putative membrane; Not classified
1347	1470	-1.09	-0.038	792	754	1408	773	0.004562	0.010670	K23	2	3262	-2.34	-0.369	ydgO	b1630	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
343	394	-1.00	0.000	461	319	369	390	0.002301	0.002794	M23	2	3263	-1.00	0.000	b1631	b1631	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1547	2109	-1.36	-0.135	4784	4444	1828	4614	0.027228	0.013854	O23	2	3264	1.97	0.293	ydgQ	b1632	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
769	833	-1.08	-0.035	543	613	801	578	0.003411	0.006071	G23	1	1628	-1.78	-0.250	nth	b1633	endonuclease III; specific for apurinic and/or apyrimidinic sites	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
4212	4541	-1.08	-0.033	10285	11092	4377	10689	0.063070	0.033166	O16	4	736	1.90	0.279	ydgR	b1634	putative transport protein	Putative transport proteins	putative transport; Not classified
1514	925	1.64	0.214	2417	2068	1220	2242	0.013232	0.009243	F5	1	2323	1.43	0.156	gst	b1635	glutathionine S-transferase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione"
936	1014	-1.08	-0.035	533	866	975	699	0.004127	0.007388	F10	2	3265	-1.79	-0.253	pdxY	b1636	pyridoxal kinase 2 / pyridoxine kinase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridoxine"
520	800	-1.54	-0.188	1749	2174	660	1962	0.011575	0.005001	E21	2	1715	2.31	0.364	tyrS	b1637	tyrosine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
2741	3085	-1.13	-0.051	3679	3675	2913	3677	0.021695	0.022075	H5	1	2324	-1.02	-0.008	pdxH	b1638	pyridoxinephosphate oxidase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridoxine"
1056	763	1.39	0.142	1930	1698	909	1814	0.010703	0.006892	C1	3	3266	1.55	0.191	ydhA	b1639	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
941	1439	-1.53	-0.185	2002	1412	1190	1707	0.010074	0.009016	E1	3	3267	1.12	0.048	b1640	b1640	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1739	962	1.81	0.257	3776	3279	1350	3527	0.020813	0.010232	G1	3	3268	2.03	0.308	slyB	b1641	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
1128	1036	1.09	0.037	913	2055	1082	1484	0.008756	0.008202	I1	3	3269	1.07	0.028	slyA	b1642	transcriptional regulator for cryptic hemolysin	Regulatory function	"regulator; Adaptations, atypical conditions"
258	117	1.00	0.000	540	175	187	357	0.002109	0.001420	K1	3	3270	1.00	0.000	b1643	b1643	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
537	554	-1.03	-0.014	881	647	545	764	0.004508	0.004132	M1	3	3271	1.09	0.038	b1644	b1644	putative membrane protein	putative membrane protein	putative membrane; Not classified
2258	2501	-1.11	-0.044	4866	3534	2380	4200	0.024785	0.018035	O1	3	3272	1.37	0.138	b1645	b1645	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
630	607	1.04	0.016	1421	1313	619	1367	0.008066	0.004687	L2	1	1158	1.72	0.236	sodC	b1646	superoxide dismutase precursor (Cu-Zn)	Cell processes	enzyme; Detoxification
1142	1168	-1.02	-0.010	2169	1693	1155	1931	0.011396	0.008751	A3	3	3273	1.30	0.115	b1647	b1647	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1607	1583	1.02	0.007	1861	1632	1595	1747	0.010307	0.012086	C3	3	3274	-1.17	-0.069	b1648	b1648	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1781	1589	1.12	0.049	3414	2413	1685	2914	0.017193	0.012768	E3	3	3275	1.35	0.129	b1649	b1649	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1689	1670	1.01	0.005	3196	2678	1680	2937	0.017328	0.012727	B2	3	1345	1.36	0.134	nemA	b1650	N-ethylmaleimide reductase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
2802	2638	1.06	0.026	4741	5135	2720	4938	0.029135	0.020610	G3	3	3276	1.41	0.150	gloA	b1651	lactoylglutathione lyase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
1535	1408	1.09	0.038	1470	1357	1471	1413	0.008339	0.011150	E1	1	1539	-1.34	-0.126	rnt	b1652	"RNase T, degrades tRNA"	"Transcription, RNA processing and degradation"	enzyme; Degradation of RNA
995	897	1.11	0.045	2114	2131	946	2122	0.012523	0.007167	G1	1	1540	1.75	0.242	lhr	b1653	member of ATP-dependent helicase superfamily II	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
2027	2561	-1.26	-0.102	4975	4920	2294	4948	0.029195	0.017383	I3	3	3277	1.68	0.225	ydhD	b1654	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
649	768	-1.18	-0.073	979	828	709	904	0.005332	0.005369	K3	3	3278	-1.01	-0.003	ydhO	b1655	putative lipoprotein	putative membrane protein	putative membrane; Not classified
536	370	1.07	0.030	472	602	453	537	0.003171	0.003435	N2	1	1159	-1.08	-0.035	sodB	b1656	"superoxide dismutase, iron"	Cell processes	enzyme; Detoxification
357	416	-1.00	0.000	626	828	387	727	0.004290	0.002931	M3	3	3279	1.43	0.155	b1657	b1657	putative transport protein	Putative transport proteins	putative transport; Not classified
580	537	1.08	0.033	583	589	559	586	0.003459	0.004235	M22	1	2007	-1.22	-0.088	purR	b1658	"transcriptional repressor for pur regulon, glyA, glnB, prsA, speA"	Regulatory function	regulator; Purine ribonucleotide biosynthesis
364	280	1.00	0.000	523	386	322	455	0.002682	0.002438	M7	3	223	1.00	0.000	ydhB	b1659	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
1006	780	1.29	0.111	1873	1877	893	1875	0.011066	0.006767	B3	3	969	1.64	0.214	ydhC	b1660	putative transport protein	Putative transport proteins	putative transport; Not classified
2952	3245	-1.10	-0.041	5720	5901	3099	5810	0.034285	0.023481	I12	2	2061	1.46	0.164	cfa	b1661	cyclopropane fatty acyl phospholipid synthase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
3173	2289	1.39	0.142	5795	4788	2731	5292	0.031226	0.020693	J5	1	2325	1.51	0.179	ribE	b1662	"riboflavin synthase, alpha chain"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Riboflavin"
2674	2663	1.00	0.002	3251	3911	2669	3581	0.021128	0.020222	O3	3	3280	1.04	0.019	ydhE	b1663	putative transport protein	Putative transport proteins	putative transport; Not classified
1554	1263	1.23	0.090	2274	1695	1409	1984	0.011709	0.010676	A5	3	3281	1.10	0.040	b1664	b1664	possible enzyme	Putative enzymes	putative enzyme; Not classified
383	287	1.00	0.000	447	265	335	356	0.002102	0.002538	C5	3	3282	-1.00	0.000	b1667	b1667	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2598	2489	1.04	0.019	3115	2151	2544	2633	0.015537	0.019275	E5	3	3283	-1.24	-0.094	b1668	b1668	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
585	314	1.17	0.068	569	575	450	572	0.003374	0.003406	G5	3	3284	-1.01	-0.004	b1669	b1669	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
628	672	-1.07	-0.029	789	617	650	703	0.004149	0.004926	I5	3	3285	-1.19	-0.074	ydhU	b1670	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
171	74	1.00	0.000	233	254	123	243	0.001436	0.000928	K5	3	3286	1.00	0.000	b1671	b1671	"putative oxidoreductase, Fe-S subunit"	Putative enzymes	putative enzyme; Not classified
1091	839	1.30	0.114	2149	1899	965	2024	0.011941	0.007310	M5	3	3287	1.63	0.213	b1672	b1672	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1886	1997	-1.06	-0.025	2941	2693	1942	2817	0.016622	0.014713	O5	3	3288	1.13	0.053	b1673	b1673	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
730	692	1.05	0.023	690	525	711	608	0.003586	0.005389	A7	3	3289	-1.50	-0.177	b1674	b1674	"putative oxidoreductase, Fe-S subunit"	Putative enzymes	putative enzyme; Not classified
1152	1241	-1.08	-0.032	685	615	1196	650	0.003837	0.009065	C7	3	3290	-2.36	-0.373	b1675	b1675	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3204	3403	-1.06	-0.026	4851	3599	3304	4225	0.024931	0.025036	D2	3	1346	-1.00	-0.002	pykF	b1676	"pyruvate kinase I (formerly F), fructose stimulated"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
813	681	1.19	0.077	16217	14913	747	15565	0.091844	0.005658	C22	1	466	16.23	1.210	lpp	b1677	murein lipoprotein	Cell structure	"membrane; Murein sacculus, peptidoglycan"
1676	1027	1.63	0.213	2967	1256	1352	2112	0.012462	0.010243	E7	3	3291	1.22	0.085	ynhG	b1678	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1032	687	1.50	0.177	2574	1930	860	2252	0.013290	0.006513	G7	3	3292	2.04	0.310	ynhA	b1679	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
679	695	-1.02	-0.010	632	796	687	714	0.004212	0.005207	F17	2	2467	-1.24	-0.092	b1680	b1680	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3386	3863	-1.14	-0.057	6143	6291	3625	6217	0.036685	0.027467	I7	3	3293	1.34	0.126	ynhC	b1681	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
640	788	-1.23	-0.090	1670	1286	714	1478	0.008723	0.005408	K7	3	3294	1.61	0.208	ynhD	b1682	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
1689	1308	1.29	0.111	4156	4115	1498	4136	0.024405	0.011354	M7	3	3295	2.15	0.332	ynhE	b1683	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6047	6086	-1.01	-0.003	8368	9006	6066	8687	0.051260	0.045970	O7	3	3296	1.12	0.047	ydiC	b1684	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5691	5607	1.01	0.006	4595	4769	5649	4682	0.027629	0.042805	A9	3	3297	-1.55	-0.190	b1685	b1685	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1032	848	1.22	0.085	934	714	940	824	0.004863	0.007123	C9	3	3298	-1.46	-0.166	b1686	b1686	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1870	1816	1.03	0.013	2028	1301	1843	1665	0.009823	0.013965	E9	3	3299	-1.42	-0.153	ydiJ	b1687	putative oxidase	Putative enzymes	putative enzyme; Not classified
1458	658	2.21	0.345	1498	1081	1058	1290	0.007611	0.008019	G9	3	3300	-1.05	-0.023	b1688	b1688	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
772	619	1.25	0.096	1270	899	696	1084	0.006397	0.005271	I9	3	3301	1.21	0.084	b1689	b1689	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1568	1202	1.30	0.115	3833	3900	1385	3866	0.022815	0.010498	D3	3	970	2.17	0.337	b1690	b1690	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
837	834	1.00	0.002	1115	1027	835	1071	0.006320	0.006330	F3	3	971	-1.00	-0.001	b1691	b1691	putative amino acid/amine transport protein	Putative transport proteins	putative transport; Not classified
776	928	-1.20	-0.077	1159	847	852	1003	0.005917	0.006458	H17	2	2468	-1.09	-0.038	ydiB	b1692	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
2779	2547	1.09	0.038	3228	4144	2663	3686	0.021751	0.020180	G17	4	1892	1.08	0.033	aroD	b1693	3-dehydroquinate dehydratase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Chorismate
768	708	1.09	0.036	1147	1141	738	1144	0.006749	0.005593	K9	3	3302	1.21	0.082	ydiF	b1694	putative enzyme	Putative enzymes	putative enzyme; Not classified
413	309	1.00	0.000	-33	367	361	167	0.000986	0.002735	J17	2	2469	-1.00	0.000	b1695	b1695	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
634	403	1.27	0.103	544	352	518	448	0.002646	0.003928	M9	3	3303	-1.31	-0.117	b1696	b1696	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
2822	2186	1.29	0.111	4696	4721	2504	4709	0.027786	0.018976	F2	3	1347	1.46	0.166	ydiQ	b1697	putative transport protein	Putative transport proteins	putative transport; Not classified
266	293	-1.00	0.000	425	472	280	448	0.002646	0.002118	H2	3	1348	1.00	0.000	ydiR	b1698	putative flavoprotein	Putative enzymes	putative enzyme; Not classified
768	497	1.54	0.186	2433	2334	632	2383	0.014064	0.004793	O9	3	3304	2.93	0.468	ydiS	b1699	flavoprotein; probably electron transport	Putative enzymes	putative enzyme; Not classified
3392	2936	1.16	0.063	3610	4173	3164	3892	0.022965	0.023977	A11	3	3305	-1.04	-0.019	ydiT	b1700	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
220	185	1.00	0.000	223	126	203	175	0.001032	0.001537	A12	3	2153	-1.00	0.000	ydiD	b1701	putative ligase/synthetase	Putative enzymes	putative enzyme; Not classified
386	329	1.00	0.000	989	701	357	845	0.004986	0.002707	C12	3	2154	1.66	0.221	ppsA	b1702	phosphoenolpyruvate synthase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Gluconeogenesis
914	831	1.10	0.041	853	705	873	779	0.004595	0.006613	C11	3	3306	-1.44	-0.158	ydiA	b1703	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2430	2894	-1.19	-0.076	2908	3778	2662	3343	0.019727	0.020173	I17	4	1893	-1.02	-0.010	aroH	b1704	"3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible)"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Tryptophan
407	435	-1.00	0.000	968	586	421	777	0.004587	0.003189	E11	3	3307	1.44	0.158	ydiE	b1705	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5994	4956	1.21	0.083	6412	6876	5475	6644	0.039205	0.041490	G11	3	3308	-1.06	-0.025	b1706	b1706	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2373	2040	1.16	0.066	2369	1639	2206	2004	0.011827	0.016719	I11	3	3309	-1.41	-0.150	b1707	b1707	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1809	2238	-1.24	-0.092	3473	3982	2024	3727	0.021994	0.015335	O2	3	584	1.43	0.157	nlpC	b1708	lipoprotein	Cell structure	"membrane; Macromolecule synthesis, modification: Lipoprotein"
398	478	-1.00	0.000	782	903	438	843	0.004973	0.003316	A18	4	737	1.50	0.176	btuD	b1709	ATP-binding component of vitamin B12 transport system	Transport and binding proteins	transport; Transport of small molecules: Other
350	625	-1.25	-0.097	1393	1680	487	1537	0.009067	0.003692	C18	4	738	2.46	0.390	btuE	b1710	vitamin B12 transport	Transport and binding proteins	transport; Transport of small molecules: Other
1389	1407	-1.01	-0.005	1128	1481	1398	1305	0.007698	0.010594	E18	4	739	-1.38	-0.139	btuC	b1711	vitamin B12 transport permease protein	Transport and binding proteins	transport; Transport of small molecules: Other
929	1239	-1.33	-0.125	2520	2384	1084	2452	0.014467	0.008212	I1	1	1541	1.76	0.246	himA	b1712	"integration host factor (IHF), alpha subunit; site specific recombination"	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
3610	3660	-1.01	-0.006	13298	12910	3635	13104	0.077323	0.027544	G21	2	1716	2.81	0.448	pheT	b1713	"phenylalanine tRNA synthetase, beta-subunit"	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
1302	1492	-1.15	-0.059	1326	2132	1397	1729	0.010201	0.010587	I21	2	1717	-1.04	-0.016	pheS	b1714	"phenylalanine tRNA synthetase, alpha-subunit"	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
123	183	-1.00	0.000	16	217	153	116	0.000687	0.001160	K21	2	1718	-1.00	0.000	pheM	b1715	phenylalanyl-tRNA synthetase (pheST) operon leader peptide	"Translation, post-translational modification"	"leader; Aminoacyl tRNA synthetases, tRNA modification"
1803	1634	1.10	0.043	5128	6113	1719	5620	0.033164	0.013023	M21	2	1719	2.55	0.406	rplT	b1716	"50S ribosomal subunit protein L20, and regulator"	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
2894	2653	1.09	0.038	13297	13150	2774	13224	0.078028	0.021020	O21	2	1720	3.71	0.570	rpmI	b1717	50S ribosomal subunit protein A	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
18584	18214	1.02	0.009	25706	23347	18399	24526	0.144723	0.139424	A23	2	1721	1.04	0.016	infC	b1718	protein chain initiation factor IF-3	"Translation, post-translational modification"	factor; Proteins - translation and modification
13471	12315	1.09	0.039	21576	19972	12893	20774	0.122581	0.097700	C23	2	1722	1.25	0.099	thrS	b1719	threonine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
850	495	1.70	0.231	768	611	672	689	0.004067	0.005095	K11	3	3310	-1.25	-0.098	b1720	b1720	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1500	1256	1.19	0.077	1720	1396	1378	1558	0.009196	0.010441	M11	3	3311	-1.14	-0.055	b1721	b1721	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
431	253	1.00	0.000	848	899	342	873	0.005154	0.002591	O11	3	3312	1.72	0.235	b1722	b1722	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1991	1580	1.26	0.100	2788	2285	1785	2536	0.014967	0.013528	J2	3	1349	1.11	0.044	pfkB	b1723	6-phosphofructokinase II; suppressor of pfkA	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
1737	1805	-1.04	-0.017	2983	3554	1771	3269	0.019289	0.013422	A13	3	3313	1.44	0.158	b1724	b1724	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1216	867	1.40	0.147	1169	1304	1042	1237	0.007297	0.007895	C13	3	3314	-1.08	-0.034	b1725	b1725	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
437	400	1.00	0.000	437	325	419	381	0.002248	0.003174	E13	3	3315	-1.06	-0.024	b1726	b1726	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1712	1820	-1.06	-0.027	1606	1850	1766	1728	0.010196	0.013383	G13	3	3316	-1.31	-0.118	yniC	b1727	putative phosphatase	Putative enzymes	putative enzyme; Not classified
291	139	1.00	0.000	393	210	215	302	0.001780	0.001628	I13	3	3317	1.00	0.000	b1728	b1728	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1586	1492	1.06	0.027	2491	2408	1539	2449	0.014454	0.011663	H3	3	972	1.24	0.093	b1729	b1729	part of a kinase	Putative enzymes	putative enzyme; Not classified
236	324	-1.00	0.000	401	622	280	511	0.003017	0.002120	K13	3	3318	1.01	0.003	b1730	b1730	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8303	7523	1.10	0.043	5744	4344	7913	5044	0.029764	0.059963	M13	3	3319	-2.01	-0.304	b1731	b1731	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2448	2677	-1.09	-0.039	4351	3590	2562	3971	0.023430	0.019417	P2	1	1160	1.21	0.082	katE	b1732	catalase; hydroperoxidase HPII(III)	Cell processes	enzyme; Detoxification
6582	6638	-1.01	-0.004	14758	13128	6610	13943	0.082274	0.050090	O13	3	3320	1.64	0.216	ydjC	b1733	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
342	388	-1.00	0.000	869	902	365	885	0.005224	0.002765	E9	1	35	1.74	0.241	celF	b1734	phospho-beta-glucosidase; cryptic	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
213	159	1.00	0.000	214	337	186	275	0.001625	0.001407	G9	1	36	1.00	0.000	celD	b1735	negative transcriptional regulator of cel operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
1610	1211	1.33	0.124	3299	3388	1410	3344	0.019729	0.010688	G18	4	740	1.85	0.266	celC	b1736	"PEP-dependent phosphotransferase enzyme III for cellobiose, arbutin, and salicin"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
779	757	1.03	0.013	1724	1713	768	1718	0.010140	0.005821	I18	4	741	1.74	0.241	celB	b1737	"PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
743	910	-1.22	-0.088	883	893	826	888	0.005239	0.006262	K18	4	742	-1.20	-0.078	celA	b1738	"PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1400	1456	-1.04	-0.017	6446	5338	1428	5892	0.034767	0.010822	A13	2	145	3.21	0.507	osmE	b1739	activator of ntrL gene	Regulatory function	regulator; Global regulatory functions
1202	1185	1.01	0.006	1958	1426	1193	1692	0.009982	0.009043	L5	1	2326	1.10	0.043	nadE	b1740	"NAD synthetase, prefers NH3 over glutamine"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide"
5430	5410	1.00	0.002	9150	9384	5420	9267	0.054681	0.041073	A15	3	3321	1.33	0.124	b1741	b1741	putative excinuclease subunit	Putative enzymes	putative enzyme; Not classified
1048	1285	-1.23	-0.088	739	570	1166	654	0.003862	0.008839	C15	3	3322	-2.29	-0.360	b1742	b1742	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
268	229	1.00	0.000	652	413	248	532	0.003139	0.001883	E15	3	3323	1.05	0.020	spy	b1743	periplasmic protein related to spheroblast formation	"Hypothetical, unclassified, unknown"	phenotype; Not classified
694	718	-1.03	-0.015	1028	859	706	943	0.005566	0.005346	G15	3	3324	1.04	0.018	ydjS	b1744	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
59358	54135	1.10	0.040	56927	58184	56747	57556	0.339618	0.430013	I15	3	3325	-1.27	-0.102	b1745	b1745	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
232	290	-1.00	0.000	211	340	261	276	0.001626	0.001978	L17	2	2470	-1.00	0.000	b1746	b1746	putative aldehyde dehydrogenase	Putative enzymes	putative enzyme; Not classified
2969	2833	1.05	0.020	3931	3232	2901	3581	0.021133	0.021982	K15	3	3326	-1.04	-0.017	b1747	b1747	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2035	1824	1.12	0.047	2613	2332	1930	2473	0.014589	0.014621	K17	4	1894	-1.00	-0.001	cstC	b1748	acetylornithine delta-aminotransferase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Arginine
890	894	-1.00	-0.002	1083	1056	892	1069	0.006310	0.006759	I23	1	1629	-1.07	-0.030	xthA	b1749	exonuclease III	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
3499	3391	1.03	0.014	3722	3824	3445	3773	0.022261	0.026105	M15	3	3327	-1.17	-0.069	ydjX	b1750	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
343	213	1.00	0.000	659	763	278	711	0.004198	0.002107	O15	3	3328	1.40	0.146	ydjY	b1751	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6057	5907	1.03	0.011	13222	12080	5982	12651	0.074650	0.045330	A17	3	3329	1.65	0.217	ydjZ	b1752	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
338	232	1.00	0.000	293	427	285	360	0.002124	0.002163	C17	3	3330	-1.00	0.000	ynjA	b1753	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1514	1334	1.13	0.055	1614	1315	1424	1465	0.008643	0.010792	E17	3	3331	-1.25	-0.096	b1754	b1754	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6311	6320	-1.00	-0.001	6835	6406	6315	6620	0.039065	0.047856	G17	3	3332	-1.23	-0.088	b1755	b1755	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1084	834	1.30	0.114	1577	1162	959	1369	0.008078	0.007266	J3	3	973	1.11	0.046	b1756	b1756	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
4316	4513	-1.05	-0.019	6132	6404	4415	6268	0.036988	0.033455	E12	3	2155	1.11	0.044	b1757	b1757	putative thiosulfate sulfur transferase	Putative enzymes	putative enzyme; Central intermediary metabolism: Sulfur metabolism
450	493	-1.00	0.000	612	639	471	626	0.003692	0.003571	L2	3	1350	1.03	0.014	b1758	b1758	putative cytochrome oxidase	Putative enzymes	putative enzyme; Not classified
880	1306	-1.48	-0.171	1492	1782	1093	1637	0.009661	0.008283	G12	3	2156	1.17	0.067	b1759	b1759	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3551	3560	-1.00	-0.001	4781	4097	3555	4439	0.026192	0.026942	I17	3	3333	-1.03	-0.012	b1760	b1760	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3869	3696	1.05	0.020	4835	5420	3782	5127	0.030256	0.028663	M17	4	1895	1.06	0.023	gdhA	b1761	NADP-specific glutamate dehydrogenase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Glutamate
508	525	-1.03	-0.014	821	560	516	691	0.004076	0.003912	K17	3	3334	1.04	0.018	b1762	b1762	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5721	6087	-1.06	-0.027	7243	6958	5904	7101	0.041899	0.044741	K1	1	1542	-1.07	-0.029	topB	b1763	DNA topoisomerase III	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
861	1020	-1.18	-0.073	1061	1415	941	1238	0.007307	0.007127	E23	2	1723	1.03	0.011	selD	b1764	"selenophosphate synthase, H(2)Se added to acrylyl-tRNA"	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
1423	1285	1.11	0.045	1711	1742	1354	1726	0.010187	0.010261	M17	3	3335	-1.01	-0.003	ydjA	b1765	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2204	2263	-1.03	-0.012	1690	1776	2233	1733	0.010228	0.016924	G23	2	1724	-1.65	-0.219	sppA	b1766	"protease IV, a signal peptide peptidase"	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
1721	2206	-1.28	-0.108	3688	3985	1964	3837	0.022639	0.014879	O17	4	1896	1.52	0.182	ansA	b1767	cytoplasmic L-asparaginase I	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
27828	26684	1.04	0.018	37324	34111	27256	35718	0.210760	0.206538	O17	3	3336	1.02	0.009	ydjB	b1768	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1940	1942	-1.00	-0.001	2528	1241	1941	1885	0.011120	0.014708	A19	3	3337	-1.32	-0.121	ydjE	b1769	putative transport protein	Putative transport proteins	putative transport; Not classified
1216	945	1.29	0.110	1373	1398	1081	1386	0.008178	0.008188	O7	3	224	-1.00	-0.001	b1770	b1770	putative DEOR-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1816	1714	1.06	0.025	4669	4821	1765	4745	0.027998	0.013375	C19	3	3338	2.09	0.321	b1771	b1771	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
349	207	1.00	0.000	336	173	278	255	0.001503	0.002108	I9	1	37	-1.00	0.000	b1772	b1772	putative kinase	Putative enzymes	putative enzyme; Not classified
1499	1013	1.48	0.170	1724	2257	1256	1991	0.011746	0.009518	N2	3	1351	1.23	0.091	b1773	b1773	putative aldolase	Putative enzymes	putative enzyme; Not classified
323	379	-1.00	0.000	478	513	351	495	0.002922	0.002659	N17	2	2471	1.00	0.000	ydjJ	b1774	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
122	216	-1.00	0.000	415	216	169	315	0.001861	0.001281	E19	3	3339	1.00	0.000	b1775	b1775	putative transport protein	Putative transport proteins	putative transport; Not classified
7767	7416	1.05	0.020	14399	14626	7592	14512	0.085633	0.057527	P17	2	2472	1.49	0.173	b1776	b1776	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
788	949	-1.21	-0.081	1122	814	868	968	0.005711	0.006581	G19	3	3340	-1.15	-0.062	b1777	b1777	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1587	1445	1.10	0.041	2061	1813	1516	1937	0.011431	0.011491	I19	3	3341	-1.01	-0.002	yeaA	b1778	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7741	8427	-1.09	-0.037	16220	12517	8084	14369	0.084785	0.061258	P2	3	1352	1.38	0.141	gapA	b1779	glyceraldehyde-3-phosphate dehydrogenase A	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
871	819	1.06	0.027	1418	1306	845	1362	0.008038	0.006402	K19	3	3342	1.26	0.099	yeaD	b1780	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
202	704	-1.41	-0.149	222	487	453	354	0.002090	0.003431	B19	2	2473	-1.14	-0.058	b1781	b1781	putative an aldehyde reductase	Putative enzymes	putative enzyme; Not classified
1456	1271	1.15	0.059	1706	1572	1364	1639	0.009671	0.010335	M19	3	3343	-1.07	-0.029	yeaF	b1782	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6503	6612	-1.02	-0.007	8873	8210	6558	8542	0.050401	0.049692	O19	3	3344	1.01	0.006	yeaG	b1783	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4112	3876	1.06	0.026	5914	4806	3994	5360	0.031628	0.030263	A21	3	3345	1.05	0.019	yeaH	b1784	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2308	2391	-1.04	-0.015	2857	2419	2350	2638	0.015567	0.017807	C21	3	3346	-1.14	-0.058	yeaI	b1785	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1303	964	1.35	0.131	977	702	1133	839	0.004953	0.008589	E21	3	3347	-1.73	-0.239	yeaJ	b1786	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1134	951	1.19	0.077	965	665	1043	815	0.004811	0.007900	G21	3	3348	-1.64	-0.215	yeaK	b1787	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
76	216	-1.00	0.000	194	91	146	143	0.000843	0.001108	I21	3	3349	-1.00	0.000	b1788	b1788	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
584	463	1.17	0.068	471	456	523	464	0.002735	0.003967	K21	3	3350	-1.32	-0.121	yeaL	b1789	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3496	2659	1.31	0.119	4497	3971	3078	4234	0.024982	0.023322	M21	3	3351	1.07	0.030	yeaM	b1790	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
6188	5712	1.08	0.035	5888	5093	5950	5491	0.032398	0.045086	O21	3	3352	-1.39	-0.144	yeaN	b1791	putative amino acid/amine transport protein	Putative transport proteins	putative transport; Not classified
895	852	1.05	0.022	1125	866	874	995	0.005873	0.006622	A23	3	3353	-1.13	-0.052	yeaO	b1792	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2497	2258	1.11	0.044	2020	1568	2378	1794	0.010586	0.018018	C23	3	3354	-1.70	-0.231	yoaF	b1793	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1724	1742	-1.01	-0.004	1633	1739	1733	1686	0.009948	0.013132	E23	3	3355	-1.32	-0.121	yeaP	b1794	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4527	4106	1.10	0.042	6436	4992	4317	5714	0.033715	0.032711	G23	3	3356	1.03	0.013	yeaQ	b1795	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
515	332	1.03	0.013	191	38	424	114	0.000675	0.003209	I23	3	3357	-1.07	-0.029	yoaG	b1796	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2278	2226	1.02	0.010	1858	1518	2252	1688	0.009959	0.017065	K23	3	3358	-1.71	-0.234	yeaR	b1797	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1667	1172	1.42	0.153	2612	1783	1420	2198	0.012968	0.010758	M23	3	3359	1.21	0.081	yeaS	b1798	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
445	235	1.00	0.000	863	842	340	853	0.005031	0.002577	A9	3	225	1.68	0.225	yeaT	b1799	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
2174	1881	1.16	0.063	970	516	2027	743	0.004385	0.015362	A19	4	1897	-3.50	-0.544	yeaU	b1800	putative tartrate dehydrogenase	Putative enzymes	putative enzyme; Not classified
3245	2768	1.17	0.069	2616	3323	3007	2969	0.017522	0.022783	L3	3	974	-1.30	-0.114	yeaV	b1801	putative transport protein	Putative transport proteins	putative transport; Not classified
2667	2801	-1.05	-0.021	5533	4873	2734	5203	0.030701	0.020719	O23	3	3360	1.48	0.171	yeaW	b1802	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
826	1002	-1.21	-0.084	316	835	914	575	0.003395	0.006927	D19	2	2474	-2.04	-0.310	yeaX	b1803	putative diogenase beta subunit	Putative enzymes	putative enzyme; Not classified
396	451	-1.00	0.000	644	468	424	556	0.003280	0.003211	M1	1	1543	1.02	0.009	rnd	b1804	"RNase D, processes tRNA precursor"	"Transcription, RNA processing and degradation"	enzyme; Degradation of RNA
406	729	-1.46	-0.164	378	588	568	483	0.002849	0.004302	K12	2	2062	-1.43	-0.157	fadD	b1805	"acyl-CoA synthetase,  long-chain-fatty-acid--CoA ligase"	Fatty acid and phospholipid metabolism	enzyme; Degradation of small molecules: Fatty acids
297	154	1.00	0.000	402	344	226	373	0.002200	0.001709	H10	2	3361	1.00	0.000	b1806	b1806	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
1708	1785	-1.04	-0.019	3068	4154	1747	3611	0.021308	0.013235	C1	4	3362	1.61	0.207	yeaZ	b1807	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
379	308	1.00	0.000	536	474	343	505	0.002980	0.002602	O1	1	1544	1.00	0.000	b1808	b1808	putative enzyme	Putative enzymes	putative enzyme; Not classified
709	518	1.37	0.136	423	1377	614	900	0.005310	0.004650	E1	4	3363	1.14	0.058	b1809	b1809	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1862	1367	1.36	0.134	2530	2787	1615	2659	0.015688	0.012236	G1	4	3364	1.28	0.108	b1810	b1810	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
208	507	-1.01	-0.006	451	1237	358	844	0.004978	0.002709	I1	4	3365	1.66	0.220	b1811	b1811	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
685	813	-1.19	-0.075	797	585	749	691	0.004076	0.005678	N5	1	2327	-1.39	-0.144	pabB	b1812	"p-aminobenzoate synthetase, component I"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Folic acid"
346	460	-1.00	0.000	846	727	403	786	0.004639	0.003057	K1	4	3366	1.52	0.181	yeaB	b1813	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
612	633	-1.03	-0.015	577	729	622	653	0.003855	0.004714	C19	4	1898	-1.22	-0.087	sdaA	b1814	L-serine deaminase	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
369	111	1.00	0.000	177	207	240	192	0.001134	0.001816	M1	4	3367	-1.00	0.000	b1815	b1815	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5225	6169	-1.18	-0.072	6606	6613	5697	6609	0.039000	0.043171	O1	4	3368	-1.11	-0.044	yoaE	b1816	putative transport protein	Putative transport proteins	putative transport; Not classified
1938	1700	1.14	0.057	2613	3368	1819	2991	0.017648	0.013785	M18	4	743	1.28	0.107	manX	b1817	"PTS enzyme IIAB, mannose-specific"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
827	706	1.17	0.069	2096	2338	767	2217	0.013083	0.005809	O18	4	744	2.25	0.353	manY	b1818	"PTS enzyme IIC, mannose-specific"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
5060	4704	1.08	0.032	14161	12862	4882	13511	0.079726	0.036994	A20	4	745	2.16	0.333	manZ	b1819	"PTS enzyme IID, mannose-specific"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
177	207	-1.00	0.000	143	222	192	183	0.001078	0.001455	A3	4	3369	-1.00	0.000	b1820	b1820	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1441	1471	-1.02	-0.009	2320	2287	1456	2303	0.013592	0.011033	C3	4	3370	1.23	0.091	b1821	b1821	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
500	474	1.00	0.000	342	360	487	351	0.002071	0.003689	E3	4	3371	-1.23	-0.090	yebH	b1822	putative enzyme	Putative enzymes	putative enzyme; Not classified
11488	11254	1.02	0.009	8999	8726	11371	8862	0.052293	0.086165	B13	4	2641	-1.65	-0.217	cspC	b1823	cold shock protein	Cell processes	phenotype; Not classified
2322	2764	-1.19	-0.076	2163	2460	2543	2312	0.013640	0.019270	G3	4	3372	-1.41	-0.150	b1824	b1824	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
584	653	-1.12	-0.049	484	488	619	486	0.002867	0.004688	I3	4	3373	-1.56	-0.194	b1825	b1825	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
133	324	-1.00	0.000	248	340	228	294	0.001733	0.001729	K3	4	3374	1.00	0.000	b1826	b1826	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1045	1199	-1.15	-0.060	2292	2288	1122	2290	0.013511	0.008501	C9	3	226	1.59	0.201	b1827	b1827	putative regulator	Putative regulatory proteins	putative regulator; Not classified
1018	820	1.24	0.094	1965	2102	919	2034	0.012001	0.006965	B4	1	1161	1.72	0.236	b1828	b1828	putative transport protein	Putative transport proteins	putative transport; Not classified
2289	2247	1.02	0.008	3876	3794	2268	3835	0.022630	0.017188	D4	1	1162	1.32	0.119	htpX	b1829	"heat shock protein, integral membrane protein"	Cell processes	"orf; Adaptations, atypical conditions"
32491	33149	-1.02	-0.009	19539	17800	32820	18670	0.110163	0.248701	I23	2	1725	-2.26	-0.354	prc	b1830	carboxy-terminal protease for penicillin-binding protein 3	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
122	205	-1.00	0.000	250	300	164	275	0.001625	0.001239	M3	4	3375	1.00	0.000	yebJ	b1831	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1139	984	1.16	0.064	1273	1762	1062	1518	0.008956	0.008045	O3	4	3376	1.11	0.047	b1832	b1832	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1299	1514	-1.17	-0.067	2914	2796	1406	2855	0.016847	0.010655	A5	4	3377	1.58	0.199	b1833	b1833	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3439	3585	-1.04	-0.018	2388	2797	3512	2592	0.015297	0.026614	C5	4	3378	-1.74	-0.240	b1834	b1834	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
917	558	1.64	0.216	1003	636	738	819	0.004833	0.005589	G8	3	604	-1.16	-0.063	yebU	b1835	putative nucleolar proteins	Putative cell structure	putative structure; Not classified
1520	1875	-1.23	-0.091	3395	2937	1697	3166	0.018684	0.012862	E5	4	3379	1.45	0.162	b1836	b1836	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
339	628	-1.26	-0.099	942	802	483	872	0.005145	0.003662	G5	4	3380	1.41	0.148	b1837	b1837	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
82	197	-1.00	0.000	359	209	139	284	0.001675	0.001055	I5	4	3381	1.00	0.000	pphA	b1838	"protein phosphatase 1 modulates phosphoproteins, signals protein misfolding"	Regulatory function	regulator; Not classified
482	527	-1.05	-0.023	737	761	504	749	0.004420	0.003822	K5	4	3382	1.16	0.063	b1839	b1839	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
753	701	1.07	0.031	1904	1160	727	1532	0.009040	0.005509	F4	1	1163	1.64	0.215	b1840	b1840	putative resistance protein	Putative transport proteins	putative transport; Drug/analog sensitivity
241	226	1.00	0.000	550	642	233	596	0.003516	0.001769	M5	4	3383	1.17	0.069	b1841	b1841	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2544	2264	1.12	0.051	1679	2078	2404	1879	0.011085	0.018217	A3	1	1545	-1.64	-0.216	holE	b1842	"DNA polymerase III, theta subunit"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
522	440	1.04	0.019	525	380	481	453	0.002671	0.003646	O5	4	3384	-1.22	-0.085	b1843	b1843	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
343	393	-1.00	0.000	330	598	368	464	0.002739	0.002787	A7	4	3385	-1.00	0.000	b1844	b1844	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-73	-58	-1.00	0.000	-32	81	-65	24	0.000143	-0.000494	K23	2	1726	1.00	0.000	ptrB	b1845	protease II	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
177	174	1.00	0.000	196	500	176	348	0.002055	0.001332	C7	4	3386	1.00	0.000	yebE	b1846	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4312	4224	1.02	0.009	10707	8657	4268	9682	0.057131	0.032342	E7	4	3387	1.77	0.247	yebF	b1847	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
962	948	1.01	0.006	805	1075	955	940	0.005548	0.007237	G7	4	3388	-1.30	-0.115	yebG	b1848	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3062	2761	1.11	0.045	2325	3101	2912	2713	0.016007	0.022064	O22	1	2008	-1.38	-0.139	purT	b1849	phosphoribosylglycinamide formyltransferase 2	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
1822	955	1.91	0.281	1418	429	1389	924	0.005450	0.010522	I12	3	2157	-1.93	-0.286	eda	b1850	2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Entner-Douderoff
2583	2515	1.03	0.012	1241	987	2549	1114	0.006572	0.019314	K12	3	2158	-2.94	-0.468	edd	b1851	6-phosphogluconate dehydratase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Entner-Douderoff
1349	729	1.85	0.267	5882	4863	1039	5372	0.031699	0.007872	B4	3	1353	4.03	0.605	zwf	b1852	glucose-6-phosphate dehydrogenase	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Oxidative branch, pentose pathway"
266	211	1.00	0.000	360	180	239	270	0.001594	0.001810	I7	4	3389	-1.00	0.000	yebK	b1853	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1335	1125	1.19	0.074	2685	2285	1230	2485	0.014663	0.009320	D4	3	1354	1.57	0.197	pykA	b1854	"pyruvate kinase II, glucose stimulated"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
634	822	-1.30	-0.113	1657	1474	728	1565	0.009237	0.005518	H4	1	1164	1.67	0.224	msbB	b1855	"suppressor of htrB, heat shock protein"	Putative factors	"putative factor; Adaptations, atypical conditions"
8391	9295	-1.11	-0.044	7002	6049	8843	6526	0.038506	0.067011	K7	4	3390	-1.74	-0.241	yebA	b1856	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
631	484	1.26	0.101	941	890	557	916	0.005403	0.004224	M7	4	3391	1.28	0.107	yebL	b1857	putative adhesin	Putative factors	putative factor; Not classified
680	611	1.11	0.046	1037	716	645	877	0.005173	0.004891	O7	4	3392	1.06	0.024	yebM	b1858	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
1181	1026	1.15	0.061	1214	1290	1104	1252	0.007385	0.008363	A9	4	3393	-1.13	-0.054	yebI	b1859	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1574	1148	1.37	0.137	1954	1881	1361	1918	0.011315	0.010314	C3	1	1546	1.10	0.040	ruvB	b1860	Holliday junction helicase subunit A; branch migration; repair	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
354	340	1.00	0.000	365	238	347	302	0.001782	0.002626	E3	1	1547	-1.00	0.000	ruvA	b1861	Holliday junction helicase subunit B; branch migration; repair	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1937	1932	1.00	0.001	2301	2034	1935	2167	0.012789	0.014660	C9	4	3394	-1.15	-0.059	yebB	b1862	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4874	4735	1.03	0.013	10686	8346	4804	9516	0.056149	0.036406	G3	1	1548	1.54	0.188	ruvC	b1863	Holliday junction nuclease; resolution of structures; repair	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1065	1142	-1.07	-0.030	1638	1324	1104	1481	0.008741	0.008363	E9	4	3395	1.05	0.019	yebC	b1864	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
405	508	-1.02	-0.006	766	691	456	729	0.004299	0.003457	M12	3	2159	1.24	0.095	ntpA	b1865	dATP pyrophosphohydrolase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Nucleotide interconversions
3217	3262	-1.01	-0.006	4530	4704	3240	4617	0.027244	0.024548	M23	2	1727	1.11	0.045	aspS	b1866	aspartate tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
831	904	-1.09	-0.036	1330	1676	867	1503	0.008870	0.006573	G9	4	3396	1.35	0.130	yecD	b1867	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
270	374	-1.00	0.000	551	433	322	492	0.002905	0.002442	I9	4	3397	1.00	0.000	yecE	b1868	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
673	717	-1.07	-0.028	231	142	695	187	0.001101	0.005264	K9	4	3398	-1.75	-0.244	yecN	b1869	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
735	877	-1.19	-0.077	490	846	806	668	0.003942	0.006106	M9	4	3399	-1.55	-0.190	yecO	b1870	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1530	1539	-1.01	-0.002	2864	2305	1535	2585	0.015251	0.011630	O9	4	3400	1.31	0.118	yecP	b1871	putative enzyme	Putative enzymes	putative enzyme; Not classified
486	525	-1.05	-0.021	828	337	505	582	0.003437	0.003828	O12	3	2160	-1.11	-0.047	bisZ	b1872	biotin sulfoxide reductase 2	Central intermediary metabolism	enzyme; Central intermediary metabolism
1396	956	1.46	0.164	2006	1502	1176	1754	0.010350	0.008910	F4	3	1355	1.16	0.065	yecK	b1873	putative cytochrome C-type protein	Putative enzymes	putative enzyme; Not classified
2191	1489	1.47	0.168	4978	4398	1840	4688	0.027661	0.013943	J4	1	1165	1.98	0.298	cutC	b1874	copper homeostasis protein	Putative transport proteins	putative transport; Detoxification
358	506	-1.01	-0.005	576	688	432	632	0.003730	0.003273	A11	4	3401	1.14	0.057	yecM	b1875	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1083	1308	-1.21	-0.082	1702	2402	1196	2052	0.012106	0.009061	O23	2	1728	1.34	0.126	argS	b1876	arginine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
150	64	1.00	0.000	106	93	107	100	0.000587	0.000809	C11	4	3402	-1.00	0.000	yecT	b1877	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
229	390	-1.00	0.000	156	338	309	247	0.001457	0.002343	E11	4	3403	-1.00	0.000	flhE	b1878	flagellar protein	Cell processes	structural component; Surface structures
12261	13047	-1.06	-0.027	26499	28638	12654	27569	0.162675	0.095888	E22	1	467	1.70	0.230	flhA	b1879	flagellar biosynthesis; possible export of flagellar proteins	Cell processes	structural component; Surface structures
3666	3800	-1.04	-0.016	10576	10588	3733	10582	0.062439	0.028287	L4	1	1166	2.21	0.344	flhB	b1880	putative part of export apparatus for flagellar proteins	Cell processes	structural component; Not classified
528	654	-1.24	-0.093	1473	1845	591	1659	0.009788	0.004477	N4	1	1167	2.19	0.340	cheZ	b1881	chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator	Regulatory function	regulator; Chemotaxis and mobility
363	437	-1.00	0.000	662	605	400	634	0.003739	0.003032	P4	1	1168	1.23	0.091	cheY	b1882	chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components	Regulatory function	regulator; Chemotaxis and mobility
1245	1425	-1.14	-0.058	2209	1926	1335	2068	0.012201	0.010116	B6	1	1169	1.21	0.081	cheB	b1883	response regulator for chemotaxis (cheA sensor); protein methylesterase	Cell processes	enzyme; Chemotaxis and mobility
1246	1172	1.06	0.026	1701	1674	1209	1687	0.009955	0.009161	D6	1	1170	1.09	0.036	cheR	b1884	response regulator for chemotaxis; protein glutamate methyltransferase	Cell processes	enzyme; Chemotaxis and mobility
2294	2211	1.04	0.016	2438	2123	2252	2280	0.013455	0.017067	F6	1	1171	-1.27	-0.103	tap	b1885	"methyl-accepting chemotaxis protein IV, peptide sensor receptor"	Regulatory function	regulator; Chemotaxis and mobility
4909	5105	-1.04	-0.017	9534	10121	5007	9827	0.057988	0.037944	H6	1	1172	1.53	0.184	tar	b1886	"methyl-accepting chemotaxis protein II, aspartate sensor receptor"	Regulatory function	regulator; Chemotaxis and mobility
9784	8947	1.09	0.039	15604	14673	9366	15138	0.089327	0.070971	J6	1	1173	1.26	0.100	cheW	b1887	positive regulator of CheA protein activity	Regulatory function	regulator; Chemotaxis and mobility
1796	1866	-1.04	-0.017	2770	2984	1831	2877	0.016975	0.013872	L6	1	1174	1.22	0.088	cheA	b1888	sensory transducer kinase between chemo- signal receptors and CheB and CheY	Cell processes	enzyme; Chemotaxis and mobility
2288	1988	1.15	0.061	2914	3504	2138	3209	0.018935	0.016204	N6	1	1175	1.17	0.068	motB	b1889	"enables flagellar motor rotation, linking torque machinery to cell wall"	Cell processes	structural component; Chemotaxis and mobility
4671	4120	1.13	0.054	9088	8795	4395	8942	0.052762	0.033306	P6	1	1176	1.58	0.200	motA	b1890	proton conductor component of motor; no effect on switching	Cell processes	phenotype; Chemotaxis and mobility
200	72	1.00	0.000	315	340	136	327	0.001932	0.001031	G22	1	468	1.00	0.000	flhC	b1891	regulator of flagellar biosynthesis acting on class 2 operons; transcription initiation factor?	Regulatory function	regulator; Surface structures
2299	2049	1.12	0.050	3115	3191	2174	3153	0.018606	0.016474	I22	1	469	1.13	0.053	flhD	b1892	"regulator of flagellar biosynthesis, acting on class 2 operons; transcriptional initiation factor?"	Regulatory function	regulator; Surface structures
1467	1437	1.02	0.009	1252	1166	1452	1209	0.007132	0.011001	A19	4	361	-1.54	-0.188	insB_5	b1893	IS1 protein InsB	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
12942	11980	1.08	0.034	21079	22387	12461	21733	0.128239	0.094427	C19	4	362	1.36	0.133	insA_5	b1894	IS1 protein InsA	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
288	349	-1.00	0.000	330	361	319	346	0.002041	0.002416	G11	4	3404	-1.00	0.000	yecG	b1895	putative regulator	Putative regulatory proteins	putative regulator; Not classified
952	683	1.39	0.144	1843	1819	817	1831	0.010804	0.006192	B8	1	1177	1.74	0.242	otsA	b1896	trehalose-6-phosphate synthase	Cell processes	enzyme; Osmotic adaptation
1449	1445	1.00	0.001	3264	2824	1447	3044	0.017962	0.010967	D8	1	1178	1.64	0.214	otsB	b1897	"trehalose-6-phosphate phophatase, biosynthetic"	Cell processes	enzyme; Osmotic adaptation
705	511	1.38	0.140	1052	901	608	977	0.005763	0.004609	C20	4	746	1.25	0.097	araH_2	b1898	"high-affinity L-arabinose transport system; membrane protein, fragment 2"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
663	850	-1.28	-0.108	1087	909	757	998	0.005888	0.005733	I11	4	3405	1.03	0.012	araH_1	b1899	"high-affinity L-arabinose transport system; membrane protein, interrupted"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
559	812	-1.45	-0.162	515	475	686	495	0.002921	0.005198	E20	4	747	-1.73	-0.239	araG	b1900	ATP-binding component of high-affinity L-arabinose transport system	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
259	214	1.00	0.000	279	305	237	292	0.001723	0.001792	G20	4	748	-1.00	0.000	araF	b1901	L-arabinose-binding periplasmic protein	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
985	858	1.15	0.060	1088	924	921	1006	0.005936	0.006982	K11	4	3406	-1.18	-0.070	yecI	b1902	ferritin-like protein	Putative transport proteins	putative carrier; Transport of small molecules: Cations
1865	1776	1.05	0.021	475	545	1821	510	0.003011	0.013797	M11	4	3407	-4.58	-0.661	b1903	b1903	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
423	337	1.00	0.000	411	336	380	374	0.002206	0.002881	O11	4	3408	-1.00	0.000	b1904	b1904	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2645	2273	1.16	0.066	1197	1267	2459	1232	0.007271	0.018631	I20	4	749	-2.56	-0.409	ftn	b1905	cytoplasmic ferritin (an iron storage protein)	Transport and binding proteins	carrier; Transport of small molecules: Cations
152	171	-1.00	0.000	-1	122	161	60	0.000356	0.001221	A13	4	3409	-1.00	0.000	yecH	b1906	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1924	2180	-1.13	-0.054	1910	2136	2052	2023	0.011937	0.015547	K20	4	750	-1.30	-0.115	tyrP	b1907	tyrosine-specific transport system	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
381	413	-1.00	0.000	203	394	397	298	0.001760	0.003009	C13	4	3410	-1.00	-0.001	yecA	b1908	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
534	529	1.01	0.004	962	841	532	901	0.005319	0.004029	M12	2	2063	1.32	0.121	pgsA	b1912	"phosphatidylglycerophosphate synthetase = CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase"	Fatty acid and phospholipid metabolism	"enzyme; Macromolecule synthesis, modification: Phospholipids"
1429	1521	-1.06	-0.027	1649	1820	1475	1735	0.010236	0.011177	K23	1	1630	-1.09	-0.038	uvrC	b1913	"excinuclease ABC, subunit C; repair of UV damage to DNA"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
655	575	1.14	0.057	2205	1726	615	1966	0.011601	0.004663	E9	3	227	2.49	0.396	uvrY	b1914	putative 2-component transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
85	117	-1.00	0.000	-57	42	101	-8	-0.000044	0.000764	E13	4	3411	-1.00	0.000	yecF	b1915	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5146	4042	1.27	0.105	6370	6422	4594	6396	0.037741	0.034812	F8	1	1179	1.08	0.035	sdiA	b1916	transcriptional regulator of ftsQAZ gene cluster	Regulatory function	regulator; Cell division
196	156	1.00	0.000	258	633	176	445	0.002627	0.001331	G13	4	3412	1.00	0.000	yecC	b1917	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
1431	1645	-1.15	-0.060	1552	1192	1538	1372	0.008097	0.011654	I13	4	3413	-1.44	-0.158	yecS	b1918	putative transport system permease protein (former yecC)	Putative transport proteins	putative transport; Not classified
3488	4011	-1.15	-0.061	2169	3067	3749	2618	0.015450	0.028412	F19	2	2475	-1.84	-0.265	yedO	b1919	putative 1-aminocyclopropane-1-carboxylate deaminase	Putative enzymes	putative enzyme; Not classified
10441	9465	1.10	0.043	14482	11361	9953	12921	0.076244	0.075425	H8	1	1180	1.01	0.005	fliY	b1920	putative periplasmic binding transport protein	Putative transport proteins	putative transport; Not classified
328	309	1.00	0.000	252	203	318	228	0.001344	0.002413	K13	4	3414	-1.00	0.000	fliZ	b1921	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	structural component; Unknown
175	141	1.00	0.000	351	334	158	343	0.002022	0.001201	K22	1	470	1.00	0.000	fliA	b1922	flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons	Regulatory function	factor; Surface structures
1545	1451	1.07	0.027	1973	1781	1498	1877	0.011078	0.011354	M22	1	471	-1.02	-0.011	fliC	b1923	"flagellar biosynthesis; flagellin, filament structural protein"	Cell processes	structural component; Surface structures
498	381	1.00	0.000	278	299	439	288	0.001701	0.003330	O22	1	472	-1.11	-0.045	fliD	b1924	flagellar biosynthesis; filament capping protein; enables filament assembly	Cell processes	putative structure; Surface structures
1222	1221	1.00	0.000	387	469	1222	428	0.002527	0.009256	J2	2	473	-3.09	-0.489	fliS	b1925	flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity)	Regulatory function	regulator; Surface structures
58	182	-1.00	0.000	414	231	120	322	0.001903	0.000911	C24	1	474	1.00	0.000	fliT	b1926	flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity)	Regulatory function	regulator; Surface structures
2133	2321	-1.09	-0.037	5076	5075	2227	5075	0.029948	0.016877	K9	1	38	1.77	0.249	amyA	b1927	cytoplasmic alpha-amylase	Carbon compound catabolism	enzyme; Degradation of polysaccharides
1329	1758	-1.32	-0.122	476	536	1543	506	0.002984	0.011695	M13	4	3415	-3.90	-0.591	yedD	b1928	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
657	597	1.10	0.042	1153	1004	627	1078	0.006363	0.004750	O13	4	3416	1.34	0.127	yedE	b1929	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
107	111	-1.00	0.000	24	-27	109	-1	-0.000009	0.000828	A15	4	3417	-1.00	0.000	yedF	b1930	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
775	910	-1.17	-0.069	1006	923	842	964	0.005689	0.006383	C15	4	3418	-1.12	-0.050	yedK	b1931	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
560	553	1.01	0.006	229	218	557	224	0.001319	0.004217	E15	4	3419	-1.41	-0.148	yedL	b1932	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
30	18	1.00	0.000	80	30	24	55	0.000324	0.000181	G15	4	3420	1.00	0.000	b1933	b1933	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1205	724	1.66	0.221	2368	977	964	1672	0.009869	0.007306	I15	4	3421	1.35	0.131	yedN	b1934	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
395	390	1.00	0.000	64	197	393	131	0.000770	0.002975	K15	4	3422	-1.00	0.000	yedM	b1935	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1038	910	1.14	0.057	623	678	974	651	0.003839	0.007381	M15	4	3423	-1.92	-0.284	b1936	b1936	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
155	83	1.00	0.000	95	63	119	79	0.000469	0.000902	E24	1	475	-1.00	0.000	fliE	b1937	"flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction"	Cell processes	structural component; Surface structures
230	410	-1.00	0.000	443	404	320	423	0.002499	0.002423	G24	1	476	1.00	0.000	fliF	b1938	flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein	Cell processes	structural component; Surface structures
938	988	-1.05	-0.023	1183	1088	963	1136	0.006703	0.007298	I24	1	477	-1.09	-0.037	fliG	b1939	"flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its direction"	Cell processes	structural component; Surface structures
6399	5963	1.07	0.031	4369	3739	6181	4054	0.023920	0.046838	K24	1	478	-1.96	-0.292	fliH	b1940	flagellar biosynthesis; export of flagellar proteins?	Cell processes	transport; Surface structures
269	157	1.00	0.000	319	278	213	299	0.001763	0.001615	J8	1	1181	1.00	0.000	fliI	b1941	flagellum-specific ATP synthase	Cell processes	enzyme; Surface structures
3246	1581	2.05	0.312	3560	3284	2413	3422	0.020191	0.018286	L8	1	1182	1.10	0.043	fliJ	b1942	flagellar fliJ protein	Cell processes	structural component; Surface structures
1655	1496	1.11	0.044	1289	1562	1576	1426	0.008412	0.011940	N8	1	1183	-1.42	-0.152	fliK	b1943	flagellar hook-length control protein	Cell processes	structural component; Surface structures
109	240	-1.00	0.000	223	143	175	183	0.001079	0.001325	M24	1	479	-1.00	0.000	fliL	b1944	flagellar biosynthesis	Cell processes	putative structure; Surface structures
583	508	1.15	0.060	644	331	545	487	0.002875	0.004133	O24	1	480	-1.38	-0.139	fliM	b1945	"flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction"	Cell processes	structural component; Surface structures
383	662	-1.32	-0.122	1313	1461	522	1387	0.008183	0.003959	A2	2	481	2.07	0.315	fliN	b1946	"flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction"	Cell processes	structural component; Surface structures
430	510	-1.02	-0.008	-177	369	470	96	0.000567	0.003561	C2	2	482	-1.19	-0.074	fliO	b1947	flagellar biosynthesis	Cell processes	putative structure; Surface structures
509	495	1.02	0.008	997	1100	502	1048	0.006184	0.003803	E2	2	483	1.63	0.211	fliP	b1948	flagellar biosynthesis	Cell processes	putative structure; Surface structures
284	233	1.00	0.000	843	554	259	698	0.004122	0.001960	G2	2	484	1.37	0.138	fliQ	b1949	flagellar biosynthesis	Cell processes	putative structure; Surface structures
970	1098	-1.13	-0.054	1996	1824	1034	1910	0.011270	0.007836	I2	2	485	1.44	0.158	fliR	b1950	flagellar biosynthesis	Cell processes	putative enzyme; Surface structures
71	172	-1.00	0.000	111	373	122	242	0.001429	0.000922	K2	2	486	1.00	0.000	rcsA	b1951	"positive regulator for ctr capsule biosynthesis, positive transcription factor"	Regulatory function	regulator; Surface polysaccharides & antigens
673	574	1.17	0.069	983	956	624	969	0.005719	0.004727	O15	4	3424	1.21	0.083	dsrB	b1952	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
52	78	-1.00	0.000	8	170	65	89	0.000527	0.000496	A17	4	3425	1.00	0.000	b1953	b1953	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
324	420	-1.00	0.000	606	595	372	600	0.003542	0.002821	C17	4	3426	1.18	0.072	b1955	b1955	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
784	681	1.15	0.061	584	895	733	740	0.004364	0.005551	E17	4	3427	-1.27	-0.104	b1956	b1956	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
36908	35338	1.04	0.019	39109	34964	36123	37036	0.218539	0.273733	G17	4	3428	-1.25	-0.098	b1957	b1957	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1446	1442	1.00	0.001	1949	1752	1444	1850	0.010918	0.010945	I17	4	3429	-1.00	-0.001	yedI	b1958	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
762	797	-1.05	-0.020	1287	1193	779	1240	0.007318	0.005906	K17	4	3430	1.24	0.093	yedA	b1959	putative transmembrane subunit	putative membrane protein	putative membrane; Not classified
2293	2017	1.14	0.056	2195	2002	2155	2098	0.012380	0.016328	M23	1	1631	-1.32	-0.120	vsr	b1960	"DNA mismatch endonuclease, patch repair protein"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
1220	968	1.26	0.101	1662	2021	1094	1841	0.010866	0.008291	I3	1	1549	1.31	0.117	dcm	b1961	DNA cytosine methylase	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
417	470	-1.00	0.000	831	705	443	768	0.004532	0.003360	M17	4	3431	1.35	0.130	yedJ	b1962	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
971	759	1.28	0.107	2598	1537	865	2068	0.012201	0.006554	O17	4	3432	1.86	0.270	b1963	b1963	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
38	133	-1.00	0.000	-21	74	86	27	0.000158	0.000649	A19	4	3433	-1.00	0.000	b1964	b1964	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
-88	-5	-1.00	0.000	-68	33	-46	-17	-0.000103	-0.000352	C19	4	3434	1.00	0.000	b1965	b1965	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2932	2711	1.08	0.034	2723	2219	2821	2471	0.014580	0.021380	E19	4	3435	-1.47	-0.166	b1966	b1966	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
12866	8852	1.45	0.162	11676	11026	10859	11351	0.066980	0.082288	G19	4	3436	-1.23	-0.089	yedU	b1967	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
191	184	1.00	0.000	287	306	188	296	0.001749	0.001421	I19	4	3437	1.00	0.000	yedV	b1968	putative 2-component sensor protein	Putative regulatory proteins	putative regulator; Not classified
262	227	1.00	0.000	357	216	245	286	0.001688	0.001854	K19	4	3438	-1.00	0.000	yedW	b1969	putative 2-component transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
43	71	-1.00	0.000	179	124	57	151	0.000893	0.000429	M19	4	3439	1.00	0.000	b1970	b1970	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
802	738	1.09	0.036	472	1415	770	943	0.005566	0.005833	H19	2	2476	-1.05	-0.020	b1971	b1971	putative reductase	Putative enzymes	putative enzyme; Not classified
242	246	-1.00	0.000	348	312	244	330	0.001949	0.001846	O19	4	3440	1.00	0.000	b1972	b1972	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
363	537	-1.07	-0.031	372	328	450	350	0.002064	0.003410	A21	4	3441	-1.14	-0.056	b1973	b1973	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
438	329	1.00	0.000	531	486	383	509	0.003001	0.002905	C21	4	3442	1.00	0.000	yodB	b1974	putative cytochrome	Putative enzymes	putative enzyme; Not classified
476	776	-1.55	-0.191	641	820	626	731	0.004312	0.004743	E21	4	3443	-1.10	-0.041	b1976	b1976	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
154	208	-1.00	0.000	222	165	181	194	0.001144	0.001368	G21	4	3444	-1.00	0.000	b1978	b1978	putative factor	Putative factors	putative factor; Not classified
107	77	1.00	0.000	17	111	92	64	0.000377	0.000697	I21	4	3445	-1.00	0.000	b1979	b1979	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
138	47	1.00	0.000	206	172	92	189	0.001116	0.000699	K21	4	3446	1.00	0.000	b1980	b1980	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2746	2548	1.08	0.032	5762	5592	2647	5677	0.033498	0.020057	P8	1	1184	1.67	0.223	shiA	b1981	"putative transport protein, shikimate"	Putative transport proteins	putative transport; Not classified
4112	3848	1.07	0.029	2821	2679	3980	2750	0.016228	0.030157	J6	2	2009	-1.86	-0.269	amn	b1982	AMP nucleosidase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
1031	1308	-1.27	-0.103	1216	1272	1170	1244	0.007339	0.008863	M21	4	3447	-1.21	-0.082	b1983	b1983	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1332	1407	-1.06	-0.024	1883	1538	1370	1711	0.010093	0.010379	O21	4	3448	-1.03	-0.012	yeeO	b1985	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
625	293	1.25	0.097	330	338	459	334	0.001972	0.003480	G9	3	228	-1.16	-0.065	cbl	b1987	transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM	Regulatory function	regulator; Amino acid biosynthesis: Cysteine
1816	1401	1.30	0.113	1313	914	1608	1114	0.006571	0.012187	I9	3	229	-1.85	-0.268	nac	b1988	nitrogen assimilation control protein	Regulatory function	regulator; Central intermediary metabolism
477	421	1.00	0.000	678	541	449	609	0.003596	0.003402	A23	4	3449	1.06	0.024	erfK	b1990	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
351	257	1.00	0.000	294	311	304	302	0.001784	0.002304	P5	1	2328	-1.00	0.000	cobT	b1991	nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Cobalamin"
298	352	-1.00	0.000	420	251	325	336	0.001982	0.002463	B7	1	2329	-1.00	0.000	cobS	b1992	cobalamin 5'-phosphate synthase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Cobalamin"
350	270	1.00	0.000	199	195	310	197	0.001163	0.002348	D7	1	2330	-1.00	0.000	cobU	b1993	cobinamide kinase/cobinamide phosphate guanylyltransferase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Cobalamin"
9670	10979	-1.14	-0.055	4255	4547	10324	4401	0.025970	0.078236	C23	4	3450	-3.01	-0.479	trs5_6	b1994	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
969	868	1.12	0.048	525	708	918	616	0.003637	0.006958	E23	4	3451	-1.91	-0.282	b1995	b1995	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2159	2498	-1.16	-0.063	967	1368	2329	1168	0.006890	0.017648	G23	4	3452	-2.56	-0.408	yi22_3	b1996	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
11023	10564	1.04	0.018	3851	3837	10793	3844	0.022684	0.081788	I23	4	3453	-3.61	-0.557	yi21_3	b1997	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
877	816	1.08	0.032	337	454	846	395	0.002334	0.006414	K23	4	3454	-2.14	-0.330	b1998	b1998	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
97	26	1.00	0.000	89	24	61	56	0.000333	0.000463	I8	3	605	-1.00	0.000	yeeP	b1999	putative histone	Putative cell structure	putative structure; Not classified
8360	8518	-1.02	-0.008	6880	7561	8439	7220	0.042604	0.063946	M23	4	3455	-1.50	-0.176	flu	b2000	"outer membrane fluffing protein, similar to adhesin"	Cell structure	membrane; Outer membrane constituents
3002	3808	-1.27	-0.103	2454	2342	3405	2398	0.014149	0.025801	O23	4	3456	-1.82	-0.261	b2001	b2001	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
452	241	1.00	0.000	522	691	346	606	0.003577	0.002624	K3	1	1550	1.19	0.076	yeeS	b2002	"putative DNA repair protein, RADC family"	Putative enzymes	putative enzyme; Not classified
2286	2380	-1.04	-0.018	5759	4998	2333	5379	0.031738	0.017678	A2	1	3457	1.80	0.254	yeeT	b2003	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1294	1240	1.04	0.019	1399	811	1267	1105	0.006518	0.009600	K8	3	606	-1.47	-0.168	yeeU	b2004	putative structural protein	Putative cell structure	putative structure; Not classified
9036	8933	1.01	0.005	26503	29376	8984	27939	0.164861	0.068080	C2	1	3458	2.42	0.384	yeeV	b2005	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1211	1168	1.04	0.016	1797	1768	1190	1782	0.010518	0.009014	E2	1	3459	1.17	0.067	yeeW	b2006	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3362	2852	1.18	0.071	6910	3357	3107	5133	0.030290	0.023545	M8	3	607	1.29	0.109	yeeX	b2007	putative alpha helix protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
1104	983	1.12	0.051	1705	1215	1043	1460	0.008616	0.007907	G2	1	3460	1.09	0.037	yeeA	b2008	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4186	3758	1.11	0.047	3838	3455	3972	3647	0.021519	0.030099	D13	4	2642	-1.40	-0.146	sbmC	b2009	SbmC protein	Putative factors	orf; Unknown function
219	154	1.00	0.000	288	247	186	268	0.001579	0.001410	M2	2	487	1.00	0.000	dacD	b2010	penicillin binding protein 6b	Cell processes	"putative enzyme; Murein sacculus, peptidoglycan"
975	827	1.18	0.072	639	721	901	680	0.004011	0.006828	O23	1	1632	-1.70	-0.231	sbcB	b2011	"exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
3517	2082	1.69	0.228	5714	5304	2800	5509	0.032508	0.021215	I2	1	3461	1.53	0.185	yeeD	b2012	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1464	1358	1.08	0.033	1902	2080	1411	1991	0.011749	0.010690	K2	1	3462	1.10	0.041	yeeE	b2013	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1718	1479	1.16	0.065	1800	1859	1599	1830	0.010796	0.012114	N3	3	975	-1.12	-0.050	yeeF	b2014	putative amino acid/amine transport protein	Putative transport proteins	putative transport; Not classified
327	205	1.00	0.000	626	326	266	476	0.002810	0.002013	K9	3	230	1.00	0.000	yeeY	b2015	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
843	1034	-1.23	-0.089	1802	1692	938	1747	0.010308	0.007111	J19	2	2477	1.45	0.161	b2016	b2016	putative enzyme of sugar metabolism	Putative enzymes	putative enzyme; Not classified
10038	10906	-1.09	-0.036	10851	14318	10472	12585	0.074259	0.079357	M2	1	3463	-1.07	-0.029	yefM	b2017	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
853	1121	-1.32	-0.119	1603	1639	987	1621	0.009564	0.007480	E19	4	1899	1.28	0.107	hisL	b2018	his operon leader peptide	Amino acid biosynthesis	leader; Amino acid biosynthesis: Histidine
4224	4354	-1.03	-0.013	4364	6049	4289	5206	0.030720	0.032501	G19	4	1900	-1.06	-0.024	hisG	b2019	ATP phosphoribosyltransferase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Histidine
4334	3458	1.25	0.098	4933	5038	3896	4986	0.029418	0.029519	I19	4	1901	-1.00	-0.001	hisD	b2020	L-histidinal:NAD+ oxidoreductase; L-histidinol:NAD+ oxidoreductase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Histidine
3284	3277	1.00	0.001	3315	3564	3280	3440	0.020297	0.024858	K19	4	1902	-1.22	-0.088	hisC	b2021	histidinol-phosphate aminotransferase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Histidine
2111	2712	-1.28	-0.109	2744	2876	2412	2810	0.016581	0.018274	M19	4	1903	-1.10	-0.042	hisB	b2022	imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Histidine
1780	1777	1.00	0.001	1548	1864	1778	1706	0.010066	0.013475	O19	4	1904	-1.34	-0.127	hisH	b2023	glutamine amidotransferase subunit of heterodimer with HisF = imidazole glycerol phosphate synthase holoenzyme	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Histidine
1143	1428	-1.25	-0.097	1484	1131	1285	1308	0.007717	0.009740	A21	4	1905	-1.26	-0.101	hisA	b2024	N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Histidine
12554	11550	1.09	0.036	15575	13945	12052	14760	0.087094	0.091330	C21	4	1906	-1.05	-0.021	hisF	b2025	imidazole glycerol phosphate synthase subunit in heterodimer with HisH = imidazole glycerol phsphate synthase holoenzyme	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Histidine
1889	1827	1.03	0.015	2795	2319	1858	2557	0.015090	0.014079	E21	4	1907	1.07	0.030	hisI	b2026	phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Histidine
17133	17118	1.00	0.000	16840	17516	17126	17178	0.101363	0.129775	O2	1	3464	-1.28	-0.107	wzzB	b2027	regulator of length of O-antigen component of lipopolysaccharide chains	Regulatory function	regulator; Outer membrane constituents
1109	982	1.13	0.053	1413	1624	1045	1519	0.008961	0.007922	A4	1	3465	1.13	0.054	ugd	b2028	UDP-glucose 6-dehydrogenase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
3386	3548	-1.05	-0.020	6525	6724	3467	6624	0.039088	0.026272	H4	3	1356	1.49	0.173	gnd	b2029	"gluconate-6-phosphate dehydrogenase, decarboxylating"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Oxidative branch, pentose pathway"
9768	7675	1.27	0.105	4699	3638	8721	4169	0.024598	0.066089	E19	4	363	-2.69	-0.429	trs5_7	b2030	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
2110	2218	-1.05	-0.022	4430	4653	2164	4542	0.026801	0.016401	L19	2	2478	1.63	0.213	yefJ	b2031	putative creatinase (EC 3.5.-)	Putative enzymes	putative enzyme; Not classified
1009	1000	1.01	0.004	771	722	1005	747	0.004407	0.007613	C4	1	3466	-1.73	-0.237	wbbK	b2032	putative glucose transferase	Putative enzymes	putative enzyme; Not classified
1108	1119	-1.01	-0.004	866	1459	1113	1163	0.006861	0.008436	N19	2	2479	-1.23	-0.090	wbbJ	b2033	putative O-acetyl transferase	Putative enzymes	putative enzyme; Not classified
862	582	1.48	0.171	1257	1096	722	1176	0.006941	0.005471	E4	1	3467	1.27	0.103	wbbI	b2034	putative Galf transferase	Putative enzymes	putative enzyme; Not classified
471	495	-1.00	0.000	606	1171	483	889	0.005243	0.003658	O2	2	488	1.43	0.156	wbbH	b2035	O-antigen polymerase	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
1933	2902	-1.50	-0.176	4339	3579	2418	3959	0.023362	0.018321	G4	1	3468	1.28	0.106	glf	b2036	UDP-galactopyranose mutase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
-175	62	-1.00	0.000	-278	94	-56	-92	-0.000543	-0.000427	A4	2	489	-1.00	0.000	rfbX	b2037	putative O-antigen transporter	Putative transport proteins	putative transport; Surface polysaccharides & antigens
2509	1238	2.03	0.307	1892	1236	1873	1564	0.009228	0.014195	A14	3	2161	-1.54	-0.187	rfbC	b2038	"dTDP-6-deoxy-D-glucose-3,5 epimerase"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
1436	1098	1.31	0.117	2276	1525	1267	1900	0.011212	0.009601	C14	3	2162	1.17	0.067	rfbA	b2039	glucose-1-phosphate thymidylyltransferase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
1712	1258	1.36	0.134	2223	1659	1485	1941	0.011456	0.011251	E14	3	2163	1.02	0.008	rfbD	b2040	dTDP-6-deoxy-L-mannose-dehydrogenase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
9716	8941	1.09	0.036	17043	16177	9329	16610	0.098010	0.070689	G14	3	2164	1.39	0.142	rfbB	b2041	"dTDP-glucose 4,6 dehydratase"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
1852	1530	1.21	0.083	2039	1341	1691	1690	0.009971	0.012814	I14	3	2165	-1.29	-0.109	galF	b2042	"homolog of Salmonella UTP--glucose-1-P uridyltransferase, probably a UDP-gal transferase"	Putative enzymes	"putative enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
2887	2700	1.07	0.029	2897	2876	2794	2887	0.017034	0.021171	I4	1	3469	-1.24	-0.094	wcaM	b2043	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1946	2237	-1.15	-0.060	3544	3624	2092	3584	0.021147	0.015850	P19	2	2480	1.33	0.125	wcaL	b2044	putative colanic acid biosynthesis glycosyl transferase	Putative enzymes	putative enzyme; Not classified
4007	5913	-1.48	-0.169	8620	9073	4960	8847	0.052201	0.037587	M9	1	39	1.39	0.143	wcaK	b2045	putative galactokinase (EC 2.7.1.6).	Putative enzymes	putative enzyme; Not classified
2366	2100	1.13	0.052	3173	3211	2233	3192	0.018836	0.016922	K4	1	3470	1.11	0.047	wzxC	b2046	probable export protein	Putative transport proteins	"putative transport; Protein, peptide secretion"
5389	5467	-1.01	-0.006	6165	8324	5428	7245	0.042749	0.041130	B21	2	2481	1.04	0.017	wcaJ	b2047	putative colanic acid biosynthsis UDP-glucose lipid carrier transferase	Putative enzymes	putative enzyme; Not classified
2741	2217	1.24	0.092	1734	1881	2479	1807	0.010665	0.018787	K14	3	2166	-1.76	-0.246	cpsG	b2048	phosphomannomutase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
1437	1398	1.03	0.012	1282	906	1418	1094	0.006454	0.010743	M14	3	2167	-1.66	-0.221	cpsB	b2049	mannose-1-phosphate guanyltransferase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
1078	1016	1.06	0.026	1660	1503	1047	1582	0.009332	0.007933	M4	1	3471	1.18	0.071	wcaI	b2050	putative colanic biosynthesis glycosyl transferase	Putative enzymes	putative enzyme; Not classified
10874	8737	1.24	0.095	7242	8119	9805	7680	0.045319	0.074302	O4	1	3472	-1.64	-0.215	wcaH	b2051	GDP-mannose mannosyl hydrolase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
774	798	-1.03	-0.013	1148	1202	786	1175	0.006934	0.005954	A6	1	3473	1.16	0.066	wcaG	b2052	putative nucleotide di-P-sugar epimerase or dehydratase	Putative enzymes	putative enzyme; Not classified
4699	5363	-1.14	-0.057	3059	3503	5031	3281	0.019359	0.038126	D21	2	2482	-1.97	-0.294	gmd	b2053	GDP-D-mannose dehydratase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
804	829	-1.03	-0.013	1592	2236	817	1914	0.011296	0.006188	F21	2	2483	1.83	0.261	wcaF	b2054	putative transferase	Putative enzymes	putative enzyme; Not classified
1367	1457	-1.07	-0.028	2679	3218	1412	2949	0.017399	0.010697	H21	2	2484	1.63	0.211	wcaE	b2055	putative colanic acid biosynthesis glycosyl transferase	Putative enzymes	putative enzyme; Not classified
784	397	1.57	0.196	1305	1116	591	1210	0.007140	0.004477	M9	3	231	1.59	0.203	wcaD	b2056	putative colanic acid polymerase	Putative enzymes	putative enzyme; Phage-related functions and prophages
407	220	1.00	0.000	468	345	313	406	0.002398	0.002374	C6	1	3474	1.00	0.000	wcaC	b2057	putative glycosyl transferase	Putative enzymes	putative enzyme; Not classified
5823	6546	-1.12	-0.051	6769	7219	6185	6994	0.041268	0.046865	G21	4	1908	-1.14	-0.055	wcaB	b2058	putative transferase	Putative enzymes	putative enzyme; Not classified
5440	5903	-1.09	-0.035	19749	20909	5672	20329	0.119956	0.042979	C4	2	490	2.79	0.446	wcaA	b2059	putative regulator	Putative regulatory proteins	putative regulator; Not classified
448	533	-1.07	-0.028	806	617	491	711	0.004197	0.003718	E6	1	3475	1.13	0.053	b2060	b2060	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
434	550	-1.10	-0.041	1120	947	492	1034	0.006100	0.003725	O9	3	232	1.64	0.214	wzb	b2061	probable protein-tyrosine-phosphatase	Putative regulatory proteins	putative enzyme; Not classified
767	2061	-2.69	-0.429	2380	4772	1414	3576	0.021101	0.010716	E4	2	491	1.97	0.294	wza	b2062	putative polysaccharide export protein	Putative transport proteins	putative transport; Not classified
4628	4683	-1.01	-0.005	6175	5983	4656	6079	0.035871	0.035279	G6	1	3476	1.02	0.007	yegH	b2063	putative transport protein	Putative transport proteins	putative transport; Not classified
1063	1276	-1.20	-0.079	1115	1637	1170	1376	0.008120	0.008863	J21	2	2485	-1.09	-0.038	asmA	b2064	suppressor of ompF assembly mutants	Cell processes	phenotype; Outer membrane constituents
5753	5715	1.01	0.003	3763	3547	5734	3655	0.021568	0.043451	C24	1	2010	-2.01	-0.304	dcd	b2065	2'-deoxycytidine 5'-triphosphate deaminase	Nucleotide biosynthesis and metabolism	enzyme; 2'-Deoxyribonucleotide metabolism
797	721	1.10	0.043	650	742	759	696	0.004108	0.005750	O14	3	2168	-1.40	-0.146	udk	b2066	uridine/cytidine kinase	Nucleotide biosynthesis and metabolism	enzyme; Central intermediary metabolism: Nucleotide interconversions
764	687	1.11	0.046	542	385	726	464	0.002735	0.005500	A11	3	233	-1.83	-0.263	yegE	b2067	putative sensor-type protein	Putative regulatory proteins	putative regulator; Not classified
1961	2375	-1.21	-0.083	3503	3870	2168	3687	0.021755	0.016430	M3	1	1551	1.32	0.122	alkA	b2068	"3-methyl-adenine DNA glycosylase II, inducible"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
941	1068	-1.13	-0.055	1814	2399	1005	2106	0.012429	0.007614	F2	2	1251	1.63	0.213	yegD	b2069	putative heat shock protein	Putative regulatory proteins	putative regulator; Not classified
1948	1927	1.01	0.005	3249	3616	1938	3432	0.020254	0.014684	L21	2	2486	1.38	0.140	b2070	b2070	putative chaperonin	Putative factors	putative factor; Not classified
1696	1623	1.05	0.019	2711	2505	1660	2608	0.015388	0.012576	I6	1	3477	1.22	0.088	b2071	b2071	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1617	1354	1.19	0.077	2792	2097	1486	2445	0.014424	0.011259	K6	1	3478	1.28	0.108	b2072	b2072	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1505	1371	1.10	0.040	2112	1385	1438	1749	0.010320	0.010895	M6	1	3479	-1.06	-0.024	b2073	b2073	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1777	1820	-1.02	-0.010	2425	2547	1798	2486	0.014669	0.013626	P3	3	976	1.08	0.032	b2074	b2074	putative membrane protein	putative membrane protein	putative membrane; Not classified
4743	3901	1.22	0.085	6992	6464	4322	6728	0.039700	0.032752	O6	1	3480	1.21	0.084	yegN	b2075	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1629	1313	1.24	0.094	1977	1990	1471	1984	0.011704	0.011149	A8	1	3481	1.05	0.021	yegO	b2076	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5713	3925	1.46	0.163	13396	8836	4819	11116	0.065593	0.036519	B5	3	977	1.80	0.254	yegB	b2077	putative transport protein	Putative transport proteins	putative transport; Not classified
762	641	1.19	0.075	556	624	701	590	0.003481	0.005314	D6	2	1633	-1.53	-0.184	baeS	b2078	sensor protein (for BaeR)	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
329	530	-1.06	-0.025	448	763	430	606	0.003574	0.003257	C1	2	1634	1.10	0.040	baeR	b2079	transcriptional response regulatory protein (sensor BaeS)	Regulatory function	"regulator; RNA synthesis, modification, DNA transcription"
1412	1547	-1.10	-0.040	3925	3423	1479	3674	0.021680	0.011209	C8	1	3482	1.93	0.286	b2080	b2080	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
995	1137	-1.14	-0.058	855	908	1066	881	0.005201	0.008077	E8	1	3483	-1.55	-0.191	yegQ	b2081	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1728	1958	-1.13	-0.054	3320	2725	1843	3022	0.017834	0.013965	G19	4	364	1.28	0.106	ogrK	b2082	prophage P2 ogr protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
693	551	1.26	0.099	362	391	622	376	0.002221	0.004711	G8	1	3484	-1.57	-0.196	b2083	b2083	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
402	385	1.00	0.000	493	608	394	550	0.003246	0.002984	I8	1	3485	1.08	0.034	b2084	b2084	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
209	357	-1.00	0.000	160	218	283	189	0.001115	0.002146	K8	1	3486	-1.00	0.000	b2085	b2085	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1048	1148	-1.09	-0.039	1352	1432	1098	1392	0.008212	0.008321	M8	1	3487	-1.01	-0.006	b2086	b2086	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
288	174	1.00	0.000	427	522	231	474	0.002799	0.001750	O9	1	40	1.00	0.000	gatR_1	b2087	"split galactitol utilization operon repressor, interrupted"	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
861	768	1.12	0.050	4478	3178	815	3828	0.022585	0.006174	P16	1	4288	3.66	0.563	b2088	b2088	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1277	1093	1.17	0.068	2817	2128	1185	2472	0.014588	0.008982	I19	4	365	1.62	0.211	tra5_4	b2089	IS3 putative transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
3002	2446	1.23	0.089	3646	3392	2724	3519	0.020766	0.020642	A11	1	41	1.01	0.003	gatR_2	b2090	"split galactitol utilization operon repressor, fragment 2"	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
4511	4627	-1.03	-0.011	6302	5852	4569	6077	0.035857	0.034623	C11	1	42	1.04	0.015	gatD	b2091	galactitol-1-phosphate dehydrogenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
5377	5326	1.01	0.004	1662	1764	5352	1713	0.010107	0.040553	M20	4	751	-4.01	-0.603	gatC	b2092	PTS system galactitol-specific enzyme IIC	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2285	1997	1.14	0.059	1207	1520	2141	1363	0.008044	0.016224	O20	4	752	-2.02	-0.305	gatB	b2093	galactitol-specific enzyme IIB of phosphotransferase system	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
4680	4539	1.03	0.013	1966	2269	4610	2118	0.012495	0.034932	A22	4	753	-2.80	-0.446	gatA	b2094	galactitol-specific enzyme IIA of phosphotransferase system	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
22238	22359	-1.01	-0.002	30573	28986	22299	29779	0.175719	0.168973	E11	1	43	1.04	0.017	gatZ	b2095	putative tagatose 6-phosphate kinase 1	Putative enzymes	putative enzyme; Not classified
16622	15728	1.06	0.024	20528	18313	16175	19421	0.114595	0.122572	G11	1	44	-1.07	-0.029	gatY	b2096	tagatose-bisphosphate aldolase 1	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
3701	4381	-1.18	-0.073	5326	5519	4041	5423	0.031997	0.030621	O8	1	3488	1.04	0.019	b2097	b2097	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3095	3050	1.01	0.006	4494	4126	3072	4310	0.025433	0.023281	D5	3	978	1.09	0.038	yegT	b2098	putative nucleoside permease protein	Putative transport proteins	putative transport; Not classified
2081	1779	1.17	0.068	1192	1372	1930	1282	0.007563	0.014624	A10	1	3489	-1.93	-0.286	b2099	b2099	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1178	1207	-1.02	-0.010	1615	1848	1193	1731	0.010214	0.009038	N21	2	2487	1.13	0.053	b2100	b2100	putative kinase	Putative enzymes	putative enzyme; Not classified
55408	52237	1.06	0.026	33338	35867	53823	34602	0.204179	0.407856	C10	1	3490	-2.00	-0.300	yegW	b2101	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1687	1833	-1.09	-0.036	631	449	1760	540	0.003186	0.013336	E10	1	3491	-4.19	-0.622	yegX	b2102	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1337	974	1.37	0.138	885	739	1155	812	0.004792	0.008756	G10	1	3492	-1.83	-0.262	thiD	b2103	phosphomethylpyrimidine kinase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thiamin"
7737	8122	-1.05	-0.021	17136	18739	7929	17937	0.105843	0.060087	P21	2	2488	1.76	0.246	thiM	b2104	hydoxyethylthiazole kinase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thiamin"
790	916	-1.16	-0.065	443	892	853	667	0.003938	0.006466	I10	1	3493	-1.64	-0.215	yohL	b2105	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
257	301	-1.00	0.000	281	307	279	294	0.001734	0.002113	K10	1	3494	-1.00	0.000	yohM	b2106	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
10699	10691	1.00	0.000	4726	4785	10695	4755	0.028059	0.081046	M10	1	3495	-2.89	-0.461	b2107	b2107	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
516	588	-1.14	-0.057	192	601	552	397	0.002340	0.004182	G4	2	492	-1.39	-0.144	yehA	b2108	putative type-1 fimbrial protein	Putative cell structure	putative structure; Not classified
125873	145118	-1.15	-0.062	78532	72131	135495	75331	0.444508	1.026749	O10	1	3496	-2.31	-0.364	yehB	b2109	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
104	179	-1.00	0.000	124	385	141	255	0.001503	0.001071	H2	2	1252	1.00	0.000	yehC	b2110	putative chaperone	Putative factors	putative factor; Not classified
84	330	-1.00	0.000	-163	371	207	104	0.000612	0.001565	I4	2	493	-1.00	0.000	yehD	b2111	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
743	782	-1.05	-0.022	413	448	762	431	0.002541	0.005774	A12	1	3497	-1.92	-0.284	yehE	b2112	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1821	1548	1.18	0.071	1370	815	1684	1092	0.006446	0.012762	A16	3	2169	-1.98	-0.297	mrp	b2113	putative ATPase	Putative enzymes	putative enzyme; Not classified
16526	16820	-1.02	-0.008	16573	16708	16673	16640	0.098191	0.126346	F6	2	1729	-1.29	-0.109	metG	b2114	methionine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
1117	1024	1.09	0.038	1650	1783	1071	1717	0.010130	0.008113	C22	4	754	1.25	0.096	molR_1	b2115	"molybdate metabolism regulator, first fragment"	Regulatory function	"regulator; Biosynthesis of cofactors, carriers: Molybdopterin"
2022	2092	-1.03	-0.015	2940	2851	2057	2895	0.017083	0.015588	E22	4	755	1.10	0.040	molR_2	b2116	"molybdate metabolism regulator, second fragment 2"	Regulatory function	"regulator; Biosynthesis of cofactors, carriers: Molybdopterin"
1708	1370	1.25	0.096	1153	1230	1539	1192	0.007031	0.011662	G22	4	756	-1.66	-0.220	molR_3	b2117	"molybdate metabolism regulator, third fragment"	Regulatory function	"regulator; Biosynthesis of cofactors, carriers: Molybdopterin"
91558	98417	-1.07	-0.031	57551	39700	94987	48625	0.286924	0.719792	C12	1	3498	-2.51	-0.399	yehI	b2118	putative regulator	Putative regulatory proteins	putative regulator; Not classified
5322	3880	1.37	0.137	4012	3764	4601	3888	0.022944	0.034867	E12	1	3499	-1.52	-0.182	yehL	b2119	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1528	1448	1.06	0.023	1933	1270	1488	1602	0.009451	0.011278	G12	1	3500	-1.19	-0.077	yehM	b2120	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
654	637	1.03	0.012	837	620	645	729	0.004299	0.004891	I12	1	3501	-1.14	-0.056	yehP	b2121	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
421	437	-1.00	0.000	669	527	429	598	0.003527	0.003253	K12	1	3502	1.08	0.035	yehQ	b2122	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
109	380	-1.00	0.000	259	185	245	222	0.001311	0.001855	M12	1	3503	-1.00	0.000	yehR	b2123	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1157	1121	1.03	0.014	1216	1027	1139	1122	0.006620	0.008629	O12	1	3504	-1.30	-0.115	yehS	b2124	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
677	780	-1.15	-0.061	552	597	729	575	0.003390	0.005521	A14	1	3505	-1.63	-0.212	yehT	b2125	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
30224	28540	1.06	0.025	25698	24898	29382	25298	0.149277	0.222649	C14	1	3506	-1.49	-0.174	yehU	b2126	putative 2-component sensor protein	Putative regulatory proteins	putative regulator; Not classified
1249	753	1.66	0.219	911	1043	1001	977	0.005763	0.007585	E14	1	3507	-1.32	-0.119	yehV	b2127	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
729	355	1.46	0.163	1208	730	542	969	0.005718	0.004103	F5	3	979	1.39	0.144	yehW	b2128	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
2702	1885	1.43	0.156	2695	3519	2293	3107	0.018331	0.017378	H5	3	980	1.05	0.023	yehX	b2129	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
2084	2053	1.02	0.006	2371	2036	2068	2204	0.013003	0.015673	G14	1	3508	-1.21	-0.081	yehY	b2130	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
4916	6757	-1.37	-0.138	12308	11209	5836	11759	0.069385	0.044228	J5	3	981	1.57	0.196	yehZ	b2131	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1590	1787	-1.12	-0.051	3704	3289	1688	3496	0.020631	0.012794	I11	1	45	1.61	0.208	bglX	b2132	"beta-D-glucoside glucohydrolase, periplasmic"	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1418	850	1.67	0.222	4019	3530	1134	3774	0.022272	0.008592	J4	3	1357	2.59	0.414	dld	b2133	"D-lactate dehydrogenase, FAD protein, NADH independent"	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
1446	1379	1.05	0.021	3052	3249	1413	3151	0.018591	0.010706	K4	2	494	1.74	0.240	pbpG	b2134	penicillin-binding protein 7	Cell processes	"putative enzyme; Murein sacculus, peptidoglycan"
405	451	-1.00	0.000	536	526	428	531	0.003133	0.003244	I14	1	3509	-1.04	-0.015	yohC	b2135	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1160	1418	-1.22	-0.087	1687	2006	1289	1847	0.010896	0.009768	K14	1	3510	1.12	0.047	yohD	b2136	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1140	1411	-1.24	-0.093	779	1364	1275	1071	0.006322	0.009664	B23	2	2489	-1.53	-0.184	yohF	b2137	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
19734	16922	1.17	0.067	23992	17795	18328	20894	0.123287	0.138884	L5	3	982	-1.13	-0.052	yohG	b2138	putative channel/filament proteins	"Hypothetical, unclassified, unknown"	orf; Not classified
243	168	1.00	0.000	145	157	205	151	0.000890	0.001556	M14	1	3511	-1.00	0.000	yohH	b2139	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
359	192	1.00	0.000	546	419	276	483	0.002848	0.002089	C11	3	234	1.00	0.000	yohI	b2140	putative regulator protein	Putative regulatory proteins	putative regulator; Not classified
1951	1770	1.10	0.042	1312	991	1861	1152	0.006795	0.014100	O14	1	3512	-2.08	-0.317	yohJ	b2141	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1518	1449	1.05	0.020	1396	1132	1484	1264	0.007457	0.011244	N5	3	983	-1.51	-0.178	yohK	b2142	putative seritonin transporter	Putative transport proteins	putative transport; Not classified
1456	1352	1.08	0.032	1133	1323	1404	1228	0.007246	0.010639	E24	1	2011	-1.47	-0.167	cdd	b2143	cytidine/deoxycytidine deaminase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
1225	1002	1.22	0.087	1439	1477	1113	1458	0.008605	0.008435	B10	1	1185	1.02	0.009	sanA	b2144	vancomycin sensitivity	Cell processes	transport; Drug/analog sensitivity
1124	928	1.21	0.083	922	1026	1026	974	0.005748	0.007772	A16	1	3513	-1.35	-0.131	b2145	b2145	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2941	3096	-1.05	-0.022	3630	4345	3018	3988	0.023530	0.022872	D23	2	2490	1.03	0.012	b2146	b2146	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
5122	4898	1.05	0.019	10998	9235	5010	10116	0.059694	0.037964	F23	2	2491	1.57	0.197	yeiA	b2147	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
1745	1799	-1.03	-0.013	918	1189	1772	1053	0.006215	0.013425	I22	4	757	-2.16	-0.334	mglC	b2148	methyl-galactoside transport and galactose taxis	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
405	282	1.00	0.000	211	213	343	212	0.001253	0.002602	K22	4	758	-1.00	0.000	mglA	b2149	ATP-binding component of methyl-galactoside transport and galactose taxis	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1728	1838	-1.06	-0.027	726	944	1783	835	0.004927	0.013513	M22	4	759	-2.74	-0.438	mglB	b2150	galactose-binding transport protein; receptor for galactose taxis	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
361	290	1.00	0.000	710	673	325	691	0.004079	0.002464	K11	1	46	1.36	0.133	galS	b2151	"mgl repressor, galactose operon inducer"	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
597	727	-1.22	-0.085	727	634	662	680	0.004014	0.005017	C16	1	3514	-1.25	-0.097	yeiB	b2152	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2772	2978	-1.07	-0.031	4092	3461	2875	3776	0.022284	0.021786	F7	1	2331	1.02	0.010	folE	b2153	GTP cyclohydrolase I	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Folic acid"
1566	1075	1.46	0.163	1466	1254	1321	1360	0.008024	0.010009	C16	3	2170	-1.25	-0.096	yeiG	b2154	putative esterase (EC 3.1.1.-).	"Hypothetical, unclassified, unknown"	orf; Not classified
8999	8179	1.10	0.041	7482	9449	8589	8465	0.049952	0.065084	O22	4	760	-1.30	-0.115	cirA	b2155	outer membrane receptor for iron-regulated colicin I receptor; porin; requires tonB gene product	Transport and binding proteins	membrane; Outer membrane constituents
2468	2130	1.16	0.064	2135	2036	2299	2085	0.012305	0.017421	P2	2	761	-1.42	-0.151	lysP	b2156	lysine-specific permease	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
705	452	1.41	0.149	1428	685	579	1056	0.006232	0.004386	E11	3	235	1.42	0.153	yeiE	b2157	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
1832	1554	1.18	0.072	1447	1237	1693	1342	0.007918	0.012829	E16	1	3515	-1.62	-0.210	yeiH	b2158	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1058	1261	-1.19	-0.076	1811	3185	1160	2498	0.014741	0.008787	E1	2	1635	1.68	0.225	nfo	b2159	endonuclease IV	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
608	702	-1.15	-0.062	1179	992	655	1085	0.006404	0.004962	M11	1	47	1.29	0.111	yeiI	b2160	putative kinase	Putative enzymes	putative enzyme; Not classified
715	627	1.14	0.057	672	664	671	668	0.003940	0.005087	P5	3	984	-1.29	-0.111	yeiJ	b2161	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
4042	4214	-1.04	-0.018	4217	4262	4128	4239	0.025015	0.031281	G16	1	3516	-1.25	-0.097	yeiK	b2162	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
694	877	-1.26	-0.102	561	419	786	490	0.002892	0.005954	G11	3	236	-1.98	-0.298	yeiL	b2163	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
568	269	1.14	0.055	930	892	418	911	0.005375	0.003170	B7	3	985	1.70	0.229	yeiM	b2164	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1640	1588	1.03	0.014	1011	1252	1614	1131	0.006674	0.012232	I16	1	3517	-1.83	-0.263	yeiN	b2165	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3749	4444	-1.19	-0.074	5922	7188	4096	6555	0.038678	0.031042	H23	2	2492	1.25	0.096	yeiC	b2166	putative kinase	Putative enzymes	putative enzyme; Not classified
2134	2191	-1.03	-0.012	2833	3605	2163	3219	0.018994	0.016389	O11	1	48	1.16	0.064	fruA	b2167	"PTS system, fructose-specific transport protein"	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
554	311	1.11	0.045	1181	954	433	1067	0.006299	0.003279	L4	3	1358	1.92	0.284	fruK	b2168	fructose-1-phosphate kinase	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
1361	1278	1.06	0.027	1082	1250	1319	1166	0.006880	0.009998	C24	4	762	-1.45	-0.162	fruB	b2169	"PTS system, fructose-specific IIA/fpr component"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1150	759	1.52	0.181	1820	997	954	1408	0.008310	0.007233	D7	3	986	1.15	0.060	yeiO	b2170	putative transport	"Hypothetical, unclassified, unknown"	orf; Not classified
827	784	1.05	0.023	754	692	806	723	0.004268	0.006104	K16	1	3518	-1.43	-0.155	yeiP	b2171	putative elongation factor	Putative factors	putative factor; Not classified
1361	1271	1.07	0.030	3552	3613	1316	3582	0.021139	0.009973	A13	1	49	2.12	0.326	yeiQ	b2172	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
426	518	-1.04	-0.015	623	722	472	672	0.003967	0.003573	M16	1	3519	1.11	0.045	yeiR	b2173	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
396	516	-1.03	-0.014	569	706	456	638	0.003762	0.003455	O16	1	3520	1.09	0.037	b2174	b2174	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5194	4985	1.04	0.018	5828	6001	5090	5914	0.034899	0.038567	O8	3	608	-1.11	-0.043	spr	b2175	putative lipoprotein	putative membrane protein	putative membrane; Not classified
4146	3763	1.10	0.042	6835	5138	3954	5986	0.035323	0.029966	A18	1	3521	1.18	0.071	rtn	b2176	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6855	6838	1.00	0.001	7744	7488	6847	7616	0.044938	0.051882	C18	1	3522	-1.15	-0.062	yejA	b2177	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3306	3204	1.03	0.014	3869	3442	3255	3656	0.021571	0.024667	E18	1	3523	-1.14	-0.058	yejB	b2178	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1092	1099	-1.01	-0.003	1921	1589	1095	1755	0.010356	0.008298	E24	4	763	1.25	0.096	yejE	b2179	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
2464	2453	1.00	0.002	1913	2377	2458	2145	0.012659	0.018627	G24	4	764	-1.47	-0.168	yejF	b2180	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
429	635	-1.27	-0.104	591	333	532	462	0.002724	0.004030	G18	1	3524	-1.34	-0.128	yejG	b2181	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3105	3024	1.03	0.012	9014	8303	3065	8658	0.051089	0.023223	D10	1	1186	2.20	0.342	bcr	b2182	bicyclomycin resistance protein; transmembrane protein	Cell processes	transport; Drug/analog sensitivity
934	932	1.00	0.001	964	1094	933	1029	0.006074	0.007071	I18	1	3525	-1.16	-0.066	rsuA	b2183	16S pseudouridylate 516 synthase	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
1403	1827	-1.30	-0.115	3050	2630	1615	2840	0.016758	0.012239	O3	1	1552	1.37	0.136	yejH	b2184	putative ATP-dependent helicase	Putative enzymes	putative enzyme; Not classified
11756	10361	1.13	0.055	11944	6702	11059	9323	0.055014	0.083800	C1	3	1730	-1.52	-0.183	rplY	b2185	50S ribosomal subunit protein L25	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
3236	2608	1.24	0.094	4726	3076	2922	3901	0.023020	0.022142	K18	1	3526	1.04	0.017	yejK	b2186	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1044	734	1.42	0.153	1290	1091	889	1191	0.007025	0.006736	M18	1	3527	1.04	0.018	yejL	b2187	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1083	466	2.17	0.336	1367	968	774	1167	0.006888	0.005868	E16	3	2171	1.17	0.070	yejM	b2188	putative sulfatase	Putative enzymes	putative enzyme; Not classified
8042	5415	1.49	0.172	11767	9534	6729	10651	0.062846	0.050988	E1	3	1731	1.23	0.091	yejO	b2190	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
710	785	-1.11	-0.044	800	719	748	759	0.004481	0.005666	O18	1	3528	-1.26	-0.102	b2191	b2191	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
10087	12294	-1.22	-0.086	3813	5021	11191	4417	0.026063	0.084800	K19	4	366	-3.25	-0.512	trs5_8	b2192	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
4584	4129	1.11	0.045	13813	12418	4356	13116	0.077391	0.033011	N4	3	1359	2.34	0.370	narP	b2193	nitrate/nitrite response regulator (sensor NarQ)	Regulatory function	"regulator; Energy metabolism, carbon: Anaerobic respiration"
1685	1608	1.05	0.020	2015	1623	1647	1819	0.010734	0.012477	P4	3	1360	-1.16	-0.065	ccmH	b2194	possible subunit of heme lyase	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Electron transport"
2441	601	4.06	0.609	9038	8053	1521	8546	0.050425	0.011524	B6	3	1361	4.38	0.641	dsbE	b2195	disulfide oxidoreductase (in biogenesis of cytochrome c?	Energy metabolism	"enzyme; Energy metabolism, carbon: Electron transport"
1332	1245	1.07	0.029	3557	3715	1289	3636	0.021452	0.009766	D6	3	1362	2.20	0.342	ccmF	b2196	cytochrome c-type biogenesis protein	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Electron transport"
269	286	-1.00	0.000	327	421	278	374	0.002206	0.002103	F6	3	1363	1.00	0.000	ccmE	b2197	"cytochrome c biogenesis, possible subunit of a heme lyase"	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Electron transport"
194	244	-1.00	0.000	562	175	219	368	0.002174	0.001660	H6	3	1364	1.00	0.000	ccmD	b2198	heme exporter protein C	Transport and binding proteins	"transport; Protein, peptide secretion"
444	230	1.00	0.000	642	288	337	465	0.002746	0.002553	J6	3	1365	1.00	0.000	ccmC	b2199	heme exporter protein C	Transport and binding proteins	"transport; Protein, peptide secretion"
665	524	1.27	0.103	888	293	595	590	0.003483	0.004506	L6	3	1366	-1.29	-0.112	ccmB	b2200	"heme exporter protein B, cytochrome c-type biogenesis protein"	Transport and binding proteins	"transport; Protein, peptide secretion"
16957	14179	1.20	0.078	50976	45450	15568	48213	0.284492	0.117972	N6	3	1367	2.41	0.382	ccmA	b2201	ATP binding protein of heme exporter A	Transport and binding proteins	"transport; Protein, peptide secretion"
332	134	1.00	0.000	952	798	233	875	0.005164	0.001767	P6	3	1368	1.72	0.236	napC	b2202	cytochrome c-type protein	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Electron transport"
90	106	-1.00	0.000	220	-15	98	103	0.000605	0.000742	B8	3	1369	-1.00	0.000	napB	b2203	cytochrome c-type protein	Energy metabolism	"carrier; Energy metabolism, carbon: Electron transport"
422	281	1.00	0.000	924	1151	351	1037	0.006120	0.002663	D8	3	1370	2.04	0.310	napH	b2204	ferredoxin-type protein: electron transfer	Energy metabolism	"carrier; Energy metabolism, carbon: Electron transport"
23934	20591	1.16	0.065	39310	37479	22262	38395	0.226555	0.168699	F8	3	1371	1.34	0.128	napG	b2205	ferredoxin-type protein: electron transfer	Energy metabolism	"carrier; Energy metabolism, carbon: Electron transport"
1203	798	1.51	0.178	2794	1871	1000	2332	0.013763	0.007579	H8	3	1372	1.82	0.259	napA	b2206	probable nitrate reductase 3	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Anaerobic respiration"
3317	3205	1.03	0.015	6519	4980	3261	5749	0.033925	0.024713	A20	1	3529	1.37	0.138	napD	b2207	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
130	116	1.00	0.000	235	233	123	234	0.001381	0.000931	J8	3	1373	1.00	0.000	napF	b2208	ferredoxin-type protein: electron transfer	Energy metabolism	"carrier; Energy metabolism, carbon: Electron transport"
4846	4547	1.07	0.028	5360	3544	4696	4452	0.026267	0.035588	G1	3	1732	-1.35	-0.132	eco	b2209	"ecotin, a serine protease inhibitor"	Regulatory function	"regulator; Degradation of proteins, peptides, glyco"
4118	3840	1.07	0.030	1912	1948	3979	1930	0.011387	0.030150	C20	1	3530	-2.65	-0.423	yojH	b2210	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2884	2390	1.21	0.082	3802	4265	2637	4033	0.023798	0.019984	F7	3	987	1.19	0.076	yojI	b2211	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
1705	1713	-1.00	-0.002	1137	1184	1709	1160	0.006847	0.012949	A5	1	1553	-1.89	-0.277	alkB	b2212	DNA repair system specific for alkylated DNA	"DNA replication, repair, restriction/modification"	"putative enzyme; DNA - replication, repair, restriction/modification"
420	469	-1.00	0.000	997	742	445	869	0.005130	0.003371	C5	1	1554	1.52	0.182	ada	b2213	O6-methylguanine-DNA methyltransferase; transcription activator/repressor	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1221	1113	1.10	0.040	713	539	1167	626	0.003695	0.008843	E20	1	3531	-2.39	-0.379	yojL	b2214	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
13152	13641	-1.04	-0.016	22351	23697	13396	23024	0.135857	0.101514	M4	2	495	1.34	0.127	ompC	b2215	outer membrane protein 1b (Ib;c)	Cell structure	membrane; Outer membrane constituents
2143	1507	1.42	0.153	2751	2468	1825	2610	0.015398	0.013829	I11	3	237	1.11	0.047	yojN	b2216	putative 2-component sensor protein	Putative regulatory proteins	putative regulator; Not classified
449	680	-1.36	-0.133	1401	1935	564	1668	0.009843	0.004277	O4	2	496	2.30	0.362	rcsB	b2217	"positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)"	Regulatory function	regulator; Surface polysaccharides & antigens
1371	1531	-1.12	-0.048	1709	2501	1451	2105	0.012419	0.010996	A6	2	497	1.13	0.053	rcsC	b2218	"sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB"	Cell structure	enzyme; Surface polysaccharides & antigens
1102	1107	-1.00	-0.002	2423	2330	1104	2377	0.014025	0.008369	K11	3	238	1.68	0.224	atoS	b2219	sensor protein AtoS for response regulator AtoC	Regulatory function	regulator; Not classified
664	552	1.20	0.080	1444	1470	608	1457	0.008598	0.004608	O12	2	2064	1.87	0.271	atoC	b2220	"response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS)"	Regulatory function	regulator; Degradation of small molecules: Fatty acids
2834	2720	1.04	0.018	5493	5765	2777	5629	0.033215	0.021044	J23	2	2493	1.58	0.198	atoD	b2221	acetyl-CoA:acetoacetyl-CoA transferase alpha subunit	Fatty acid and phospholipid metabolism	enzyme; Degradation of small molecules: Fatty acids
1402	1554	-1.11	-0.045	3515	3026	1478	3270	0.019296	0.011200	L23	2	2494	1.72	0.236	atoA	b2222	acetyl-CoA:acetoacetyl-CoA transferase beta subunit	Fatty acid and phospholipid metabolism	enzyme; Degradation of small molecules: Fatty acids
787	783	1.01	0.002	590	234	785	412	0.002429	0.005949	G20	1	3532	-1.98	-0.297	atoE	b2223	short chain fatty acid transporter	Transport and binding proteins	transport; Degradation of small molecules: Fatty acids
4037	5262	-1.30	-0.115	8034	8674	4650	8354	0.049296	0.035236	N23	2	2495	1.40	0.146	atoB	b2224	acetyl-CoA acetyltransferase	Fatty acid and phospholipid metabolism	enzyme; Degradation of small molecules: Fatty acids
728	469	1.46	0.163	913	609	599	761	0.004490	0.004535	I20	1	3533	-1.01	-0.004	b2225	b2225	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
640	519	1.23	0.091	567	587	580	577	0.003405	0.004392	K20	1	3534	-1.29	-0.111	b2226	b2226	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3468	2691	1.29	0.110	4364	3522	3080	3943	0.023268	0.023339	M20	1	3535	-1.00	-0.001	b2227	b2227	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
331	135	1.00	0.000	227	265	233	246	0.001451	0.001765	O20	1	3536	-1.00	0.000	b2228	b2228	putative membrane protein	putative membrane protein	putative membrane; Not classified
2411	2008	1.20	0.080	2097	1867	2209	1982	0.011695	0.016743	A22	1	3537	-1.43	-0.156	b2229	b2229	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1768	1881	-1.06	-0.027	1555	891	1825	1223	0.007217	0.013827	C22	1	3538	-1.92	-0.282	yfaA	b2230	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3352	4233	-1.26	-0.101	7174	6419	3792	6797	0.040106	0.028736	E5	1	1555	1.40	0.145	gyrA	b2231	"DNA gyrase, subunit A, type II topoisomerase"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
3479	3193	1.09	0.037	3379	4720	3336	4049	0.023895	0.025280	H7	1	2332	-1.06	-0.024	ubiG	b2232	3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
77	142	-1.00	0.000	127	45	109	86	0.000507	0.000828	E22	1	3539	-1.00	0.000	yfaL	b2233	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
9656	9424	1.02	0.011	9406	9637	9540	9521	0.056183	0.072293	G24	1	2012	-1.29	-0.109	nrdA	b2234	"ribonucleoside diphosphate reductase 1, alpha subunit, B1"	Nucleotide biosynthesis and metabolism	enzyme; 2'-Deoxyribonucleotide metabolism
810	730	1.11	0.046	800	890	770	845	0.004988	0.005834	I24	1	2013	-1.17	-0.068	nrdB	b2235	"ribonucleoside-diphosphate reductase 1, beta subunit, B2"	Nucleotide biosynthesis and metabolism	enzyme; 2'-Deoxyribonucleotide metabolism
674	716	-1.06	-0.027	662	610	695	636	0.003753	0.005267	G22	1	3540	-1.40	-0.147	yfaE	b2236	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
387	241	1.00	0.000	486	417	314	451	0.002664	0.002379	F10	1	1187	1.00	0.000	inaA	b2237	pH-inducible protein involved in stress response	Cell processes	"phenotype; Adaptations, atypical conditions"
261	300	-1.00	0.000	196	166	281	181	0.001067	0.002126	I22	1	3541	-1.00	0.000	yfaH	b2238	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
580	200	1.16	0.065	504	858	390	681	0.004021	0.002957	G16	3	2172	1.34	0.127	glpQ	b2239	"glycerophosphodiester phosphodiesterase, periplasmic"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
12100	11950	1.01	0.005	13324	16500	12025	14912	0.087993	0.091120	I24	4	765	-1.04	-0.015	glpT	b2240	sn-glycerol-3-phosphate permease	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
436	506	-1.01	-0.005	771	379	471	575	0.003395	0.003568	L8	3	1374	-1.05	-0.022	glpA	b2241	"sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
3468	2624	1.32	0.121	6250	5687	3046	5968	0.035217	0.023082	N8	3	1375	1.53	0.183	glpB	b2242	"sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
1233	1123	1.10	0.041	3245	2963	1178	3104	0.018314	0.008923	P8	3	1376	2.05	0.312	glpC	b2243	"sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
671	707	-1.05	-0.023	213	263	689	238	0.001403	0.005222	K22	1	3542	-1.74	-0.241	yfaD	b2244	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
405	365	1.00	0.000	247	302	385	275	0.001621	0.002916	M22	1	3543	-1.00	0.000	b2245	b2245	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1172	1290	-1.10	-0.042	3699	3392	1231	3546	0.020923	0.009327	H7	3	988	2.24	0.351	b2246	b2246	putative transport protein	Putative transport proteins	putative transport; Not classified
2674	3130	-1.17	-0.068	3939	2196	2902	3068	0.018103	0.021988	P23	2	2496	-1.21	-0.084	b2247	b2247	putative racemase	Putative enzymes	putative enzyme; Not classified
725	806	-1.11	-0.046	628	554	766	591	0.003487	0.005802	M11	3	239	-1.66	-0.221	b2248	b2248	putative regulator	Putative regulatory proteins	putative regulator; Not classified
633	588	1.08	0.032	658	892	611	775	0.004572	0.004627	O22	1	3544	-1.01	-0.005	b2249	b2249	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3332	3758	-1.13	-0.052	6225	4609	3545	5417	0.031964	0.026866	J10	2	3545	1.19	0.075	b2250	b2250	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
563	496	1.13	0.052	630	500	530	565	0.003333	0.004013	C24	1	3546	-1.20	-0.081	yfaO	b2251	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2034	2206	-1.08	-0.035	2277	2510	2120	2393	0.014123	0.016062	F13	4	2643	-1.14	-0.056	ais	b2252	protein induced by aluminum	Putative factors	phenotype; Not classified
459	651	-1.30	-0.114	-205	662	555	229	0.001348	0.004206	C6	2	498	-1.40	-0.147	b2253	b2253	putative enzyme	Putative enzymes	putative enzyme; Not classified
1566	1507	1.04	0.017	1118	1371	1536	1245	0.007344	0.011642	B1	3	2497	-1.59	-0.200	b2254	b2254	putative sugar transferase	Putative enzymes	putative enzyme; Not classified
1053	534	1.97	0.295	1887	1193	793	1540	0.009087	0.006013	D1	3	2498	1.51	0.179	b2255	b2255	putative transformylase	Putative enzymes	putative enzyme; Not classified
692	755	-1.09	-0.038	472	468	723	470	0.002775	0.005481	E24	1	3547	-1.83	-0.262	b2256	b2256	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1637	1458	1.12	0.050	1319	1149	1547	1234	0.007281	0.011724	G24	1	3548	-1.61	-0.207	b2257	b2257	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1991	1773	1.12	0.050	2072	1654	1882	1863	0.010993	0.014261	J7	3	989	-1.30	-0.113	b2258	b2258	putative transport/receptor protein	Putative transport proteins	putative transport; Not classified
439	232	1.00	0.000	492	411	335	451	0.002663	0.002541	H10	1	1188	1.00	0.000	pmrD	b2259	polymyxin resistance protein B	Putative transport proteins	putative transport; Drug/analog sensitivity
4588	4475	1.03	0.011	5046	4323	4532	4685	0.027642	0.034340	J7	1	2333	-1.24	-0.094	menE	b2260	o-succinylbenzoate-CoA ligase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
1105	807	1.37	0.137	1639	1740	956	1689	0.009969	0.007244	L7	1	2334	1.38	0.139	menC	b2261	o-succinylbenzoyl-CoA synthase; conversion of chorismate to 2-o-succinylbenzoyl-CoA	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
969	925	1.05	0.021	1935	1780	947	1858	0.010961	0.007176	N7	1	2335	1.53	0.184	menB	b2262	dihydroxynaphtoic acid synthetase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
998	773	1.29	0.111	2250	2092	885	2171	0.012810	0.006709	F1	3	2499	1.91	0.281	yfbB	b2263	putative enzyme	Putative enzymes	putative enzyme; Not classified
277	294	-1.00	0.000	319	432	285	376	0.002216	0.002162	P7	1	2336	1.00	0.000	menD	b2264	2-oxoglutarate decarboxylase; SHCHC synthase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
493	369	1.00	0.000	256	222	431	239	0.001409	0.003267	B9	1	2337	-1.09	-0.037	menF	b2265	"isochorismate hydroxymutase 2, menaquinone biosynthesis"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
3558	2769	1.28	0.109	5349	3997	3164	4673	0.027574	0.023974	I24	1	3549	1.15	0.061	elaB	b2266	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1126	1144	-1.02	-0.007	1368	1034	1135	1201	0.007087	0.008601	K24	1	3550	-1.21	-0.084	elaA	b2267	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1326	989	1.34	0.127	2067	1987	1158	2027	0.011959	0.008774	M24	1	3551	1.36	0.135	elaC	b2268	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1034	478	2.07	0.316	1116	887	756	1002	0.005911	0.005729	H1	3	2500	1.03	0.014	elaD	b2269	putative sulfatase / phosphatase	Putative enzymes	putative enzyme; Not classified
453	536	-1.07	-0.030	680	614	495	647	0.003818	0.003748	O24	1	3552	1.02	0.008	yfbK	b2270	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
197	340	-1.00	0.000	797	658	268	727	0.004291	0.002032	G5	1	1556	1.43	0.155	yfbL	b2271	putative aminopeptidase	Putative enzymes	putative enzyme; Not classified
1297	1104	1.17	0.070	1377	1784	1201	1581	0.009326	0.009100	A2	2	3553	1.02	0.011	yfbM	b2272	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
483	687	-1.37	-0.138	1181	1159	585	1170	0.006903	0.004435	C2	2	3554	1.56	0.192	yfbN	b2273	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
105	66	1.00	0.000	353	506	85	430	0.002536	0.000645	E2	2	3555	1.00	0.000	b2274	b2274	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
404	458	-1.00	0.000	1025	833	431	929	0.005482	0.003266	G2	2	3556	1.68	0.225	b2275	b2275	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1346	888	1.52	0.181	1345	402	1117	873	0.005154	0.008464	B10	3	1377	-1.64	-0.215	nuoN	b2276	NADH dehydrogenase I chain N	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
519	518	1.00	0.000	762	817	518	790	0.004659	0.003928	D10	3	1378	1.19	0.074	nuoM	b2277	NADH dehydrogenase I chain M	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
591	513	1.15	0.061	882	623	552	752	0.004440	0.004184	F10	3	1379	1.06	0.026	nuoL	b2278	NADH dehydrogenase I chain L	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
301	214	1.00	0.000	411	154	257	283	0.001670	0.001949	H10	3	1380	-1.00	0.000	nuoK	b2279	NADH dehydrogenase I chain K	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
7694	5348	1.44	0.158	13898	12384	6521	13141	0.077542	0.049414	J10	3	1381	1.57	0.196	nuoJ	b2280	NADH dehydrogenase I chain J	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
2041	1959	1.04	0.018	1803	1496	2000	1649	0.009733	0.015156	L10	3	1382	-1.56	-0.192	nuoI	b2281	NADH dehydrogenase I chain I	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
2957	2785	1.06	0.026	2246	2110	2871	2178	0.012850	0.021756	N10	3	1383	-1.69	-0.229	nuoH	b2282	NADH dehydrogenase I chain H	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
7676	7174	1.07	0.029	7762	9222	7425	8492	0.050109	0.056265	P10	3	1384	-1.12	-0.050	nuoG	b2283	NADH dehydrogenase I chain G	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
2251	1183	1.90	0.279	3982	2369	1717	3176	0.018740	0.013013	B12	3	1385	1.44	0.158	nuoF	b2284	NADH dehydrogenase I chain F	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
1902	1282	1.48	0.171	2195	2606	1592	2400	0.014164	0.012066	D12	3	1386	1.17	0.070	nuoE	b2285	NADH dehydrogenase I chain E	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
6094	5954	1.02	0.010	16389	15707	6024	16048	0.094694	0.045648	I2	2	3557	2.07	0.317	nuoC	b2286	"NADH dehydrogenase I chain C, D"	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
4449	3580	1.24	0.094	2311	1547	4015	1929	0.011383	0.030421	F12	3	1387	-2.67	-0.427	nuoB	b2287	NADH dehydrogenase I chain B	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
2408	2047	1.18	0.070	2118	1787	2227	1952	0.011520	0.016879	H12	3	1388	-1.47	-0.166	nuoA	b2288	NADH dehydrogenase I chain A	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
318	119	1.00	0.000	1414	641	219	1027	0.006061	0.001656	J12	3	1389	2.02	0.305	lrhA	b2289	"NADH dehydrogenase transcriptional regulator, LysR family"	Regulatory function	"regulator; Energy metabolism, carbon: Aerobic respiration"
2893	2735	1.06	0.024	5585	4360	2814	4973	0.029342	0.021326	J1	3	2501	1.38	0.139	b2290	b2290	putative aminotransferase	Putative enzymes	putative enzyme; Not classified
206	171	1.00	0.000	521	649	188	585	0.003453	0.001428	A10	3	609	1.15	0.061	b2291	b2291	putative alpha helix protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
297	220	1.00	0.000	341	268	259	304	0.001795	0.001960	M19	4	367	-1.00	0.000	yfbS	b2292	putative transport protein	Putative transport proteins	putative transport; Not classified
2312	1570	1.47	0.168	4115	3982	1941	4049	0.023890	0.014705	L1	3	2502	1.62	0.211	yfbT	b2293	putative phosphatase	Putative enzymes	putative enzyme; Not classified
516	584	-1.13	-0.054	836	1252	550	1044	0.006161	0.004168	K2	2	3558	1.48	0.170	b2294	b2294	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
255	373	-1.00	0.000	-152	411	314	130	0.000764	0.002379	M2	2	3559	-1.00	0.000	b2295	b2295	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4549	3029	1.50	0.177	3352	3040	3789	3196	0.018860	0.028711	L12	3	1390	-1.52	-0.183	ackA	b2296	acetate kinase	Energy metabolism	"enzyme; Energy metabolism, carbon: Electron transport"
2295	2346	-1.02	-0.010	3541	3280	2321	3410	0.020124	0.017585	C13	1	50	1.14	0.059	pta	b2297	phosphotransacetylase	Energy metabolism	enzyme; Degradation of small molecules: Carbon compounds
1787	1470	1.22	0.085	2063	1017	1629	1540	0.009088	0.012340	N1	3	2503	-1.36	-0.133	yfcC	b2298	putative S-transferase	Putative enzymes	putative enzyme; Not classified
2514	2378	1.06	0.024	5240	4354	2446	4797	0.028308	0.018534	O11	3	240	1.53	0.184	b2299	b2299	putative regulator	Putative regulatory proteins	putative regulator; Not classified
765	658	1.16	0.066	1376	1068	711	1222	0.007211	0.005391	O2	2	3560	1.34	0.126	yfcE	b2300	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
957	1978	-2.07	-0.315	1354	1346	1468	1350	0.007967	0.011122	A4	2	3561	-1.40	-0.145	yfcF	b2301	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
988	618	1.60	0.204	893	686	803	789	0.004658	0.006083	I16	3	2173	-1.31	-0.116	yfcG	b2302	putative S-transferase	Putative enzymes	putative enzyme; Not classified
1153	991	1.16	0.066	1392	1379	1072	1386	0.008176	0.008122	D9	1	2338	1.01	0.003	folX	b2303	"D-erythro-7,8-dihydroneopterin tri P epimerase"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
12692	13582	-1.07	-0.029	19115	18815	13137	18965	0.111907	0.099548	F8	2	2504	1.12	0.051	b2304	b2304	putative sugar nucleotide epimerase	Putative enzymes	putative enzyme; Not classified
285	339	-1.00	0.000	273	699	312	486	0.002870	0.002366	C4	2	3562	1.00	0.000	yfcI	b2305	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
405	489	-1.00	0.000	429	373	447	401	0.002367	0.003387	K24	4	766	-1.13	-0.053	hisP	b2306	ATP-binding component of histidine transport	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
530	799	-1.51	-0.178	180	341	664	261	0.001539	0.005032	M24	4	767	-1.68	-0.225	hisM	b2307	"histidine transport, membrane protein M"	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
515	373	1.03	0.013	520	324	444	422	0.002490	0.003364	K16	3	2174	-1.12	-0.050	hisQ	b2308	histidine transport system permease protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
2015	2021	-1.00	-0.001	1704	1737	2018	1720	0.010152	0.015289	O24	4	768	-1.51	-0.178	hisJ	b2309	histidine-binding periplasmic protein of high-affinity histidine transport system	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
941	730	1.29	0.110	1350	1053	836	1201	0.007089	0.006332	B1	1	769	1.12	0.049	argT	b2310	"lysine-, arginine-, ornithine-binding periplasmic protein"	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
5036	5260	-1.04	-0.019	9732	7611	5148	8672	0.051169	0.039010	F9	1	2339	1.31	0.118	ubiX	b2311	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	Putative enzymes	putative enzyme; Not classified
3143	3358	-1.07	-0.029	3242	2826	3251	3034	0.017901	0.024632	K24	1	2014	-1.38	-0.139	purF	b2312	amidophosphoribosyltransferase = PRPP amidotransferase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
692	655	1.06	0.024	536	322	673	429	0.002530	0.005101	O19	4	368	-1.70	-0.231	cvpA	b2313	membrane protein required for colicin V production	Cell processes	membrane; Colicin-related functions
320	589	-1.18	-0.071	805	1128	454	966	0.005703	0.003442	E4	2	3563	1.66	0.219	dedD	b2314	putative lipoprotein	putative membrane protein	putative membrane; Not classified
5960	6889	-1.16	-0.063	14496	10319	6424	12408	0.073213	0.048683	H9	1	2340	1.50	0.177	folC	b2315	dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Folic acid"
11496	11392	1.01	0.004	10935	12394	11444	11665	0.068830	0.086722	A14	2	2065	-1.26	-0.100	accD	b2316	"acetylCoA carboxylase, carboxytransferase component, beta subunit"	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
2471	3029	-1.23	-0.088	2478	2638	2750	2558	0.015093	0.020839	G4	2	3564	-1.38	-0.140	dedA	b2317	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5151	5123	1.01	0.002	5148	5577	5137	5362	0.031641	0.038928	I1	3	1733	-1.23	-0.090	truA	b2318	pseudouridylate synthase I	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
1769	1585	1.12	0.048	3767	3794	1677	3780	0.022306	0.012710	J10	1	1189	1.76	0.244	usg	b2319	putative PTS system enzyme II A component	Putative transport proteins	putative transport; Not classified
1323	1345	-1.02	-0.007	1887	2191	1334	2039	0.012032	0.010110	J9	1	2341	1.19	0.076	pdxB	b2320	erythronate-4-phosphate dehyrogenase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridoxine"
1152	1328	-1.15	-0.062	2020	1942	1240	1981	0.011690	0.009393	L10	1	1190	1.24	0.095	div	b2321	cell division protein	Cell processes	factor; Cell division
1536	1577	-1.03	-0.011	2155	1902	1557	2029	0.011970	0.011798	L7	3	990	1.01	0.006	b2322	b2322	putative transport protein	Putative transport proteins	putative transport; Not classified
2429	2620	-1.08	-0.033	2911	3611	2525	3261	0.019241	0.019131	C14	2	2066	1.01	0.002	fabB	b2323	3-oxoacyl-[acyl-carrier-protein] synthase I	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
7971	7714	1.03	0.014	12373	11167	7842	11770	0.069451	0.059427	B3	3	2505	1.17	0.068	b2324	b2324	putative peptidase	Putative enzymes	putative enzyme; Not classified
2385	2396	-1.00	-0.002	2449	3081	2390	2765	0.016316	0.018114	I4	2	3565	-1.11	-0.045	b2325	b2325	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
792	180	1.58	0.200	1400	995	486	1198	0.007067	0.003682	A13	3	241	1.92	0.283	b2326	b2326	putative transporting ATPase	Putative enzymes	putative enzyme; Not classified
516	517	-1.00	-0.001	442	579	516	510	0.003011	0.003913	C10	3	610	-1.30	-0.114	yfcA	b2327	putative structural protein	Putative cell structure	putative structure; Not classified
1317	1540	-1.17	-0.068	1206	1723	1429	1464	0.008641	0.010825	E6	2	499	-1.25	-0.098	mepA	b2328	"murein DD-endopeptidase, penicillin-insensitive"	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
1578	1472	1.07	0.030	1910	2492	1525	2201	0.012986	0.011554	I21	4	1909	1.12	0.051	aroC	b2329	chorismate synthase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Chorismate
3940	3530	1.12	0.048	26701	25954	3735	26328	0.155352	0.028306	D3	3	2506	5.49	0.739	yfcB	b2330	putative adenine-specific methylase	Putative enzymes	putative enzyme; Not classified
722	1274	-1.76	-0.247	1063	1350	998	1207	0.007120	0.007560	K4	2	3566	-1.06	-0.026	b2331	b2331	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
749	678	1.10	0.043	718	687	714	703	0.004146	0.005407	M4	2	3567	-1.30	-0.115	b2332	b2332	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
33	125	-1.00	0.000	180	400	79	290	0.001714	0.000598	G6	2	500	1.00	0.000	b2333	b2333	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
532	898	-1.69	-0.227	816	1231	715	1024	0.006039	0.005416	O4	2	3568	1.12	0.047	b2334	b2334	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
185	194	-1.00	0.000	421	543	189	482	0.002844	0.001436	I6	2	501	1.00	0.000	b2335	b2335	putative fimbrial protein	Putative cell structure	putative structure; Not classified
2085	2439	-1.17	-0.068	3264	4379	2262	3822	0.022551	0.017139	J2	2	1253	1.32	0.119	yfcS	b2336	putative chaperone	Putative factors	putative factor; Not classified
144	247	-1.00	0.000	248	470	196	359	0.002116	0.001483	A6	2	3569	1.00	0.000	b2337	b2337	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
11948	11016	1.08	0.035	20006	16281	11482	18144	0.107060	0.087010	E10	3	611	1.23	0.090	yfcU	b2338	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
-9	209	-1.00	0.000	-112	173	100	30	0.000180	0.000758	K6	2	502	-1.00	0.000	b2339	b2339	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
150	287	-1.00	0.000	268	89	218	179	0.001055	0.001654	C6	2	3570	-1.00	0.000	b2340	b2340	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
627	935	-1.49	-0.174	1380	1958	781	1669	0.009850	0.005919	E14	2	2067	1.66	0.221	b2341	b2341	putative enzyme	Putative enzymes	putative enzyme; Not classified
703	484	1.41	0.148	870	667	593	768	0.004534	0.004497	M16	3	2175	1.01	0.004	b2342	b2342	putative acyltransferase	Putative enzymes	putative enzyme; Not classified
360	308	1.00	0.000	680	710	334	695	0.004100	0.002530	E6	2	3571	1.37	0.136	b2343	b2343	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
526	581	-1.10	-0.043	585	559	553	572	0.003377	0.004191	D1	1	770	-1.24	-0.094	fadL	b2344	transport of long-chain fatty acids; sensitivity to phage T2	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
537	789	-1.47	-0.167	361	928	663	644	0.003802	0.005022	G6	2	3572	-1.32	-0.121	b2345	b2345	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
741	467	1.48	0.171	1300	1053	604	1177	0.006942	0.004575	A4	3	585	1.52	0.181	vacJ	b2346	lipoprotein precursor	Cell structure	"membrane; Macromolecule synthesis, modification: Lipoprotein"
963	853	1.13	0.052	1661	1346	908	1503	0.008871	0.006881	N7	3	991	1.29	0.110	yfdC	b2347	putative transport	Putative transport proteins	putative transport; Not classified
4818	4659	1.03	0.015	9600	8657	4739	9128	0.053864	0.035909	A21	4	369	1.50	0.176	intC	b2349	putative prophage Sf6-like integrase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Not classified"
1195	789	1.51	0.180	487	713	992	600	0.003538	0.007517	I6	2	3573	-2.12	-0.327	b2350	b2350	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
611	797	-1.30	-0.115	910	1104	704	1007	0.005941	0.005335	M6	2	503	1.11	0.047	b2351	b2351	putative glycan biosynthesis enzyme	Putative enzymes	putative enzyme; Not classified
344	513	-1.03	-0.011	411	587	428	499	0.002943	0.003247	K6	2	3574	-1.08	-0.034	b2352	b2352	putative ligase	Putative enzymes	putative enzyme; Not classified
11638	12031	-1.03	-0.014	15753	13732	11835	14742	0.086991	0.089681	M6	2	3575	-1.03	-0.013	b2353	b2353	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3727	4613	-1.24	-0.093	4924	5294	4170	5109	0.030147	0.031600	O6	2	3576	-1.05	-0.020	b2354	b2354	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1016	802	1.27	0.103	603	452	909	528	0.003115	0.006888	F3	3	2507	-2.21	-0.345	yfdL	b2355	putative RNA polymerase beta	Putative enzymes	putative enzyme; Not classified
148	117	1.00	0.000	220	205	132	212	0.001253	0.001003	A8	2	3577	1.00	0.000	yfdM	b2356	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4680	5408	-1.16	-0.063	6547	7594	5044	7071	0.041721	0.038223	C8	2	3578	1.09	0.038	yfdN	b2357	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2836	3422	-1.21	-0.082	3283	3201	3129	3242	0.019132	0.023712	E8	2	3579	-1.24	-0.093	yfdO	b2358	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
583	501	1.16	0.066	973	857	542	915	0.005398	0.004108	G8	2	3580	1.31	0.119	b2359	b2359	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
145	374	-1.00	0.000	376	314	259	345	0.002036	0.001966	I8	2	3581	1.00	0.000	b2360	b2360	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
395	413	-1.00	0.000	451	447	404	449	0.002650	0.003061	K8	2	3582	-1.02	-0.009	b2361	b2361	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2521	3140	-1.25	-0.095	8170	7264	2830	7717	0.045536	0.021449	M8	2	3583	2.12	0.327	b2362	b2362	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3	445	-1.00	0.000	98	397	224	247	0.001459	0.001699	O8	2	3584	-1.00	0.000	b2363	b2363	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
192	357	-1.00	0.000	549	392	275	471	0.002778	0.002081	K21	4	1910	1.00	0.000	dsdC	b2364	D-serine dehydratase (deaminase) transcriptional activator	Regulatory function	regulator; Degradation of small molecules: Amino acids
1396	1244	1.12	0.050	1274	1455	1320	1364	0.008051	0.010002	P7	3	992	-1.24	-0.094	dsdX	b2365	transport system permease (serine?)	Putative transport proteins	transport; Not classified
974	970	1.00	0.002	977	1311	972	1144	0.006749	0.007363	M21	4	1911	-1.09	-0.038	dsdA	b2366	D-serine dehydratase (deaminase)	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
339	371	-1.00	0.000	532	475	355	504	0.002973	0.002690	N10	1	1191	1.00	0.000	emrY	b2367	multidrug resistance protein Y	Putative transport proteins	putative transport; Drug/analog sensitivity
470	252	1.00	0.000	213	565	361	389	0.002293	0.002735	P10	1	1192	-1.00	0.000	emrK	b2368	multidrug resistance protein K	Putative transport proteins	putative transport; Drug/analog sensitivity
568	1317	-2.32	-0.365	3124	4662	942	3893	0.022969	0.007142	G1	2	1636	3.22	0.507	evgA	b2369	putative positive transcription regulator (sensor EvgS)	Putative regulatory proteins	putative regulator; Not classified
0	62	-1.00	0.000	62	188	31	125	0.000737	0.000235	I1	2	1637	1.00	0.000	evgS	b2370	putative sensor for regulator EvgA	Putative regulatory proteins	putative regulator; Not classified
605	875	-1.45	-0.161	881	1055	740	968	0.005710	0.005608	A10	2	3585	1.02	0.008	yfdE	b2371	putative enzyme	Putative enzymes	putative enzyme; Not classified
589	436	1.18	0.071	1041	866	513	953	0.005625	0.003885	B9	3	993	1.45	0.161	b2372	b2372	putative receptor protein	Putative factors	putative factor; Not classified
1864	1697	1.10	0.041	10377	7122	1780	8749	0.051626	0.013492	H3	3	2508	3.83	0.583	b2373	b2373	putative enzyme	Putative enzymes	putative enzyme; Not classified
2506	2520	-1.01	-0.002	2135	2800	2513	2467	0.014558	0.019045	C10	2	3586	-1.31	-0.117	b2374	b2374	putative enzyme	Putative enzymes	putative enzyme; Not classified
1009	1087	-1.08	-0.032	1305	1234	1048	1269	0.007489	0.007943	E10	2	3587	-1.06	-0.026	b2375	b2375	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
378	341	1.00	0.000	249	190	359	219	0.001295	0.002723	G10	2	3588	-1.00	0.000	b2376	b2376	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
22874	21879	1.05	0.019	37158	30950	22376	34054	0.200943	0.169562	I10	2	3589	1.19	0.074	b2377	b2377	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
574	513	1.12	0.048	968	836	544	902	0.005322	0.004119	K10	2	3590	1.29	0.111	ddg	b2378	putative heat shock protein	Putative factors	putative factor; Not classified
1048	989	1.06	0.025	1010	1050	1019	1030	0.006076	0.007718	O16	3	2176	-1.27	-0.104	b2379	b2379	putative aminotransferase	Putative enzymes	putative enzyme; Not classified
469	278	1.00	0.000	1233	1119	374	1176	0.006941	0.002831	C13	3	242	2.31	0.364	b2380	b2380	putative sensor protein	Putative regulatory proteins	putative regulator; Not classified
88	164	-1.00	0.000	178	369	126	273	0.001612	0.000954	M10	2	3591	1.00	0.000	b2381	b2381	putative 2-component transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
362	274	1.00	0.000	786	525	318	656	0.003871	0.002413	E13	3	243	1.29	0.111	b2382	b2382	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
3925	3788	1.04	0.015	3136	2644	3856	2890	0.017055	0.029222	A18	3	2177	-1.71	-0.234	b2383	b2383	"putative PTS system enzyme IIA component, enzyme I"	Putative transport proteins	putative transport; Not classified
1968	732	2.69	0.429	911	1005	1350	958	0.005653	0.010230	O10	2	3592	-1.81	-0.258	b2384	b2384	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3908	3000	1.30	0.115	5045	4691	3454	4868	0.028726	0.026171	K1	3	1734	1.10	0.040	b2385	b2385	putative peptidase	Putative enzymes	putative enzyme; Not classified
293	263	1.00	0.000	503	619	278	561	0.003310	0.002107	A12	2	3593	1.10	0.043	b2386	b2386	putative transport protein	Putative transport proteins	putative transport; Not classified
221	205	1.00	0.000	397	243	213	320	0.001887	0.001613	F1	1	771	1.00	0.000	b2387	b2387	putative PTS system enzyme IIB component	Putative transport proteins	putative transport; Not classified
762	760	1.00	0.001	1696	1305	761	1500	0.008853	0.005769	E13	1	51	1.53	0.186	glk	b2388	glucokinase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
5169	5428	-1.05	-0.021	5366	5362	5298	5364	0.031651	0.040148	C12	2	3594	-1.27	-0.103	b2389	b2389	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1543	1116	1.38	0.141	1210	1122	1330	1166	0.006879	0.010075	E12	2	3595	-1.46	-0.166	b2390	b2390	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
147	295	-1.00	0.000	312	331	221	322	0.001897	0.001676	G12	2	3596	1.00	0.000	b2391	b2391	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
40699	38632	1.05	0.023	39222	48555	39666	43888	0.258970	0.300577	I12	2	3597	-1.16	-0.065	b2392	b2392	putative transport system permease	Putative transport proteins	putative transport; Not classified
817	722	1.13	0.054	959	1276	770	1117	0.006594	0.005832	H1	1	772	1.13	0.053	nupC	b2393	permease of transport system for 3 nucleosides	Transport and binding proteins	"transport; Transport of small molecules: Nucleosides, purines, pyrimidines"
2235	2114	1.06	0.024	1382	1673	2174	1528	0.009013	0.016477	C21	4	370	-1.83	-0.262	yi81_3	b2394	IS186 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1194	1429	-1.20	-0.078	1067	826	1311	947	0.005586	0.009937	K12	2	3598	-1.78	-0.250	yfeA	b2395	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
128	315	-1.00	0.000	160	302	222	231	0.001363	0.001679	M12	2	3599	-1.00	0.000	yfeC	b2398	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
103	292	-1.00	0.000	168	233	198	201	0.001184	0.001497	O12	2	3600	-1.00	0.000	yfeD	b2399	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1996	1545	1.29	0.111	2427	2416	1770	2421	0.014287	0.013415	M1	3	1735	1.06	0.027	gltX	b2400	"glutamate tRNA synthetase, catalytic subunit"	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
1233	1060	1.16	0.066	1343	945	1147	1144	0.006751	0.008691	C18	3	2178	-1.29	-0.110	xapR	b2405	regulator for xapA	Regulatory function	regulator; Central intermediary metabolism: Nucleotide interconversions
1037	1111	-1.07	-0.030	1547	1651	1074	1599	0.009434	0.008139	J1	1	773	1.16	0.064	xapB	b2406	xanthosine permease	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
755	569	1.33	0.123	1076	514	662	795	0.004691	0.005016	E18	3	2179	-1.07	-0.029	xapA	b2407	xanthosine phosphorylase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Nucleotide interconversions
455	204	1.00	0.000	239	252	330	245	0.001447	0.002498	J3	3	2509	-1.00	0.000	yfeN	b2408	putative sugar hydrolase	Putative enzymes	putative enzyme; Not classified
716	689	1.04	0.017	713	634	702	674	0.003974	0.005322	G13	3	244	-1.34	-0.127	yfeR	b2409	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
1112	801	1.39	0.142	1136	1189	957	1163	0.006860	0.007250	L3	3	2510	-1.06	-0.024	yfeH	b2410	putative cytochrome oxidase	Putative enzymes	putative enzyme; Not classified
841	471	1.68	0.226	2382	1919	656	2150	0.012689	0.004968	I5	1	1557	2.55	0.407	lig	b2411	DNA ligase	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
2422	2278	1.06	0.027	5112	3897	2350	4504	0.026578	0.017807	I13	3	245	1.49	0.174	zipA	b2412	cell division protein involved in FtsZ ring	Cell processes	membrane; Cell division
770	731	1.05	0.023	756	753	750	755	0.004453	0.005686	G18	3	2180	-1.28	-0.106	cysZ	b2413	required for sulfate transport	Transport and binding proteins	transport; Transport of small molecules: Anions
13035	10829	1.20	0.081	14429	11610	11932	13019	0.076823	0.090418	O21	4	1912	-1.18	-0.071	cysK	b2414	"cysteine synthase A, O-acetylserine sulfhydrolase A"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Cysteine
1995	1692	1.18	0.071	9920	11842	1843	10881	0.064207	0.013969	L1	1	774	4.60	0.662	ptsH	b2415	PTS system protein HPr	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2608	2515	1.04	0.016	9217	9026	2561	9122	0.053824	0.019410	N1	1	775	2.77	0.443	ptsI	b2416	PEP-protein phosphotransferase system enzyme I	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1655	1780	-1.08	-0.031	4245	3819	1718	4032	0.023789	0.013015	B4	2	776	1.83	0.262	crr	b2417	"PTS system, glucose-specific IIA component"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
378	220	1.00	0.000	422	226	299	324	0.001910	0.002265	N3	3	2511	-1.00	0.000	pdxK	b2418	pyridoxal/pyridoxine/pyridoxamine kinase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridoxine"
5809	5040	1.15	0.062	7537	7238	5425	7387	0.043590	0.041106	A14	2	3601	1.06	0.025	yfeK	b2419	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
647	565	1.14	0.059	835	944	606	889	0.005246	0.004593	C14	2	3602	1.14	0.058	b2420	b2420	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2592	2418	1.07	0.030	1901	1761	2505	1831	0.010803	0.018983	A23	4	1913	-1.76	-0.245	cysM	b2421	"cysteine synthase B, O-acetylserine sulfhydrolase B"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Cysteine
792	652	1.21	0.084	1059	929	722	994	0.005865	0.005471	B3	1	777	1.07	0.030	cysA	b2422	ATP-binding component of sulfate permease A protein; chromate resistance	Transport and binding proteins	transport; Transport of small molecules: Anions
7587	7020	1.08	0.034	13336	13146	7303	13241	0.078129	0.055341	D3	1	778	1.41	0.150	cysW	b2423	sulfate transport system permease W protein	Transport and binding proteins	transport; Transport of small molecules: Anions
4249	4072	1.04	0.018	4034	4399	4161	4216	0.024879	0.031529	F3	1	779	-1.27	-0.103	cysU	b2424	"sulfate, thiosulfate transport system permease T protein"	Transport and binding proteins	transport; Transport of small molecules: Anions
1895	1745	1.09	0.036	2103	2162	1820	2132	0.012583	0.013792	H3	1	780	-1.10	-0.040	cysP	b2425	thiosulfate binding protein	Transport and binding proteins	transport; Transport of small molecules: Anions
540	541	-1.00	0.000	802	630	541	716	0.004227	0.004097	P3	3	2512	1.03	0.014	ucpA	b2426	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
877	1133	-1.29	-0.111	1359	1334	1005	1346	0.007944	0.007617	E14	2	3603	1.04	0.018	yfeT	b2427	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
471	414	1.00	0.000	390	279	443	334	0.001972	0.003354	K13	3	246	-1.12	-0.048	yfeU	b2428	putative regulator	Putative regulatory proteins	putative regulator; Not classified
3650	3384	1.08	0.033	3761	2961	3517	3361	0.019832	0.026650	B5	3	2513	-1.34	-0.128	b2429	b2429	putative PTS enzyme II	Putative enzymes	putative enzyme; Not classified
1100	1259	-1.14	-0.059	1164	1223	1179	1194	0.007043	0.008938	E21	4	371	-1.27	-0.103	b2430	b2430	putative beta-lactamase	Putative enzymes	putative enzyme; Not classified
413	1001	-2.00	-0.301	685	1311	707	998	0.005890	0.005358	G14	2	3604	1.10	0.041	b2431	b2431	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
484	619	-1.24	-0.093	481	342	551	412	0.002429	0.004177	I14	2	3605	-1.39	-0.144	b2432	b2432	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
670	808	-1.21	-0.081	1024	966	739	995	0.005869	0.005598	K14	2	3606	1.05	0.020	b2433	b2433	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
296	343	-1.00	0.000	445	887	320	666	0.003931	0.002422	M14	2	3607	1.31	0.117	b2434	b2434	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
256	174	1.00	0.000	58	268	215	163	0.000961	0.001631	O6	2	504	-1.00	0.000	amiA	b2435	N-acetylmuramoyl-l-alanine amidase I	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
1159	852	1.36	0.134	1337	993	1006	1165	0.006874	0.007620	L9	1	2342	-1.11	-0.045	hemF	b2436	coproporphyrinogen III oxidase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
12555	12350	1.02	0.007	15883	17596	12452	16739	0.098775	0.094362	O14	2	3608	1.05	0.020	yfeG	b2437	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
143	-51	1.00	0.000	51	80	46	65	0.000384	0.000348	G10	3	612	1.00	0.000	b2438	b2438	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1311	1525	-1.16	-0.066	1562	1561	1418	1561	0.009214	0.010743	A16	2	3609	-1.17	-0.067	b2439	b2439	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1156	994	1.16	0.065	1693	1769	1075	1731	0.010214	0.008148	G13	1	52	1.25	0.098	eutC	b2440	"ethanolamine ammonia-lyase, light chain"	Central intermediary metabolism	enzyme; Degradation of small molecules: Amines
936	909	1.03	0.013	1474	1543	923	1509	0.008902	0.006993	I13	1	53	1.27	0.105	eutB	b2441	"ethanolamine ammonia-lyase, heavy chain"	Central intermediary metabolism	enzyme; Degradation of small molecules: Amines
2059	1473	1.40	0.145	1020	1560	1766	1290	0.007613	0.013385	G21	4	372	-1.76	-0.245	b2442	b2442	putative prophage integrase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Not classified"
267	395	-1.00	0.000	500	339	331	419	0.002473	0.002509	C16	2	3610	-1.00	0.000	b2443	b2443	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
52	33	1.00	0.000	99	194	43	147	0.000866	0.000325	E16	2	3611	1.00	0.000	b2444	b2444	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-346	-5	-1.00	0.000	-77	21	-175	-28	-0.000165	-0.001330	G16	2	3612	1.00	0.000	b2445	b2445	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
258	390	-1.00	0.000	792	627	324	710	0.004187	0.002457	I16	2	3613	1.40	0.145	b2446	b2446	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7293	6697	1.09	0.037	10957	11166	6995	11061	0.065270	0.053007	K16	2	3614	1.23	0.090	b2447	b2447	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
300	297	1.00	0.000	582	644	299	613	0.003619	0.002264	M16	2	3615	1.21	0.081	b2448	b2448	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
929	881	1.05	0.023	2029	1829	905	1929	0.011383	0.006856	O16	2	3616	1.66	0.220	b2449	b2449	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1704	1960	-1.15	-0.061	1882	2716	1832	2299	0.013564	0.013883	A18	2	3617	-1.02	-0.010	b2450	b2450	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1183	1594	-1.35	-0.129	2899	3982	1389	3441	0.020301	0.010523	C18	2	3618	1.93	0.285	b2451	b2451	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2204	2074	1.06	0.026	2655	2147	2139	2401	0.014168	0.016208	K13	1	54	-1.14	-0.058	eutH	b2452	ethanolamine utilization; homolog of Salmonella putative transport protein	Putative transport proteins	putative transport; Degradation of small molecules: Amines
392	426	-1.00	0.000	968	858	409	913	0.005386	0.003100	M13	1	55	1.74	0.240	eutG	b2453	"ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase"	Carbon compound catabolism	putative enzyme; Degradation of small molecules: Amines
3482	3100	1.12	0.050	5204	3730	3291	4467	0.026357	0.024940	O13	1	56	1.06	0.024	eutJ	b2454	ethanolamine utilization; homolog of Salmonella gene	Carbon compound catabolism	putative enzyme; Degradation of small molecules: Amines
1374	1417	-1.03	-0.013	3579	3304	1395	3441	0.020306	0.010574	A15	1	57	1.92	0.283	eutE	b2455	ethanolamine utilization; similar to acetaldehyde dehydrogenase	Carbon compound catabolism	putative enzyme; Degradation of small molecules: Amines
246	233	1.00	0.000	238	220	239	229	0.001352	0.001815	E18	2	3619	-1.00	0.000	cchB	b2456	detox protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
1371	1498	-1.09	-0.039	4046	3614	1434	3830	0.022598	0.010870	G18	2	3620	2.08	0.318	cchA	b2457	detox protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
299	362	-1.00	0.000	1088	690	330	889	0.005247	0.002501	C15	1	58	1.75	0.243	eutI	b2458	ethanolamine utilization; homolog of Salmonella acetyl/butyryl P transferase	Carbon compound catabolism	putative enzyme; Degradation of small molecules: Amines
8588	7986	1.08	0.032	21731	18422	8287	20077	0.118466	0.062797	I18	2	3621	1.89	0.276	b2459	b2459	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4229	3650	1.16	0.064	4888	3877	3939	4383	0.025862	0.029852	K18	2	3622	-1.15	-0.062	b2460	b2460	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
651	927	-1.42	-0.154	1784	1915	789	1849	0.010912	0.005980	M18	2	3623	1.82	0.261	b2461	b2461	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1281	1356	-1.06	-0.025	2844	3161	1319	3002	0.017715	0.009992	O18	2	3624	1.77	0.249	b2462	b2462	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3422	3238	1.06	0.024	3562	4433	3330	3998	0.023589	0.025234	I18	3	2181	-1.07	-0.029	b2463	b2463	putative multimodular enzyme	Putative enzymes	putative enzyme; Not classified
1720	1447	1.19	0.075	1892	1451	1583	1671	0.009863	0.011997	K18	3	2182	-1.22	-0.085	talA	b2464	transaldolase A	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway"
4492	4128	1.09	0.037	5726	6074	4310	5900	0.034814	0.032658	N12	3	1391	1.07	0.028	tktB	b2465	transketolase 2 isozyme	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway"
3311	3261	1.02	0.007	4214	5033	3286	4624	0.027282	0.024902	A20	2	3625	1.10	0.040	b2466	b2466	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
556	594	-1.07	-0.028	623	941	575	782	0.004615	0.004357	C20	2	3626	1.06	0.025	yffH	b2467	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
763	944	-1.24	-0.092	1492	1835	854	1663	0.009815	0.006470	C23	4	1914	1.52	0.181	yffG	b2468	"putative oxidoreductase, Fe-S subunit"	Putative enzymes	putative enzyme; Not classified
6162	5909	1.04	0.018	6451	6352	6035	6402	0.037773	0.045732	P12	3	1392	-1.21	-0.083	narQ	b2469	"sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL)"	Regulatory function	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
1698	2232	-1.31	-0.119	4978	4942	1965	4960	0.029266	0.014893	B12	1	1193	1.97	0.293	acrD	b2470	"sensitivity to acriflavine, integral membrane protein, possible efflux pump"	Putative transport proteins	putative transport; Drug/analog sensitivity
401	405	-1.00	0.000	152	353	403	253	0.001491	0.003054	E20	2	3627	-1.02	-0.008	yffB	b2471	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
789	884	-1.12	-0.049	1181	1431	836	1306	0.007705	0.006338	E23	4	1915	1.22	0.085	dapE	b2472	N-succinyl-diaminopimelate deacylase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Lysine
615	491	1.23	0.090	570	561	553	566	0.003339	0.004189	G20	2	3628	-1.25	-0.098	ypfH	b2473	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2458	2234	1.10	0.042	3915	4062	2346	3988	0.023534	0.017778	I20	2	3629	1.32	0.122	ypfI	b2474	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2042	2536	-1.24	-0.094	5051	4721	2289	4886	0.028829	0.017347	K20	2	3630	1.66	0.221	b2475	b2475	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
20397	20729	-1.02	-0.007	30560	31988	20563	31274	0.184539	0.155824	M24	1	2015	1.18	0.073	purC	b2476	phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
698	285	1.40	0.145	2443	1751	491	2097	0.012374	0.003721	C4	3	586	3.33	0.522	nlpB	b2477	lipoprotein-34	Cell structure	"membrane; Macromolecule synthesis, modification: Lipoprotein"
2169	2547	-1.17	-0.070	2517	2612	2358	2564	0.015130	0.017866	G23	4	1916	-1.18	-0.072	dapA	b2478	dihydrodipicolinate synthase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Lysine
2173	1449	1.50	0.176	1806	1174	1811	1490	0.008793	0.013725	M18	3	2183	-1.56	-0.193	gcvR	b2479	transcriptional regulation of gcv operon	Regulatory function	"regulator; Central intermediary metabolism: Pool, multipurpose conversions"
4960	4836	1.03	0.011	11782	11618	4898	11700	0.069040	0.037114	J3	1	781	1.86	0.270	bcp	b2480	bacterioferritin comigratory protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
441	118	1.00	0.000	500	407	280	454	0.002676	0.002120	B14	3	1393	1.00	0.000	hyfA	b2481	hydrogenase 4 Fe-S subunit	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Anaerobic respiration"
2629	3308	-1.26	-0.100	6884	9916	2968	8400	0.049567	0.022492	D14	3	1394	2.20	0.343	hyfB	b2482	hydrogenase 4 membrane subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
404	-112	1.00	0.000	541	-124	146	208	0.001229	0.001108	F14	3	1395	1.00	0.000	hyfC	b2483	hydrogenase 4 membrane subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
3684	2982	1.24	0.092	4190	2650	3333	3420	0.020178	0.025255	O18	3	2184	-1.25	-0.097	hyfD	b2484	hydrogenase 4 membrane subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
3711	3261	1.14	0.056	4750	4479	3486	4615	0.027229	0.026416	M20	2	3631	1.03	0.013	hyfE	b2485	hydrogenase 4 membrane subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
947	438	1.89	0.277	920	270	693	595	0.003510	0.005250	H14	3	1396	-1.50	-0.175	hyfF	b2486	hydrogenase 4 membrane subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
2175	1902	1.14	0.058	1799	1474	2038	1636	0.009656	0.015447	J14	3	1397	-1.60	-0.204	hyfG	b2487	hydrogenase 4 subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
6463	6076	1.06	0.027	8364	7728	6269	8046	0.047477	0.047508	L14	3	1398	-1.00	0.000	hyfH	b2488	hydrogenase 4 Fe-S subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
2085	1648	1.27	0.102	5498	5527	1867	5512	0.032527	0.014147	N14	3	1399	2.30	0.362	hyfI	b2489	hydrogenase 4 Fe-S subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
655	614	1.07	0.028	629	582	634	606	0.003575	0.004808	O1	3	1736	-1.34	-0.129	b2490	b2490	putative protein processing element	Putative factors	putative factor; Not classified
3731	3459	1.08	0.033	3397	2751	3595	3074	0.018138	0.027242	A20	3	2185	-1.50	-0.177	hyfR	b2491	"putative 2-component regulator, interaction with sigma 54"	Putative regulatory proteins	putative regulator; Not classified
304	122	1.00	0.000	649	515	213	582	0.003433	0.001612	D9	3	994	1.14	0.059	focB	b2492	probable formate transporter (formate channel 2)	Putative transport proteins	"putative transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
3022	3275	-1.08	-0.035	6744	6315	3148	6530	0.038530	0.023857	O20	2	3632	1.62	0.208	perM	b2493	putative permease	Putative transport proteins	putative transport; Not classified
1604	2273	-1.42	-0.151	4410	4567	1939	4488	0.026485	0.014690	A22	2	3633	1.80	0.256	b2494	b2494	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2338	1852	1.26	0.101	9656	7712	2095	8684	0.051240	0.015876	D5	3	2514	3.23	0.509	b2495	b2495	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
604	514	1.18	0.070	767	716	559	741	0.004374	0.004234	K5	1	1558	1.03	0.014	b2496	b2496	putative DNA replication factor	Putative factors	putative factor; Not classified
1687	1955	-1.16	-0.064	2207	2106	1821	2157	0.012725	0.013799	L3	1	782	-1.08	-0.035	uraA	b2497	uracil transport	Transport and binding proteins	"transport; Transport of small molecules: Nucleosides, purines, pyrimidines"
11903	12524	-1.05	-0.022	3870	3494	12213	3682	0.021724	0.092548	O24	1	2016	-4.26	-0.629	upp	b2498	uracil phosphoribosyltransferase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
9057	7817	1.16	0.064	8657	7267	8437	7962	0.046980	0.063932	A2	2	2017	-1.36	-0.134	purM	b2499	phosphoribosylaminoimidazole synthetase = AIR synthetase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
833	1088	-1.31	-0.116	379	931	961	655	0.003866	0.007279	C2	2	2018	-1.88	-0.275	purN	b2500	phosphoribosylglycinamide formyltransferase 1	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
1644	1437	1.14	0.059	1521	1331	1540	1426	0.008414	0.011672	C20	3	2186	-1.39	-0.142	ppk	b2501	polyphosphate kinase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Phosphorus compounds
1171	743	1.58	0.198	1665	835	957	1250	0.007375	0.007252	E20	3	2187	1.02	0.007	ppx	b2502	exopolyphosphatase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Phosphorus compounds
5281	5225	1.01	0.005	10838	8898	5253	9868	0.058228	0.039804	C22	2	3634	1.46	0.165	b2503	b2503	putative cytochrome C-type biogenesis protein	Putative enzymes	putative enzyme; Not classified
928	910	1.02	0.008	532	781	919	656	0.003872	0.006961	E22	2	3635	-1.80	-0.255	b2504	b2504	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
39	166	-1.00	0.000	-28	335	102	154	0.000906	0.000776	A8	2	505	1.00	0.000	b2505	b2505	putative outer membrane lipoprotein	putative membrane protein	putative membrane; Not classified
296	251	1.00	0.000	498	455	273	477	0.002813	0.002071	I10	3	613	1.00	0.000	b2506	b2506	putative membrane protein	putative membrane protein	putative membrane; Not classified
5365	3903	1.37	0.138	8665	9964	4634	9315	0.054964	0.035116	E2	2	2019	1.57	0.195	guaA	b2507	GMP synthetase (glutamine-hydrolyzing)	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
1002	1154	-1.15	-0.062	1629	2189	1078	1909	0.011265	0.008169	G2	2	2020	1.38	0.140	guaB	b2508	IMP dehydrogenase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
273	388	-1.00	0.000	393	681	331	537	0.003170	0.002505	K1	2	1638	1.06	0.024	xseA	b2509	"exonuclease VII, large subunit"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
213	285	-1.00	0.000	272	349	249	311	0.001835	0.001886	G22	2	3636	-1.00	0.000	b2510	b2510	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1361	1466	-1.08	-0.032	3358	2795	1414	3077	0.018154	0.010713	F5	3	2515	1.69	0.229	b2511	b2511	putative GTP-binding factor	Putative factors	putative factor; Not classified
742	1050	-1.42	-0.151	1237	1384	896	1311	0.007734	0.006787	H5	3	2516	1.14	0.057	b2512	b2512	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
646	936	-1.45	-0.161	1088	1060	791	1074	0.006337	0.005993	I22	2	3637	1.06	0.024	b2513	b2513	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2159	1921	1.12	0.051	5036	3846	2040	4441	0.026207	0.015456	A3	3	1737	1.70	0.229	hisS	b2514	histidine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
1966	2293	-1.17	-0.067	2370	3147	2130	2758	0.016275	0.016138	K22	2	3638	1.01	0.004	gcpE	b2515	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1105	1468	-1.33	-0.123	2124	2881	1287	2502	0.014765	0.009751	C8	2	506	1.51	0.180	yfgA	b2516	putative membrane protein	putative membrane protein	putative membrane; Not classified
795	486	1.59	0.201	1399	628	640	1013	0.005979	0.004853	J5	3	2517	1.23	0.091	yfgB	b2517	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
723	780	-1.08	-0.033	847	1147	752	997	0.005884	0.005695	I2	2	2021	1.03	0.014	ndk	b2518	nucleoside diphosphate kinase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
883	926	-1.05	-0.021	1470	1738	905	1604	0.009467	0.006855	E8	2	507	1.38	0.140	pbpC	b2519	putative peptidoglycan enzyme	Putative enzymes	putative enzyme; Not classified
353	372	-1.00	0.000	387	523	363	455	0.002684	0.002749	M22	2	3639	-1.00	0.000	b2520	b2520	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1083	615	1.76	0.246	1164	833	849	998	0.005891	0.006435	G20	3	2188	-1.09	-0.038	sseA	b2521	putative thiosulfate sulfurtransferase	Putative enzymes	putative enzyme; Not classified
5200	5358	-1.03	-0.013	5420	4661	5279	5040	0.029741	0.040001	H13	4	2644	-1.34	-0.129	sseB	b2522	enhanced serine sensitivity	Putative factors	phenotype; Not classified
664	307	1.33	0.123	643	410	486	526	0.003107	0.003680	I20	3	2189	-1.18	-0.074	pepB	b2523	putative peptidase	Putative enzymes	putative enzyme; Not classified
6218	6364	-1.02	-0.010	12875	10750	6291	11813	0.069704	0.047670	O22	2	3640	1.46	0.165	yfhJ	b2524	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2019	1731	1.17	0.067	5021	5160	1875	5090	0.030035	0.014209	P14	3	1400	2.11	0.325	fdx	b2525	"[2FE-2S] ferredoxin, electron carrer protein"	Energy metabolism	"carrier; Energy metabolism, carbon: Electron transport"
5179	4680	1.11	0.044	11270	9516	4930	10393	0.061327	0.037355	D12	1	1194	1.64	0.215	hscA	b2526	"heat shock protein, chaperone, member of Hsp70 protein family"	Cell processes	factor; Chaperones
1103	957	1.15	0.061	709	602	1030	655	0.003866	0.007806	L10	2	3641	-2.02	-0.305	yfhE	b2527	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1513	1501	1.01	0.003	2195	2146	1507	2171	0.012808	0.011419	C24	2	3642	1.12	0.050	yfhF	b2528	putative regulator	Putative regulatory proteins	putative regulator; Not classified
1790	1995	-1.11	-0.047	3589	921	1892	2255	0.013307	0.014338	E24	2	3643	-1.08	-0.032	b2529	b2529	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3037	3034	1.00	0.000	3007	2286	3036	2647	0.015617	0.023003	K20	3	2190	-1.47	-0.168	yfhO	b2530	putative aminotransferase	Putative enzymes	putative enzyme; Not classified
2268	3075	-1.36	-0.132	1787	1373	2672	1580	0.009322	0.020247	G24	2	3644	-2.17	-0.337	b2531	b2531	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
358	300	1.00	0.000	650	235	329	442	0.002610	0.002491	L5	3	2518	1.00	0.000	b2532	b2532	putative ATP synthase beta subunit	Putative enzymes	putative enzyme; Not classified
266	356	-1.00	0.000	207	271	311	239	0.001411	0.002358	C13	2	146	-1.00	0.000	suhB	b2533	"enhances synthesis of sigma32 in mutant; extragenic suppressor, may modulate RNAse III lethal action"	Cell processes	phenotype; Global regulatory functions
473	348	1.00	0.000	555	519	411	537	0.003167	0.003112	N5	3	2519	1.02	0.008	b2534	b2534	putative enzyme (3.4.-)	Putative enzymes	putative enzyme; Not classified
2688	3479	-1.29	-0.112	1834	2154	3084	1994	0.011767	0.023369	I24	2	3645	-1.99	-0.298	csiE	b2535	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
791	525	1.51	0.178	514	580	658	547	0.003229	0.004988	M20	3	2191	-1.54	-0.189	hcaT	b2536	MFS (major facilitator superfamily) transporter	Transport and binding proteins	transport; Degradation of small molecules: Carbon compounds
540	460	1.08	0.033	763	685	500	724	0.004272	0.003787	M13	3	247	1.13	0.052	hcaR	b2537	transcriptional activator of hca cluster	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
1473	1352	1.09	0.037	1511	1352	1413	1432	0.008447	0.010705	O20	3	2192	-1.27	-0.103	hcaA1	b2538	large terminal subunit of phenylpropionate dioxygenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1460	1108	1.32	0.120	1527	1225	1284	1376	0.008118	0.009732	A22	3	2193	-1.20	-0.079	hcaA2	b2539	small terminal subunit of phenylpropionate dioxygenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
861	781	1.10	0.042	980	474	821	727	0.004289	0.006222	C22	3	2194	-1.45	-0.162	hcaC	b2540	ferredoxin subunit of phenylpropionate dioxygenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1065	1118	-1.05	-0.021	1557	1298	1091	1427	0.008423	0.008269	P5	3	2520	1.02	0.008	hcaB	b2541	"2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase"	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
475	433	1.00	0.000	788	693	454	740	0.004369	0.003437	B7	3	2521	1.27	0.104	hcaD	b2542	ferredoxin reductase subunit of phenylpropionate dioxygenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
178	275	-1.00	0.000	321	551	227	436	0.002570	0.001718	K24	2	3646	1.00	0.000	yphA	b2543	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1403	1738	-1.24	-0.093	1994	2135	1571	2065	0.012183	0.011902	M24	2	3647	1.02	0.010	yphB	b2544	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
407	528	-1.06	-0.024	801	618	467	709	0.004186	0.003541	D7	3	2522	1.18	0.073	yphC	b2545	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
633	329	1.27	0.102	1500	1191	481	1345	0.007939	0.003647	F9	3	995	2.18	0.338	yphD	b2546	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
377	356	1.00	0.000	884	702	366	793	0.004681	0.002777	H9	3	996	1.56	0.193	yphE	b2547	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
694	708	-1.02	-0.009	1980	1750	701	1865	0.011004	0.005313	O24	2	3648	2.07	0.316	yphF	b2548	putative LACI-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
9751	9463	1.03	0.013	15685	15228	9607	15457	0.091206	0.072800	A2	3	3649	1.25	0.098	yphG	b2549	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1566	1387	1.13	0.053	4030	3523	1477	3776	0.022284	0.011189	E15	1	59	1.99	0.299	yphH	b2550	putative NAGC-like transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
6783	8336	-1.23	-0.090	14510	14641	7559	14575	0.086004	0.057283	I23	4	1917	1.50	0.176	glyA	b2551	serine hydroxymethyltransferase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Glycine
893	1032	-1.16	-0.063	2334	1991	963	2162	0.012759	0.007295	B16	3	1401	1.75	0.243	hmpA	b2552	"dihydropteridine reductase, ferrisiderophore reductase activity"	Energy metabolism	"enzyme; Energy metabolism, carbon: Electron transport"
8242	7668	1.07	0.031	14843	14719	7955	14781	0.087218	0.060282	K23	4	1918	1.45	0.160	glnB	b2553	regulatory protein P-II for glutamine synthetase	Regulatory function	regulator; Amino acid biosynthesis: Glutamine
1399	1042	1.34	0.128	1258	1003	1221	1131	0.006672	0.009251	E22	3	2195	-1.39	-0.142	yfhA	b2554	putative 2-component transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
2489	2226	1.12	0.049	1475	1558	2358	1516	0.008947	0.017865	K10	3	614	-2.00	-0.300	yfhG	b2555	putative alpha helix protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
1763	1890	-1.07	-0.030	1509	1274	1826	1392	0.008212	0.013841	O13	3	248	-1.69	-0.227	yfhK	b2556	putative 2-component sensor protein	Putative regulatory proteins	putative regulator; Not classified
8269	8565	-1.04	-0.015	18885	17617	8417	18251	0.107693	0.063780	K2	2	2022	1.69	0.228	purL	b2557	phosphoribosylformyl-glycineamide synthetase = FGAM synthetase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
1322	1289	1.03	0.011	512	297	1305	404	0.002386	0.009892	F7	3	2523	-3.30	-0.518	yfhD	b2558	putative periplasmic binding transport protein	Putative transport proteins	putative transport; Not classified
356	442	-1.00	0.000	597	389	399	493	0.002909	0.003023	H7	3	2524	-1.01	-0.003	yfhC	b2559	putative deaminase	Putative enzymes	putative enzyme; Not classified
854	715	1.19	0.077	1707	1720	784	1713	0.010109	0.005943	C2	3	3650	1.70	0.231	yfhB	b2560	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1144	1242	-1.09	-0.036	2213	2309	1193	2261	0.013343	0.009043	E2	3	3651	1.48	0.169	yfhH	b2561	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3137	2928	1.07	0.030	6084	6266	3032	6175	0.036438	0.022978	G2	3	3652	1.59	0.200	yfhL	b2562	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1265	1325	-1.05	-0.020	1131	1219	1295	1175	0.006932	0.009814	G14	2	2068	-1.42	-0.151	acpS	b2563	CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
1277	1302	-1.02	-0.009	1985	1896	1289	1940	0.011450	0.009771	N9	1	2343	1.17	0.069	pdxJ	b2564	pyridoxine biosynthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridoxine"
661	701	-1.06	-0.025	1010	775	681	893	0.005269	0.005159	M5	1	1559	1.02	0.009	recO	b2565	protein interacts with RecR and possibly RecF proteins	Regulatory function	"regulator; DNA - replication, repair, restriction/modification"
1413	1422	-1.01	-0.003	746	821	1418	783	0.004622	0.010742	E13	2	147	-2.32	-0.366	era	b2566	GTP-binding protein	Regulatory function	factor; Global regulatory functions
975	925	1.05	0.023	1092	793	950	943	0.005562	0.007199	O5	1	1560	-1.29	-0.112	rnc	b2567	"RNase III, ds RNA"	"Transcription, RNA processing and degradation"	enzyme; Degradation of RNA
658	742	-1.13	-0.052	2807	2690	700	2749	0.016218	0.005304	N3	1	783	3.06	0.485	lepB	b2568	leader peptidase (signal peptidase I)	Cell processes	"enzyme; Protein, peptide secretion"
5371	4238	1.27	0.103	5868	4977	4805	5422	0.031995	0.036408	C3	3	1738	-1.14	-0.056	lepA	b2569	"GTP-binding elongation factor, may be inner membrane protein"	"Translation, post-translational modification"	factor; Proteins - translation and modification
-34	-38	1.00	0.000	-79	102	-36	11	0.000067	-0.000272	G13	2	148	1.00	0.000	rseC	b2570	"sigma-E factor, negative regulatory protein"	Regulatory function	regulator; Global regulatory functions
28	56	-1.00	0.000	-135	-3	42	-69	-0.000407	0.000316	I13	2	149	-1.00	0.000	rseB	b2571	regulates activity of sigma-E factor	Regulatory function	regulator; Global regulatory functions
1780	2116	-1.19	-0.075	3589	3870	1948	3729	0.022005	0.014761	K13	2	150	1.49	0.173	rseA	b2572	"sigma-E factor, negative regulatory protein"	Regulatory function	regulator; Global regulatory functions
1016	1144	-1.13	-0.052	1089	1614	1080	1352	0.007976	0.008184	M13	2	151	-1.03	-0.011	rpoE	b2573	"RNA polymerase, sigma-E factor; heat shock and oxidative stress"	Regulatory function	regulator; Global regulatory functions
2228	1789	1.25	0.095	962	939	2008	950	0.005608	0.015217	P9	1	2344	-2.71	-0.434	nadB	b2574	"quinolinate synthetase, B protein"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide"
1727	1462	1.18	0.072	2600	1591	1595	2095	0.012364	0.012084	I2	3	3653	1.02	0.010	yfiC	b2575	putative enzyme	Putative enzymes	putative enzyme; Not classified
7361	6522	1.13	0.053	11588	12397	6941	11992	0.070763	0.052600	M1	2	1639	1.35	0.129	srmB	b2576	ATP-dependent RNA helicase	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
425	273	1.00	0.000	1076	435	349	755	0.004457	0.002644	A15	3	249	1.49	0.172	yfiE	b2577	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
206	129	1.00	0.000	239	115	167	177	0.001045	0.001268	K2	3	3654	-1.00	0.000	yfiK	b2578	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
807	874	-1.08	-0.034	907	935	840	921	0.005435	0.006368	D16	3	1402	-1.17	-0.069	yfiD	b2579	putative formate acetyltransferase	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Anaerobic respiration"
1227	987	1.24	0.095	1087	1112	1107	1099	0.006487	0.008390	A7	1	1561	-1.29	-0.112	ung	b2580	uracil-DNA-glycosylase	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1150	1104	1.04	0.018	1770	1814	1127	1792	0.010576	0.008540	M2	3	3655	1.24	0.093	yfiF	b2581	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3115	2534	1.23	0.090	3863	3627	2824	3745	0.022099	0.021402	F16	3	1403	1.03	0.014	trxC	b2582	putative thioredoxin-like protein	Putative enzymes	putative enzyme; Not classified
642	624	1.03	0.012	755	781	633	768	0.004532	0.004798	O2	3	3656	-1.06	-0.025	yfiP	b2583	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
25119	19379	1.30	0.113	16273	14053	22249	15163	0.089474	0.168595	A4	3	3657	-1.88	-0.275	yfiQ	b2584	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1378	1779	-1.29	-0.111	973	1463	1579	1218	0.007189	0.011964	I14	2	2069	-1.66	-0.221	pssA	b2585	phosphatidylserine synthase; phospholipid synthesis	Fatty acid and phospholipid metabolism	"enzyme; Macromolecule synthesis, modification: Phospholipids"
1752	1356	1.29	0.111	3451	3561	1554	3506	0.020688	0.011775	C4	3	3658	1.76	0.245	yfiM	b2586	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5364	6247	-1.16	-0.066	20547	19128	5806	19838	0.117057	0.043993	P3	1	784	2.66	0.425	kgtP	b2587	alpha-ketoglutarate permease	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
9108	9515	-1.04	-0.019	10448	9597	9312	10022	0.059139	0.070563	E3	3	1739	-1.19	-0.077	clpB	b2592	heat shock protein	Cell processes	"putative enzyme; Degradation of proteins, peptides, glyco"
657	858	-1.31	-0.116	1246	822	758	1034	0.006100	0.005741	E4	3	3659	1.06	0.026	yfiH	b2593	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1052	962	1.09	0.039	1949	874	1007	1412	0.008330	0.007628	J7	3	2525	1.09	0.038	sfhB	b2594	suppressor of ftsH mutation	Cell processes	phenotype; Not classified
3230	2116	1.53	0.184	5826	3685	2673	4755	0.028059	0.020255	G4	3	3660	1.39	0.142	b2595	b2595	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
99	134	-1.00	0.000	93	62	117	78	0.000458	0.000884	I4	3	3661	-1.00	0.000	b2596	b2596	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4038	3168	1.27	0.105	4010	3901	3603	3956	0.023342	0.027301	O1	2	1640	-1.17	-0.068	yfiA	b2597	putative yhbH sigma 54 modulator	Putative regulatory proteins	putative regulator; Not classified
24	77	-1.00	0.000	78	119	50	98	0.000580	0.000382	M23	4	1919	1.00	0.000	pheL	b2598	leader peptide of chorismate mutase-P-prephenate dehydratase	Amino acid biosynthesis	leader; Amino acid biosynthesis: Phenylalanine
2557	2792	-1.09	-0.038	3611	3910	2674	3760	0.022189	0.020264	O23	4	1920	1.09	0.039	pheA	b2599	chorismate mutase-P and prephenate dehydratase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Phenylalanine
1334	1521	-1.14	-0.057	9935	8584	1428	9260	0.054638	0.010820	A2	1	1921	5.05	0.703	tyrA	b2600	chorismate mutase-T and prephenate dehydrogenase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Tyrosine
1819	2158	-1.19	-0.074	11655	10336	1988	10996	0.064883	0.015067	C2	1	1922	4.31	0.634	aroF	b2601	"3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible)"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Tyrosine
281	229	1.00	0.000	253	528	255	391	0.002305	0.001931	K4	3	3662	1.00	0.000	yfiL	b2602	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
602	642	-1.07	-0.028	523	467	622	495	0.002921	0.004715	M4	3	3663	-1.57	-0.196	b2603	b2603	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
879	708	1.24	0.094	1713	1527	794	1620	0.009558	0.006013	O4	3	3664	1.59	0.201	yfiN	b2604	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
936	1083	-1.16	-0.063	1001	661	1010	831	0.004904	0.007652	M10	3	615	-1.56	-0.193	yfiB	b2605	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
9441	6924	1.36	0.135	7543	8005	8182	7774	0.045874	0.062004	G3	3	1740	-1.35	-0.131	rplS	b2606	50S ribosomal subunit protein L19	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
15679	14945	1.05	0.021	20488	18220	15312	19354	0.114202	0.116028	I3	3	1741	-1.02	-0.007	trmD	b2607	tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
2859	3023	-1.06	-0.024	2434	2420	2941	2427	0.014320	0.022286	A6	3	3665	-1.56	-0.192	yfjA	b2608	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6402	5411	1.18	0.073	6805	7828	5907	7317	0.043173	0.044759	K3	3	1742	-1.04	-0.016	rpsP	b2609	30S ribosomal subunit protein S16	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
987	1094	-1.11	-0.045	2975	2107	1041	2541	0.014995	0.007887	B5	1	785	1.90	0.279	ffh	b2610	"GTP-binding export factor binds to signal sequence, GTP and RNA"	Transport and binding proteins	"transport; Protein, peptide secretion"
755	449	1.51	0.179	501	544	602	523	0.003086	0.004561	C6	3	3666	-1.48	-0.170	b2611	b2611	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
352	308	1.00	0.000	400	272	330	336	0.001981	0.002502	E6	3	3667	-1.00	0.000	ypjE	b2612	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2534	2814	-1.11	-0.046	3320	3314	2674	3317	0.019575	0.020263	G6	3	3668	-1.04	-0.015	yfjD	b2613	putative transport protein	Putative transport proteins	putative transport; Not classified
2161	2951	-1.37	-0.135	2401	2872	2556	2636	0.015555	0.019366	I21	4	373	-1.24	-0.095	grpE	b2614	phage lambda replication; host DNA synthesis; heat shock protein; protein repair	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
603	532	1.13	0.054	338	267	568	302	0.001785	0.004301	I6	3	3669	-1.43	-0.156	yfjB	b2615	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
521	643	-1.23	-0.091	365	715	582	540	0.003185	0.004412	C7	1	1562	-1.39	-0.142	recN	b2616	protein used in recombination and DNA repair	"DNA replication, repair, restriction/modification"	"putative enzyme; DNA - replication, repair, restriction/modification"
371	466	-1.00	0.000	1060	1472	419	1266	0.007471	0.003173	G8	2	508	2.35	0.372	smpA	b2617	small membrane protein A	"Hypothetical, unclassified, unknown"	orf; Inner membrane
703	640	1.10	0.041	1239	1178	672	1208	0.007130	0.005090	K6	3	3670	1.40	0.146	b2618	b2618	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1950	1928	1.01	0.005	2489	1998	1939	2243	0.013237	0.014692	M6	3	3671	-1.11	-0.045	b2619	b2619	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1057	341	2.11	0.325	1125	1021	699	1073	0.006332	0.005296	O6	3	3672	1.20	0.078	smpB	b2620	small protein B	"Hypothetical, unclassified, unknown"	orf; Unknown function
837	1231	-1.47	-0.167	620	797	1034	709	0.004181	0.007836	K21	4	374	-1.87	-0.273	intA	b2622	prophage CP4-57 integrase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
494	566	-1.13	-0.054	737	957	530	847	0.004997	0.004014	E7	1	1563	1.24	0.095	yfjH	b2623	putative histone	Putative factors	putative factor; Not classified
248	252	-1.00	0.000	-8	74	250	33	0.000195	0.001894	M21	4	375	-1.00	0.000	alpA	b2624	prophage CP4-57 regulatory protein alpA	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
566	761	-1.34	-0.129	1092	1137	663	1114	0.006574	0.005026	A8	3	3673	1.31	0.117	yfjI	b2625	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
872	1144	-1.31	-0.118	679	604	1008	641	0.003785	0.007636	C8	3	3674	-2.02	-0.305	yfjJ	b2626	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2437	2247	1.08	0.035	2741	2604	2342	2672	0.015767	0.017747	E8	3	3675	-1.13	-0.051	yfjK	b2627	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
957	927	1.03	0.014	1060	982	942	1021	0.006024	0.007137	G8	3	3676	-1.18	-0.074	yfjL	b2628	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1379	821	1.68	0.225	1745	1237	1100	1491	0.008798	0.008336	I8	3	3677	1.06	0.023	yfjM	b2629	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
772	675	1.14	0.058	874	907	724	890	0.005254	0.005483	F12	1	1195	-1.04	-0.018	yfjN	b2630	putative cell division protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
384	331	1.00	0.000	405	343	358	374	0.002205	0.002710	K8	3	3678	-1.00	0.000	yfjO	b2631	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1505	1440	1.05	0.019	1725	1817	1472	1771	0.010449	0.011158	M8	3	3679	-1.07	-0.028	yfjP	b2632	putative GTP-binding protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
173	223	-1.00	0.000	220	370	198	295	0.001740	0.001502	O21	4	376	1.00	0.000	yfjQ	b2633	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1694	1877	-1.11	-0.044	2190	2549	1785	2370	0.013982	0.013530	O8	3	3680	1.03	0.014	yfjR	b2634	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
819	515	1.59	0.201	317	296	667	306	0.001808	0.005056	A10	3	3681	-1.69	-0.227	b2635	b2635	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
253	-180	1.00	0.000	196	9	36	103	0.000606	0.000277	C10	3	3682	1.00	0.000	b2636	b2636	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1340	1504	-1.12	-0.050	2504	2499	1422	2501	0.014759	0.010776	E10	3	3683	1.37	0.137	yfjT	b2637	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
107	131	-1.00	0.000	162	50	119	106	0.000625	0.000900	G10	3	3684	-1.00	0.000	b2638	b2638	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
805	566	1.42	0.153	1063	938	685	1000	0.005902	0.005193	H12	1	1196	1.14	0.056	b2639	b2639	putative pump protein	Putative transport proteins	putative transport; Not classified
205	281	-1.00	0.000	342	1370	243	856	0.005050	0.001843	I10	3	3685	1.68	0.226	b2640	b2640	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
14	-24	1.00	0.000	-53	34	-5	-10	-0.000057	-0.000039	K10	3	3686	-1.00	0.000	b2641	b2641	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1024	829	1.24	0.092	1131	650	926	890	0.005254	0.007018	M10	3	3687	-1.34	-0.126	yfjW	b2642	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
109	201	-1.00	0.000	129	149	155	139	0.000821	0.001177	O10	3	3688	-1.00	0.000	yfjX	b2643	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
333	501	-1.00	-0.001	770	351	417	560	0.003305	0.003163	G7	1	1564	1.05	0.019	yfjY	b2644	putative DNA repair protein	Putative enzymes	putative enzyme; Not classified
428	363	1.00	0.000	443	360	395	402	0.002372	0.002997	A12	3	3689	-1.00	0.000	yfjZ	b2645	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
72	86	-1.00	0.000	250	-162	79	44	0.000259	0.000599	C12	3	3690	-1.00	0.000	ypjF	b2646	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
420	4	1.00	0.000	936	955	212	945	0.005579	0.001604	M3	3	1743	1.86	0.269	ypjA	b2647	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
9	-36	1.00	0.000	89	68	-13	79	0.000464	-0.000101	E12	3	3691	1.00	0.000	b2648	b2648	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
101	130	-1.00	0.000	121	54	116	88	0.000518	0.000876	G12	3	3692	-1.00	0.000	b2649	b2649	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
532	303	1.06	0.027	569	402	417	485	0.002864	0.003162	I12	3	3693	-1.05	-0.023	b2650	b2650	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-6	21	-1.00	0.000	-47	-77	8	-62	-0.000366	0.000059	K12	3	3694	-1.00	0.000	b2651	b2651	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
169	422	-1.00	0.000	358	410	295	384	0.002266	0.002237	M12	3	3695	1.00	0.000	b2653	b2653	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1064	952	1.12	0.048	483	373	1008	428	0.002526	0.007639	O12	3	3696	-2.55	-0.406	b2654	b2654	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1086	839	1.29	0.112	1230	827	963	1028	0.006069	0.007294	A14	3	3697	-1.20	-0.080	b2655	b2655	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
328	198	1.00	0.000	751	595	263	673	0.003974	0.001992	C14	3	3698	1.32	0.122	b2656	b2656	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3595	3553	1.01	0.005	5732	5723	3574	5727	0.033795	0.027080	L7	3	2526	1.25	0.096	b2657	b2657	putative enzyme	Putative enzymes	putative enzyme; Not classified
279	276	1.00	0.000	-22	69	278	24	0.000139	0.002104	E14	3	3699	-1.00	0.000	b2658	b2658	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1427	1424	1.00	0.001	2100	933	1425	1516	0.008948	0.010801	G14	3	3700	-1.21	-0.082	b2659	b2659	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1255	1415	-1.13	-0.052	1255	926	1335	1090	0.006434	0.010114	I14	3	3701	-1.57	-0.196	ygaF	b2660	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1551	1499	1.03	0.015	1897	1677	1525	1787	0.010546	0.011558	G22	3	2196	-1.10	-0.040	gabD	b2661	"succinate-semialdehyde dehydrogenase, NADP-dependent activity"	Carbon compound catabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
867	609	1.42	0.153	1067	881	738	974	0.005747	0.005595	I22	3	2197	1.03	0.012	gabT	b2662	4-aminobutyrate aminotransferase activity	Carbon compound catabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
511	520	-1.02	-0.008	896	794	515	845	0.004988	0.003905	D5	1	786	1.28	0.106	gabP	b2663	transport permease protein of gamma-aminobutyrate	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2500	2237	1.12	0.048	5499	4597	2368	5048	0.029788	0.017948	C15	3	250	1.66	0.220	ygaE	b2664	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
2044	1759	1.16	0.065	3840	2297	1902	3069	0.018108	0.014409	K14	3	3702	1.26	0.099	ygaU	b2665	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1175	760	1.55	0.189	1749	1261	967	1505	0.008879	0.007329	M14	3	3703	1.21	0.083	b2666	b2666	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1028	939	1.10	0.040	1689	959	983	1324	0.007813	0.007452	O14	3	3704	1.05	0.020	b2667	b2667	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
550	495	1.10	0.041	613	483	522	548	0.003232	0.003957	N7	3	2527	-1.22	-0.088	ygaP	b2668	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1040	1075	-1.03	-0.014	1885	1595	1057	1740	0.010267	0.008013	I7	1	1565	1.28	0.108	stpA	b2669	DNA-binding protein; H-NS-like protein; chaperone activity; RNA splicing?	Regulatory function	"regulator; Basic proteins - synthesis, modification"
682	459	1.36	0.135	963	670	571	817	0.004818	0.004324	A16	3	3705	1.11	0.047	b2670	b2670	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
538	434	1.08	0.032	1071	770	486	920	0.005431	0.003683	C16	3	3706	1.47	0.169	ygaC	b2671	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1244	926	1.34	0.128	1590	1568	1085	1579	0.009318	0.008222	E16	3	3707	1.13	0.054	ygaM	b2672	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3538	3355	1.05	0.023	5302	4782	3446	5042	0.029751	0.026115	G16	3	3708	1.14	0.057	nrdH	b2673	glutaredoxin-like protein; hydrogen donor	Nucleotide biosynthesis and metabolism	"enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione"
3891	4070	-1.05	-0.020	7037	6823	3980	6930	0.040892	0.030161	I16	3	3709	1.36	0.132	nrdI	b2674	"orf, hypothetical protein"	Nucleotide biosynthesis and metabolism	phenotype; Unknown
2234	2075	1.08	0.032	2639	2557	2154	2598	0.015331	0.016325	K22	3	2198	-1.06	-0.027	nrdE	b2675	"ribonucleoside-diphosphate reductase 2, alpha subunit"	Nucleotide biosynthesis and metabolism	enzyme; Central intermediary metabolism: Nucleotide interconversions
1338	1178	1.14	0.055	1768	1725	1258	1746	0.010305	0.009530	M22	3	2199	1.08	0.034	nrdF	b2676	"ribonucleoside-diphosphate reductase 2, beta chain, frag"	Nucleotide biosynthesis and metabolism	enzyme; Central intermediary metabolism: Nucleotide interconversions
14168	13248	1.07	0.029	26978	21721	13708	24349	0.143679	0.103877	F5	1	787	1.38	0.141	proV	b2677	"ATP-binding component of transport system for glycine, betaine and proline"	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
683	413	1.37	0.136	727	804	548	765	0.004517	0.004154	H5	1	788	1.09	0.036	proW	b2678	high-affinity transport system for glycine betaine and proline	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
486	363	1.00	0.000	844	838	425	841	0.004962	0.003217	J12	1	1197	1.54	0.188	proX	b2679	high-affinity transport system for glycine betaine and proline	Transport and binding proteins	transport; Osmotic adaptation
2468	1596	1.55	0.189	3736	2937	2032	3337	0.019688	0.015395	K16	3	3710	1.28	0.107	b2680	b2680	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1434	1139	1.26	0.100	3587	3172	1287	3379	0.019940	0.009750	J9	3	997	2.05	0.311	b2681	b2681	putative transport protein	Putative transport proteins	putative transport; Not classified
2527	2580	-1.02	-0.009	2722	3140	2554	2931	0.017294	0.019351	M16	3	3711	-1.12	-0.049	b2682	b2682	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1191	1348	-1.13	-0.054	1047	954	1269	1000	0.005903	0.009619	O16	3	3712	-1.63	-0.212	ygaH	b2683	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1219	1246	-1.02	-0.009	924	1037	1233	980	0.005784	0.009340	A23	4	377	-1.61	-0.208	emrR	b2684	regulator of plasmid mcrB operon (microcin B17 synthesis)	Regulatory function	regulator; Plasmid-related functions
178	286	-1.00	0.000	334	280	232	307	0.001812	0.001759	L12	1	1198	1.00	0.000	emrA	b2685	multidrug resistance secretion protein	Cell processes	transport; Drug/analog sensitivity
1749	2195	-1.26	-0.099	3127	3110	1972	3118	0.018400	0.014945	N12	1	1199	1.23	0.090	emrB	b2686	multidrug resistance; probably membrane translocase	Putative transport proteins	putative transport; Drug/analog sensitivity
2888	3051	-1.06	-0.024	5734	5877	2970	5806	0.034258	0.022504	A18	3	3713	1.52	0.183	ygaG	b2687	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
66783	71707	-1.07	-0.031	42211	32617	69245	37414	0.220767	0.524722	B11	1	2345	-2.38	-0.376	gshA	b2688	gamma-glutamate-cysteine ligase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione"
1504	1184	1.27	0.104	1891	1507	1344	1699	0.010026	0.010185	C18	3	3714	-1.02	-0.007	b2689	b2689	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2543	2619	-1.03	-0.013	2266	1475	2581	1870	0.011036	0.019561	E18	3	3715	-1.77	-0.249	yqaB	b2690	putative phosphatase	Putative enzymes	putative enzyme; Not classified
828	911	-1.10	-0.042	2662	3839	870	3251	0.019181	0.006589	O13	2	152	2.91	0.464	csrA	b2696	"carbon storage regulator; controls glycogen synthesis, gluconeogenesis, cell size and surface properties"	Regulatory function	regulator; Global regulatory functions
11303	14216	-1.26	-0.100	14370	11413	12760	12891	0.076068	0.096689	O3	3	1744	-1.27	-0.104	alaS	b2697	alanyl-tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
133	77	1.00	0.000	504	467	105	485	0.002865	0.000796	E15	3	251	1.00	0.000	oraA	b2698	"regulator, OraA protein"	Putative regulatory proteins	putative regulator; Not classified
2042	1951	1.05	0.020	1895	1575	1997	1735	0.010237	0.015131	K7	1	1566	-1.48	-0.170	recA	b2699	"DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
3197	2585	1.24	0.092	4233	3859	2891	4046	0.023872	0.021908	G18	3	3716	1.09	0.037	ygaD	b2700	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
988	1116	-1.13	-0.053	1337	1674	1052	1505	0.008883	0.007971	I8	2	509	1.11	0.047	mltB	b2701	membrane-bound lytic murein transglycosylase B	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
2305	3009	-1.31	-0.116	7959	6578	2657	7268	0.042889	0.020135	J5	1	789	2.13	0.328	srlA	b2702	"PTS system, glucitol/sorbitol-specific IIC component, one of two"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
90	304	-1.00	0.000	482	510	197	496	0.002927	0.001491	L5	1	790	1.00	0.000	srlE	b2703	"PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
104	62	1.00	0.000	101	128	83	115	0.000676	0.000627	N5	1	791	1.00	0.000	srlB	b2704	"PTS system, glucitol/sorbitol-specific enzyme IIA component"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
3351	3352	-1.00	0.000	7237	6789	3351	7013	0.041381	0.025394	G15	1	60	1.63	0.212	srlD	b2705	glucitol (sorbitol)-6-phosphate dehydrogenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
284	374	-1.00	0.000	784	648	329	716	0.004227	0.002492	I15	1	61	1.41	0.149	gutM	b2706	glucitol operon activator	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
1429	1609	-1.13	-0.051	3426	3203	1519	3314	0.019556	0.011509	K15	1	62	1.70	0.230	srlR	b2707	"regulator for gut (srl), glucitol operon"	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
464	332	1.00	0.000	612	732	398	672	0.003966	0.003017	M15	1	63	1.31	0.119	gutQ	b2708	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
850	561	1.52	0.181	2664	2559	705	2612	0.015411	0.005345	G15	3	252	2.88	0.460	ygaA	b2709	putative 2-component transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1739	1545	1.13	0.051	2700	2439	1642	2570	0.015164	0.012443	P7	3	2528	1.22	0.086	b2710	b2710	putative flavodoxin	Putative enzymes	putative enzyme; Not classified
1449	1192	1.22	0.085	1754	1242	1321	1498	0.008840	0.010007	B9	3	2529	-1.13	-0.054	ygbD	b2711	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
15100	14010	1.08	0.033	27953	31692	14555	29822	0.175973	0.110296	I15	3	253	1.60	0.203	hypF	b2712	transcriptional regulatory protein	Regulatory function	"regulator; Energy metabolism, carbon: Anaerobic respiration"
661	576	1.15	0.059	739	548	618	643	0.003797	0.004686	H16	3	1404	-1.23	-0.091	hydN	b2713	"involved in electron transport from formate to hydrogen, Fe-S centers"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
1031	1081	-1.05	-0.021	2213	2404	1056	2308	0.013620	0.008003	O15	1	64	1.70	0.231	ascG	b2714	ascBF operon repressor	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
1681	1127	1.49	0.174	1107	1080	1404	1094	0.006454	0.010642	P5	1	792	-1.65	-0.217	ascF	b2715	"PTS system enzyme II ABC (asc), cryptic, transports specific beta-glucosides"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
569	561	1.01	0.006	915	970	565	942	0.005560	0.004278	A17	1	65	1.30	0.114	ascB	b2716	6-phospho-beta-glucosidase; cryptic	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
4537	4310	1.05	0.022	3472	3188	4423	3330	0.019649	0.033519	I18	3	3717	-1.71	-0.232	hycI	b2717	protease involved in processing C-terminal end of the large subunit of hydrogenase 3	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
2652	2505	1.06	0.025	2994	2556	2578	2775	0.016376	0.019536	J16	3	1405	-1.19	-0.077	hycH	b2718	processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex)	Energy metabolism	"factor; Energy metabolism, carbon: Fermentation"
713	625	1.14	0.057	1196	987	669	1092	0.006441	0.005071	L16	3	1406	1.27	0.104	hycG	b2719	hydrogenase activity	Energy metabolism	"phenotype; Energy metabolism, carbon: Fermentation"
1531	1563	-1.02	-0.009	938	1015	1547	976	0.005762	0.011725	N16	3	1407	-2.03	-0.309	hycF	b2720	probable iron-sulfur protein of hydrogenase 3 (part of FHL complex)	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Fermentation"
1099	1052	1.04	0.019	950	1000	1076	975	0.005754	0.008150	P16	3	1408	-1.42	-0.151	hycE	b2721	large subunit of hydrogenase 3 (part of FHL complex)	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
700	641	1.09	0.038	1909	1355	671	1632	0.009632	0.005083	B18	3	1409	1.90	0.278	hycD	b2722	membrane-spanning protein of hydrogenase 3 (part of FHL complex)	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
263	197	1.00	0.000	362	420	230	391	0.002308	0.001743	D18	3	1410	1.00	0.000	hycC	b2723	membrane-spanning protein of hydrogenase 3 (part of FHL complex)	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
1028	489	2.06	0.313	2035	1458	758	1746	0.010304	0.005747	F18	3	1411	1.79	0.254	hycB	b2724	"probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex)"	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Fermentation"
2768	2208	1.25	0.098	3289	2440	2488	2864	0.016901	0.018851	H18	3	1412	-1.12	-0.047	hycA	b2725	transcriptional repression of hyc and hyp operons	Regulatory function	"regulator; Energy metabolism, carbon: Fermentation"
3021	2652	1.14	0.057	4432	3082	2837	3757	0.022170	0.021495	J18	3	1413	1.03	0.013	hypA	b2726	pleiotrophic effects on 3 hydrogenase isozymes	Energy metabolism	"phenotype; Energy metabolism, carbon: Anaerobic respiration"
6308	5807	1.09	0.036	9706	8888	6057	9297	0.054858	0.045902	L18	3	1414	1.20	0.077	hypB	b2727	"guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3"	Energy metabolism	"phenotype; Energy metabolism, carbon: Fermentation"
2645	2428	1.09	0.037	2004	2123	2536	2064	0.012177	0.019220	N18	3	1415	-1.58	-0.198	hypC	b2728	pleiotrophic effects on 3 hydrogenase isozymes	Energy metabolism	"phenotype; Energy metabolism, carbon: Anaerobic respiration"
2420	2237	1.08	0.034	5390	5468	2328	5429	0.032036	0.017645	P18	3	1416	1.82	0.259	hypD	b2729	pleiotrophic effects on 3 hydrogenase isozymes	Energy metabolism	"phenotype; Energy metabolism, carbon: Anaerobic respiration"
1000	776	1.29	0.110	835	-1082	888	-124	-0.000730	0.006729	B20	3	1417	-2.24	-0.351	hypE	b2730	plays structural role in maturation of all 3 hydrogenases	Energy metabolism	"factor; Energy metabolism, carbon: Anaerobic respiration"
559	293	1.12	0.048	717	412	426	564	0.003330	0.003229	D20	3	1418	1.03	0.013	fhlA	b2731	"formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons"	Regulatory function	"regulator; Energy metabolism, carbon: Fermentation"
329	301	1.00	0.000	701	624	315	663	0.003911	0.002387	K18	3	3718	1.30	0.115	ygbA	b2732	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
550	479	1.10	0.042	466	398	515	432	0.002548	0.003902	M7	1	1567	-1.30	-0.114	mutS	b2733	methyl-directed mismatch repair	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
214	146	1.00	0.000	402	120	180	261	0.001540	0.001362	K15	3	254	1.00	0.000	pphB	b2734	protein phosphatase 2	Putative regulatory proteins	enzyme; Not classified
589	615	-1.04	-0.018	1002	909	602	955	0.005637	0.004561	M15	3	255	1.24	0.092	ygbI	b2735	putative DEOR-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1361	1229	1.11	0.044	2027	2279	1295	2153	0.012704	0.009815	D9	3	2530	1.29	0.112	b2736	b2736	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
969	722	1.34	0.128	689	505	846	597	0.003522	0.006409	M18	3	3719	-1.82	-0.260	b2737	b2737	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
836	659	1.27	0.103	794	535	748	664	0.003920	0.005666	F9	3	2531	-1.45	-0.160	ygbL	b2738	putative epimerase/aldolase	Putative enzymes	putative enzyme; Not classified
2638	2377	1.11	0.045	2215	1613	2507	1914	0.011294	0.019001	O18	3	3720	-1.68	-0.226	ygbM	b2739	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2143	2061	1.04	0.017	3441	2843	2102	3142	0.018539	0.015930	H9	3	2532	1.16	0.066	b2740	b2740	putative transport protein	Putative transport proteins	putative transport; Not classified
4408	3937	1.12	0.049	8167	9142	4172	8654	0.051067	0.031617	A3	2	1641	1.62	0.208	rpoS	b2741	"RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins"	Regulatory function	enzyme; Global regulatory functions
6649	7073	-1.06	-0.027	13703	10511	6861	12107	0.071439	0.051991	E4	3	587	1.37	0.138	nlpD	b2742	lipoprotein	Cell structure	"membrane; Macromolecule synthesis, modification: Lipoprotein"
2395	1419	1.69	0.227	2263	757	1907	1510	0.008911	0.014449	A5	3	1745	-1.62	-0.210	pcm	b2743	L-isoaspartate protein carboxylmethyltransferase type II	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
20070	18077	1.11	0.045	21742	18650	19074	20196	0.119171	0.144536	J13	4	2645	-1.21	-0.084	surE	b2744	survival protein	Cell processes	phenotype; Not classified
892	828	1.08	0.033	1259	1060	860	1159	0.006841	0.006518	A20	3	3721	1.05	0.021	ygbO	b2745	putative hydrogenase subunit	Putative enzymes	putative enzyme; Not classified
271	156	1.00	0.000	409	341	214	375	0.002212	0.001621	C20	3	3722	1.00	0.000	ygbB	b2746	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
889	768	1.16	0.064	966	603	828	784	0.004628	0.006278	E20	3	3723	-1.36	-0.132	ygbP	b2747	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1340	1092	1.23	0.089	1623	1037	1216	1330	0.007847	0.009214	G20	3	3724	-1.17	-0.070	b2748	b2748	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1531	812	1.89	0.275	1546	780	1172	1163	0.006864	0.008880	F20	3	1419	-1.29	-0.112	ygbE	b2749	putative cytochrome oxidase subunit	Putative enzymes	putative enzyme; Not classified
936	551	1.70	0.230	873	573	743	723	0.004266	0.005633	O22	3	2200	-1.32	-0.121	cysC	b2750	adenosine 5'-phosphosulfate kinase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Sulfur metabolism
4880	4243	1.15	0.061	5426	4387	4562	4906	0.028952	0.034568	N6	2	2201	-1.19	-0.077	cysN	b2751	"ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1, probably a GTPase"	Central intermediary metabolism	enzyme; Central intermediary metabolism: Sulfur metabolism
3720	3830	-1.03	-0.013	3162	2183	3775	2673	0.015771	0.028607	C24	3	2202	-1.81	-0.259	cysD	b2752	"ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2"	Central intermediary metabolism	enzyme; Central intermediary metabolism: Sulfur metabolism
2020	1834	1.10	0.042	2094	1823	1927	1959	0.011557	0.014604	C5	3	1746	-1.26	-0.102	iap	b2753	"alkaline phosphatase isozyme conversion, aminopeptidase"	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
308	442	-1.00	0.000	436	414	375	425	0.002509	0.002843	I20	3	3725	-1.00	0.000	ygbF	b2754	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2562	2278	1.12	0.051	5127	4150	2420	4638	0.027369	0.018337	K20	3	3726	1.49	0.174	b2755	b2755	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
924	803	1.15	0.061	961	900	863	930	0.005490	0.006542	M20	3	3727	-1.19	-0.076	b2756	b2756	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1872	1511	1.24	0.093	884	783	1692	834	0.004919	0.012818	O20	3	3728	-2.61	-0.416	b2757	b2757	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2089	1654	1.26	0.101	3571	3209	1871	3390	0.020001	0.014180	A22	3	3729	1.41	0.149	b2758	b2758	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
90	-3	1.00	0.000	259	182	43	221	0.001301	0.000329	C22	3	3730	1.00	0.000	ygcK	b2759	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
830	837	-1.01	-0.004	921	597	834	759	0.004479	0.006318	E22	3	3731	-1.41	-0.149	b2760	b2760	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1636	1720	-1.05	-0.022	1884	1535	1678	1709	0.010087	0.012718	G22	3	3732	-1.26	-0.101	ygcB	b2761	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1139	1036	1.10	0.041	812	715	1087	764	0.004507	0.008241	E24	3	2203	-1.83	-0.262	cysH	b2762	3'-phosphoadenosine 5'-phosphosulfate reductase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Sulfur metabolism
3230	2778	1.16	0.066	2478	2965	3004	2722	0.016059	0.022762	G24	3	2204	-1.42	-0.151	cysI	b2763	"sulfite reductase, alpha subunit"	Central intermediary metabolism	enzyme; Central intermediary metabolism: Sulfur metabolism
3728	3501	1.06	0.027	4159	4016	3615	4087	0.024118	0.027391	I24	3	2205	-1.14	-0.055	cysJ	b2764	"sulfite reductase (NADPH), flavoprotein beta subunit"	Central intermediary metabolism	enzyme; Central intermediary metabolism: Sulfur metabolism
1339	1116	1.20	0.079	973	1032	1227	1002	0.005914	0.009302	K24	3	2206	-1.57	-0.197	ygcM	b2765	putative 6-pyruvoyl tetrahydrobiopterin synthase	Putative enzymes	putative enzyme; Not classified
1028	962	1.07	0.029	1285	900	995	1093	0.006448	0.007540	I22	3	3733	-1.17	-0.068	ygcN	b2766	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1335	1294	1.03	0.014	1523	1472	1314	1498	0.008837	0.009961	K22	3	3734	-1.13	-0.052	ygcO	b2767	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1733	2371	-1.37	-0.136	1712	1903	2052	1807	0.010665	0.015549	O15	3	256	-1.46	-0.164	ygcP	b2768	putative anti-terminator regulatory protein	Putative regulatory proteins	putative regulator; Not classified
756	658	1.15	0.060	585	415	707	500	0.002950	0.005359	H20	3	1420	-1.79	-0.252	ygcQ	b2769	putative flavoprotein	Putative enzymes	putative enzyme; Not classified
501	492	1.00	0.001	745	2630	497	1688	0.009957	0.003762	J20	3	1421	2.65	0.423	ygcR	b2770	putative transport protein	Putative transport proteins	putative transport; Not classified
369	195	1.00	0.000	406	364	282	385	0.002273	0.002138	L9	3	998	1.00	0.000	ygcS	b2771	putative transport protein	Putative transport proteins	putative transport; Not classified
815	505	1.61	0.208	856	741	660	798	0.004712	0.005003	M22	3	3735	-1.06	-0.026	b2772	b2772	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1365	1094	1.25	0.096	1374	1150	1229	1262	0.007448	0.009316	O22	3	3736	-1.25	-0.097	ygcU	b2773	putative oxidoreductase subunit	Putative enzymes	putative enzyme; Not classified
1444	871	1.66	0.220	1675	1733	1157	1704	0.010055	0.008767	J9	3	2533	1.15	0.060	ygcW	b2774	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
223	157	1.00	0.000	237	285	190	261	0.001539	0.001439	N9	3	999	1.00	0.000	yqcE	b2775	putative transport protein	Putative transport proteins	putative transport; Not classified
980	641	1.53	0.184	1662	906	811	1284	0.007576	0.006142	L9	3	2534	1.23	0.091	ygcE	b2776	putative kinase	Putative enzymes	putative enzyme; Not classified
423	388	1.00	0.000	559	562	405	561	0.003309	0.003071	N10	2	3737	1.08	0.032	ygcF	b2777	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1545	1120	1.38	0.140	1602	1420	1333	1511	0.008916	0.010097	C24	3	3738	-1.13	-0.054	ygcG	b2778	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
10554	11099	-1.05	-0.022	15594	13910	10827	14752	0.087045	0.082042	L20	3	1422	1.06	0.026	eno	b2779	enolase	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
3114	3208	-1.03	-0.013	4187	4038	3161	4113	0.024267	0.023953	M24	3	2207	1.01	0.006	pyrG	b2780	CTP synthetase	Nucleotide biosynthesis and metabolism	enzyme; Central intermediary metabolism: Nucleotide interconversions
4554	4168	1.09	0.039	4427	3915	4361	4171	0.024611	0.033047	E24	3	3739	-1.34	-0.128	mazG	b2781	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1157	1412	-1.22	-0.087	1502	1573	1284	1538	0.009074	0.009733	L13	4	2646	-1.07	-0.030	chpA	b2782	"probable growth inhibitor, PemK-like, autoregulated"	Putative factors	putative factor; Not classified
2229	2427	-1.09	-0.037	2575	2991	2328	2783	0.016422	0.017641	N13	4	2647	-1.07	-0.031	chpR	b2783	"suppressor of inhibitory function of ChpA, PemI-like, autoregulated"	Cell processes	phenotype; Not classified
3893	3803	1.02	0.010	6512	6034	3848	6273	0.037015	0.029159	A15	2	153	1.27	0.104	relA	b2784	(p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factor	Regulatory function	enzyme; Global regulatory functions
2713	2176	1.25	0.096	2259	1688	2445	1974	0.011645	0.018524	E5	3	1747	-1.59	-0.202	ygcA	b2785	putative enzyme	Putative enzymes	putative enzyme; Not classified
-13	31	-1.00	0.000	112	82	9	97	0.000573	0.000069	C15	2	154	1.00	0.000	barA	b2786	"sensor-regulator, activates OmpR by phophorylation"	Regulatory function	enzyme; Global regulatory functions
626	689	-1.10	-0.042	1263	1187	657	1225	0.007228	0.004979	C17	1	66	1.45	0.162	ygcX	b2787	putative glucarate dehydratase	Putative enzymes	putative enzyme; Not classified
1019	1254	-1.23	-0.090	1580	2091	1136	1835	0.010829	0.008609	E17	1	67	1.26	0.100	ygcY	b2788	putative glucarate dehydratase	Putative enzymes	putative enzyme; Not classified
604	444	1.21	0.082	782	642	524	712	0.004201	0.003971	G17	1	68	1.06	0.025	b2789	b2789	putative transport protein	Putative transport proteins	putative transport; Not classified
15386	15095	1.02	0.008	16797	15392	15240	16095	0.094971	0.115487	G24	3	3740	-1.22	-0.085	b2790	b2790	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6092	5417	1.12	0.051	5782	4823	5755	5302	0.031288	0.043606	I24	3	3741	-1.39	-0.144	yqcB	b2791	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2422	2051	1.18	0.072	1990	2081	2237	2035	0.012011	0.016949	K24	3	3742	-1.41	-0.150	b2792	b2792	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2918	2815	1.04	0.016	3448	3378	2866	3413	0.020138	0.021722	M24	3	3743	-1.08	-0.033	syd	b2793	interacts with secY	"Hypothetical, unclassified, unknown"	orf; Unknown function
3646	3579	1.02	0.008	3177	3256	3612	3216	0.018978	0.027374	O24	3	3744	-1.44	-0.159	yqcD	b2794	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
591	662	-1.12	-0.049	1224	1168	626	1196	0.007058	0.004744	A2	4	3745	1.49	0.173	ygdH	b2795	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
827	636	1.30	0.114	1799	1658	731	1728	0.010197	0.005541	B7	1	793	1.84	0.265	sdaC	b2796	probable serine transporter	Putative transport proteins	"putative transport; Transport of small molecules: Amino acids, amines"
1647	1193	1.38	0.140	2567	2495	1420	2531	0.014936	0.010761	E2	1	1923	1.39	0.142	sdaB	b2797	"L-serine dehydratase (deaminase), L-SD2"	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
529	572	-1.08	-0.034	865	714	550	789	0.004658	0.004170	C3	2	1642	1.12	0.048	exo	b2798	5'-3' exonuclease	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
422	368	1.00	0.000	638	470	395	554	0.003268	0.002994	I17	1	69	1.09	0.037	fucO	b2799	"L-1,2-propanediol oxidoreductase"	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
148	97	1.00	0.000	169	146	123	157	0.000928	0.000930	K17	1	70	-1.00	0.000	fucA	b2800	L-fuculose-1-phosphate aldolase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1410	1374	1.03	0.011	2041	1543	1392	1792	0.010574	0.010546	D7	1	794	1.00	0.001	fucP	b2801	fucose permease	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1447	1317	1.10	0.041	2036	1898	1382	1967	0.011605	0.010471	M17	1	71	1.11	0.045	fucI	b2802	L-fucose isomerase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1343	1204	1.12	0.047	1830	1780	1274	1805	0.010650	0.009652	O17	1	72	1.10	0.043	fucK	b2803	L-fuculokinase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
538	530	1.01	0.006	623	691	534	657	0.003876	0.004048	A19	1	73	-1.04	-0.019	fucU	b2804	protein of fucose operon	Carbon compound catabolism	phenotype; Degradation of small molecules: Carbon compounds
285	253	1.00	0.000	654	498	269	576	0.003397	0.002038	C19	1	74	1.13	0.054	fucR	b2805	positive regulator of the fuc operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
4114	4119	-1.00	0.000	5409	5665	4117	5537	0.032672	0.031195	C2	4	3746	1.05	0.020	ygdE	b2806	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
591	548	1.08	0.032	819	943	570	881	0.005200	0.004316	E2	4	3747	1.20	0.081	ygdD	b2807	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1479	949	1.56	0.193	1299	496	1214	897	0.005295	0.009198	O24	3	2208	-1.74	-0.240	gcvA	b2808	positive regulator of gcv operon	Regulatory function	"regulator; Central intermediary metabolism: Pool, multipurpose conversions"
1016	712	1.43	0.154	2037	2622	864	2330	0.013746	0.006545	G2	4	3748	2.10	0.322	b2809	b2809	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1876	2114	-1.13	-0.052	3596	3540	1995	3568	0.021053	0.015118	I2	4	3749	1.39	0.144	b2810	b2810	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3845	3412	1.13	0.052	4348	5399	3629	4873	0.028755	0.027496	K2	4	3750	1.05	0.019	ygdK	b2811	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2802	2786	1.01	0.003	4232	5813	2794	5023	0.029639	0.021172	M2	4	3751	1.40	0.146	ygdL	b2812	putative enzyme	Putative enzymes	putative enzyme; Not classified
512	603	-1.18	-0.071	1192	1632	557	1412	0.008333	0.004223	K8	2	510	1.97	0.295	mltA	b2813	membrane-bound lytic murein transglycosylase A	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
60686	45233	1.34	0.128	51151	49114	52960	50132	0.295817	0.401314	M8	2	511	-1.36	-0.132	b2817	b2817	putative amidase	Putative enzymes	putative enzyme; Not classified
1439	1485	-1.03	-0.014	1916	1710	1462	1813	0.010696	0.011078	G2	1	1924	-1.04	-0.015	argA	b2818	N-acetylglutamate synthase; amino acid acetyltransferase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Arginine
776	948	-1.22	-0.087	339	701	862	520	0.003068	0.006530	E3	2	1643	-2.13	-0.328	recD	b2819	"DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
1348	2457	-1.82	-0.261	619	2650	1902	1635	0.009647	0.014417	G3	2	1644	-1.49	-0.174	recB	b2820	"DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
6373	5470	1.17	0.066	3279	3082	5921	3181	0.018769	0.044869	G5	3	1748	-2.39	-0.378	ptr	b2821	protease III	Cell processes	"enzyme; Degradation of proteins, peptides, glyco"
289	335	-1.00	0.000	293	238	312	265	0.001565	0.002364	I3	2	1645	-1.00	0.000	recC	b2822	"DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
688	587	1.17	0.069	543	373	637	458	0.002704	0.004830	P13	4	2648	-1.61	-0.207	ppdC	b2823	prepilin peptidase dependent protein C	Putative enzymes	putative enzyme; Not classified
906	788	1.15	0.061	1433	951	847	1192	0.007033	0.006416	O2	4	3752	1.10	0.040	ygdB	b2824	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
632	548	1.15	0.062	357	504	590	430	0.002540	0.004474	B15	4	2649	-1.49	-0.174	ppdB	b2825	prepilin peptidase dependent protein B	Putative enzymes	putative enzyme; Not classified
3379	3260	1.04	0.016	4629	5459	3320	5044	0.029763	0.025155	D15	4	2650	1.18	0.073	ppdA	b2826	prepilin peptidase dependent protein A	Putative enzymes	putative enzyme; Not classified
476	712	-1.42	-0.153	591	920	594	756	0.004458	0.004499	M2	2	2023	-1.01	-0.004	thyA	b2827	thymidylate synthetase	Nucleotide biosynthesis and metabolism	enzyme; 2'-Deoxyribonucleotide metabolism
1230	1132	1.09	0.036	1152	1159	1181	1156	0.006819	0.008949	K14	2	2070	-1.31	-0.118	lgt	b2828	phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; a major membrane phospholipid	Fatty acid and phospholipid metabolism	"enzyme; Macromolecule synthesis, modification: Phospholipids"
4838	4865	-1.01	-0.002	8769	8199	4852	8484	0.050060	0.036765	F7	1	795	1.36	0.134	ptsP	b2829	"PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins)"	Transport and binding proteins	enzyme; Transport of small molecules: Other
578	570	1.01	0.006	985	605	574	795	0.004691	0.004350	P12	1	1200	1.08	0.033	ygdP	b2830	putative invasion protein	Putative factors	putative factor; Not classified
525	399	1.05	0.021	458	252	462	355	0.002093	0.003499	O7	1	1568	-1.17	-0.067	mutH	b2831	methyl-directed mismatch repair	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1153	1163	-1.01	-0.004	1563	1236	1158	1399	0.008257	0.008776	P9	3	1000	-1.06	-0.026	b2832	b2832	putative transport protein	Putative transport proteins	putative transport; Not classified
920	983	-1.07	-0.029	1598	2131	951	1864	0.011000	0.007209	A4	4	3753	1.53	0.184	b2833	b2833	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
576	597	-1.04	-0.015	832	1001	586	916	0.005407	0.004444	C4	4	3754	1.22	0.085	b2834	b2834	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
458	406	1.00	0.000	1223	1152	432	1188	0.007007	0.003273	B14	1	1201	2.14	0.331	ygeD	b2835	putative resistance proteins	Putative factors	orf; Drug/analog sensitivity
5023	4823	1.04	0.018	8048	8162	4923	8105	0.047823	0.037304	M14	2	2071	1.28	0.108	aas	b2836	2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
329	231	1.00	0.000	266	223	280	244	0.001442	0.002124	E19	1	75	-1.00	0.000	galR	b2837	repressor of galETK operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
2096	1571	1.33	0.125	3886	3609	1833	3748	0.022114	0.013892	I2	1	1925	1.59	0.202	lysA	b2838	diaminopimelate decarboxylase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Lysine
1180	952	1.24	0.093	1615	1589	1066	1602	0.009452	0.008076	K2	1	1926	1.17	0.068	lysR	b2839	positive regulator for lys	Regulatory function	regulator; Amino acid biosynthesis: Lysine
691	638	1.08	0.035	1084	1287	664	1186	0.006997	0.005034	D14	1	1202	1.39	0.143	ygeA	b2840	putative resistance proteins	Putative transport proteins	putative transport; Drug/analog sensitivity
380	434	-1.00	0.000	1176	1234	407	1205	0.007110	0.003083	H7	1	796	2.31	0.363	araE	b2841	low-affinity L-arabinose transport system proton symport protein	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2138	2315	-1.08	-0.035	5189	4734	2227	4961	0.029275	0.016873	A2	4	2209	1.74	0.239	kduD	b2842	2-deoxy-D-gluconate 3-dehydrogenase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
484	367	1.00	0.000	772	311	426	541	0.003194	0.003225	G19	1	76	-1.01	-0.004	kduI	b2843	homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
516	439	1.03	0.013	652	856	477	754	0.004450	0.003616	O14	2	2072	1.23	0.090	yqeF	b2844	putative acyltransferase	Putative enzymes	putative enzyme; Not classified
5568	5290	1.05	0.022	4379	4249	5429	4314	0.025455	0.041142	B11	3	1001	-1.62	-0.209	b2845	b2845	putative transporter protein	Putative transport proteins	putative transport; Not classified
48	157	-1.00	0.000	-3	139	103	68	0.000401	0.000777	E4	4	3755	-1.00	0.000	yqeH	b2846	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
221	194	1.00	0.000	297	196	208	247	0.001455	0.001573	A17	3	257	-1.00	0.000	yqeI	b2847	putative sensory transducer	Putative regulatory proteins	putative transport; Not classified
246	284	-1.00	0.000	425	449	265	437	0.002579	0.002007	G4	4	3756	1.00	0.000	yqeJ	b2848	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
259	205	1.00	0.000	188	87	232	138	0.000811	0.001758	I4	4	3757	-1.00	0.000	yqeK	b2849	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
101	101	1.00	0.000	112	-4	101	54	0.000321	0.000767	K4	4	3758	-1.00	0.000	ygeF	b2850	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-30	74	-1.00	0.000	60	-10	22	25	0.000148	0.000167	M4	4	3759	-1.00	0.000	ygeG	b2851	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1849	1411	1.31	0.117	4569	3425	1630	3997	0.023584	0.012349	C17	3	258	1.91	0.281	ygeH	b2852	putative invasion protein	Putative factors	putative factor; Not classified
28	83	-1.00	0.000	180	203	55	191	0.001130	0.000419	O4	4	3760	1.00	0.000	b2853	b2853	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
124	615	-1.23	-0.090	355	802	370	578	0.003412	0.002801	A6	4	3761	1.14	0.056	b2854	b2854	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
482	-1298	1.00	0.000	99	-822	-408	-362	-0.002134	-0.003093	E17	3	259	1.00	0.000	ygeK	b2855	putative 2-component transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
451	343	1.00	0.000	290	366	397	328	0.001936	0.003008	C6	4	3762	-1.00	-0.001	b2856	b2856	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
80	53	1.00	0.000	180	142	66	161	0.000951	0.000504	E6	4	3763	1.00	0.000	b2857	b2857	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
26	51	-1.00	0.000	59	125	39	92	0.000544	0.000292	G6	4	3764	1.00	0.000	b2858	b2858	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
903	921	-1.02	-0.008	508	484	912	496	0.002928	0.006912	I6	4	3765	-2.30	-0.362	b2859	b2859	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1401	1557	-1.11	-0.046	1246	1087	1479	1167	0.006883	0.011207	C23	4	378	-1.63	-0.212	yi22_4	b2860	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
16996	15902	1.07	0.029	22834	25378	16449	24106	0.142242	0.124648	E23	4	379	1.14	0.057	yi21_4	b2861	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1022	838	1.22	0.086	323	474	930	398	0.002351	0.007048	K6	4	3766	-2.35	-0.371	b2862	b2862	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
368	407	-1.00	0.000	282	407	387	344	0.002032	0.002933	M6	4	3767	-1.00	0.000	b2863	b2863	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4810	4979	-1.03	-0.015	6970	8453	4894	7711	0.045501	0.037089	O8	2	512	1.23	0.089	b2865	b2865	putative lipoprotein	Putative cell structure	putative structure; Not classified
4352	4922	-1.13	-0.053	4066	3806	4637	3936	0.023224	0.035136	O6	4	3768	-1.51	-0.180	b2866	b2866	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
73772	72800	1.01	0.006	73565	73219	73286	73392	0.433064	0.555342	N9	3	2535	-1.28	-0.108	ygeT	b2867	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
1280	1318	-1.03	-0.012	1398	1078	1299	1238	0.007304	0.009844	P9	3	2536	-1.35	-0.130	b2868	b2868	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
2375	1501	1.58	0.199	3316	2928	1938	3122	0.018421	0.014685	B11	3	2537	1.25	0.098	ygeV	b2869	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
334	457	-1.00	0.000	464	655	396	560	0.003303	0.002998	A8	4	3769	1.10	0.042	ygeW	b2870	putative carbamoyl transferase	Putative enzymes	putative enzyme; Not classified
1300	574	2.26	0.355	1233	926	937	1079	0.006369	0.007101	D11	3	2538	-1.11	-0.047	ygeX	b2871	putative dehydratase	Putative enzymes	putative enzyme; Not classified
2988	3046	-1.02	-0.008	2043	2639	3017	2341	0.013813	0.022862	F11	3	2539	-1.66	-0.219	ygeY	b2872	putative deacetylase	Putative enzymes	putative enzyme; Not classified
1062	1065	-1.00	-0.001	793	927	1063	860	0.005076	0.008058	C8	4	3770	-1.59	-0.201	b2873	b2873	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1220	1272	-1.04	-0.018	3131	2650	1246	2890	0.017055	0.009440	H11	3	2540	1.81	0.257	yqeA	b2874	putative kinase	Putative enzymes	putative enzyme; Not classified
1055	824	1.28	0.107	1924	1153	940	1539	0.009078	0.007120	J11	3	2541	1.28	0.106	b2875	b2875	putative synthases	Putative enzymes	putative enzyme; Not classified
1119	1288	-1.15	-0.061	1103	1038	1203	1070	0.006317	0.009120	E8	4	3771	-1.44	-0.159	b2876	b2876	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1201	1173	1.02	0.010	423	492	1187	457	0.002697	0.008996	G8	4	3772	-3.00	-0.477	ygfJ	b2877	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
908	746	1.22	0.086	886	760	827	823	0.004859	0.006267	L11	3	2542	-1.29	-0.110	b2878	b2878	"putative oxidoreductase, Fe-S subunit"	Putative enzymes	putative enzyme; Not classified
2563	2536	1.01	0.005	1317	1722	2549	1520	0.008967	0.019317	O10	3	616	-2.15	-0.333	b2879	b2879	putative proteoglycan	Putative cell structure	putative structure; Not classified
2944	3708	-1.26	-0.100	5955	5412	3326	5684	0.033537	0.025201	I8	4	3773	1.33	0.124	b2880	b2880	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1233	1214	1.02	0.007	1045	594	1224	820	0.004836	0.009272	N11	3	2543	-1.92	-0.283	b2881	b2881	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
962	1215	-1.26	-0.102	3318	2657	1089	2987	0.017628	0.008250	D11	3	1002	2.14	0.330	ygfO	b2882	putative transport protein	Putative transport proteins	putative transport; Not classified
562	550	1.02	0.009	752	593	556	673	0.003969	0.004210	K8	4	3774	-1.06	-0.026	ygfP	b2883	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
207	162	1.00	0.000	414	516	185	465	0.002744	0.001399	M8	4	3775	1.00	0.000	ygfQ	b2884	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3697	3807	-1.03	-0.013	2887	2630	3752	2758	0.016275	0.028432	P11	3	2544	-1.75	-0.242	ygfR	b2885	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
6323	5782	1.09	0.039	6854	6988	6053	6921	0.040839	0.045866	N20	3	1423	-1.12	-0.050	ygfS	b2886	"putative oxidoreductase, Fe-S subunit"	Putative enzymes	putative enzyme; Not classified
1597	1307	1.22	0.087	1978	1637	1452	1807	0.010664	0.011004	B13	3	2545	-1.03	-0.014	ygfT	b2887	"putative oxidoreductase, Fe-S subunit"	Putative enzymes	putative enzyme; Not classified
1073	660	1.63	0.211	1429	848	866	1138	0.006717	0.006565	F11	3	1003	1.02	0.010	ygfU	b2888	putative permease	Putative transport proteins	putative transport; Not classified
339	230	1.00	0.000	584	634	284	609	0.003593	0.002155	D13	3	2546	1.20	0.078	b2889	b2889	putative enzyme	Putative enzymes	putative enzyme; Not classified
4315	3761	1.15	0.060	4825	3427	4038	4126	0.024347	0.030601	I5	3	1749	-1.26	-0.099	lysS	b2890	"lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNA"	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
5547	5003	1.11	0.045	5842	2956	5275	4399	0.025956	0.039971	K5	3	1750	-1.54	-0.188	prfB	b2891	peptide chain release factor RF-2	"Translation, post-translational modification"	factor; Proteins - translation and modification
1432	1268	1.13	0.053	1257	1308	1350	1282	0.007567	0.010227	K3	2	1646	-1.35	-0.131	recJ	b2892	"ssDNA exonuclease, 5' --> 3' specific"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
1050	930	1.13	0.053	2612	2013	990	2312	0.013645	0.007503	A10	2	513	1.82	0.260	dsbC	b2893	protein disulfide isomerase II	Cell structure	enzyme; Surface structures
654	811	-1.24	-0.093	880	840	732	860	0.005076	0.005550	A9	1	1569	-1.09	-0.039	xerD	b2894	site-specific recombinase	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
4256	3729	1.14	0.057	3139	2387	3992	2763	0.016301	0.030253	P20	3	1424	-1.86	-0.269	fldB	b2895	flavodoxin 2	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
464	559	-1.12	-0.048	1041	1053	511	1047	0.006178	0.003872	O8	4	3776	1.60	0.203	b2896	b2896	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
210	226	-1.00	0.000	449	311	218	380	0.002244	0.001651	A10	4	3777	1.00	0.000	ygfY	b2897	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1223	883	1.39	0.142	1370	958	1053	1164	0.006869	0.007978	C10	4	3778	-1.16	-0.065	ygfZ	b2898	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1202	1006	1.19	0.077	1159	878	1104	1018	0.006009	0.008365	F13	3	2547	-1.39	-0.144	b2899	b2899	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
759	787	-1.04	-0.016	709	558	773	633	0.003738	0.005859	E10	4	3779	-1.57	-0.195	yqfB	b2900	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7616	7956	-1.04	-0.019	7813	7983	7786	7898	0.046602	0.059002	I19	1	77	-1.27	-0.102	bglA	b2901	6-phospho-beta-glucosidase A; cryptic	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
8051	6165	1.31	0.116	12405	12514	7108	12459	0.073519	0.053865	K19	1	78	1.36	0.135	ygfF	b2902	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
4783	3951	1.21	0.083	7227	6804	4367	7015	0.041396	0.033093	C2	4	2210	1.25	0.097	gcvP	b2903	"glycine decarboxylase, P protein of glycine cleavage system"	Amino acid biosynthesis	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
739	514	1.44	0.158	966	1505	626	1236	0.007290	0.004746	E2	4	2211	1.54	0.186	gcvH	b2904	"in glycine cleavage complex, carrier of aminomethyl moiety via covalently bound lipoyl cofactor"	Amino acid biosynthesis	"carrier; Central intermediary metabolism: Pool, multipurpose conversions"
3330	2993	1.11	0.046	4413	4404	3162	4409	0.026013	0.023960	G2	4	2212	1.09	0.036	gcvT	b2905	aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system	Amino acid biosynthesis	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
645	509	1.27	0.103	519	607	577	563	0.003324	0.004374	G10	4	3780	-1.32	-0.119	visC	b2906	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3069	2327	1.32	0.120	4083	2373	2698	3228	0.019046	0.020442	D11	1	2346	-1.07	-0.031	ubiH	b2907	"2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1, 4-benzoquinone"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
1951	1349	1.45	0.160	2779	2352	1650	2565	0.015138	0.012502	M5	3	1751	1.21	0.083	pepP	b2908	proline aminopeptidase P II	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
1949	2090	-1.07	-0.030	1924	1834	2020	1879	0.011089	0.015305	I10	4	3781	-1.38	-0.140	ygfB	b2909	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1224	1022	1.20	0.078	2322	2349	1123	2336	0.013783	0.008513	K10	4	3782	1.62	0.209	ygfE	b2910	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
766	703	1.09	0.038	1413	1078	734	1245	0.007348	0.005564	H13	3	2548	1.32	0.121	ygfA	b2912	putative ligase	Putative enzymes	putative enzyme; Not classified
11212	11096	1.01	0.005	15872	13475	11154	14674	0.086585	0.084522	M2	1	1927	1.02	0.010	serA	b2913	D-3-phosphoglycerate dehydrogenase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Serine
928	572	1.62	0.210	1448	1693	750	1570	0.009266	0.005685	B22	3	1425	1.63	0.212	rpiA	b2914	"ribosephosphate isomerase, constitutive"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway"
6303	5941	1.06	0.026	7523	7089	6122	7306	0.043111	0.046392	M10	4	3783	-1.08	-0.032	yqfE	b2915	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2513	2878	-1.14	-0.059	2356	2499	2696	2428	0.014326	0.020426	C9	1	1570	-1.43	-0.154	iciA	b2916	"replication initiation inhibitor, binds to 13-mers at oriC"	Regulatory function	"regulator; DNA - replication, repair, restriction/modification"
51	277	-1.00	0.000	14	230	164	122	0.000719	0.001242	A16	2	2073	-1.00	0.000	sbm	b2917	methylmalonyl-CoA mutase (MCM)	Fatty acid and phospholipid metabolism	enzyme; Degradation of small molecules: Fatty acids
449	559	-1.12	-0.048	1522	1166	504	1344	0.007929	0.003819	H11	3	1004	2.08	0.317	ygfD	b2918	putative nucleotide-binding protein	Putative transport proteins	phenotype; Not classified
445	883	-1.77	-0.247	534	671	664	602	0.003553	0.005032	J13	3	2549	-1.42	-0.151	ygfG	b2919	putative enzyme	Putative enzymes	putative enzyme; Not classified
804	398	1.61	0.206	998	463	601	731	0.004311	0.004553	L13	3	2550	-1.06	-0.024	ygfH	b2920	putative coenzyme A transferase	Putative enzymes	putative enzyme; Not classified
1041	944	1.10	0.043	1241	1159	992	1200	0.007080	0.007520	G17	3	260	-1.06	-0.026	ygfI	b2921	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
1946	898	2.17	0.336	3174	1600	1422	2387	0.014084	0.010777	A12	3	617	1.31	0.116	yggE	b2922	putative actin	"Hypothetical, unclassified, unknown"	phenotype; Not classified
404	716	-1.43	-0.156	641	631	560	636	0.003755	0.004247	O10	4	3784	-1.13	-0.053	yggA	b2923	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2544	2360	1.08	0.033	7781	7416	2452	7599	0.044839	0.018583	J11	3	1005	2.41	0.383	yggB	b2924	putative transport protein	Putative transport proteins	putative transport; Not classified
2258	1854	1.22	0.086	4316	2951	2056	3633	0.021439	0.015578	D22	3	1426	1.38	0.139	fba	b2925	"fructose-bisphosphate aldolase, class II"	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
5203	3457	1.51	0.178	6179	5732	4330	5956	0.035142	0.032811	F22	3	1427	1.07	0.030	pgk	b2926	phosphoglycerate kinase	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
23279	28940	-1.24	-0.095	33844	42296	26110	38070	0.224639	0.197852	I2	4	2213	1.14	0.055	epd	b2927	D-erythrose 4-phosphate dehydrogenase	Central intermediary metabolism	enzyme; Central intermediary metabolism
4861	4556	1.07	0.028	6066	5518	4708	5792	0.034177	0.035678	A12	4	3785	-1.04	-0.019	yggC	b2928	putative kinase	Putative enzymes	putative enzyme; Not classified
697	739	-1.06	-0.025	642	708	718	675	0.003982	0.005442	I17	3	261	-1.37	-0.136	yggD	b2929	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
287	328	-1.00	0.000	195	209	308	202	0.001192	0.002331	C12	4	3786	-1.00	0.000	yggF	b2930	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7827	7804	1.00	0.001	22494	21820	7816	22157	0.130740	0.059227	N13	3	2551	2.21	0.344	b2931	b2931	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
777	845	-1.09	-0.037	722	543	811	633	0.003734	0.006144	E12	4	3787	-1.65	-0.216	yggP	b2932	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1077	890	1.21	0.083	1368	1324	983	1346	0.007944	0.007452	J7	1	797	1.07	0.028	cmtA	b2933	"PTS system, mannitol-specific enzyme II component, cryptic"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
3056	2769	1.10	0.043	11122	10015	2912	10569	0.062362	0.022069	L7	1	798	2.83	0.451	cmtB	b2934	"PTS system, mannitol-specific enzyme II component, cryptic"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
78151	75062	1.04	0.018	40380	37199	76607	38790	0.228886	0.580507	H22	3	1428	-2.54	-0.404	tktA	b2935	transketolase 1 isozyme	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway"
2545	2412	1.06	0.023	2983	2807	2479	2895	0.017081	0.018782	G12	4	3788	-1.10	-0.041	yggG	b2936	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
71954	75287	-1.05	-0.020	99391	88709	73621	94050	0.554961	0.557879	K2	4	2214	-1.01	-0.002	speB	b2937	agmatinase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Polyamine biosynthesis
9431	9260	1.02	0.008	11749	9294	9345	10521	0.062084	0.070818	M2	4	2215	-1.14	-0.057	speA	b2938	biosynthetic arginine decarboxylase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Polyamine biosynthesis
114	156	-1.00	0.000	316	215	135	266	0.001568	0.001023	I12	4	3789	1.00	0.000	yqgB	b2939	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
805	804	1.00	0.001	550	602	804	576	0.003399	0.006096	K12	4	3790	-1.79	-0.254	yqgC	b2940	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1341	1480	-1.10	-0.043	1216	1257	1410	1236	0.007296	0.010686	M12	4	3791	-1.46	-0.166	yqgD	b2941	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
16498	16273	1.01	0.006	21716	22760	16386	22238	0.131218	0.124167	O2	4	2216	1.06	0.024	metK	b2942	"methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met genes"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
566	536	1.05	0.023	1290	1257	551	1273	0.007513	0.004175	N7	1	799	1.80	0.255	galP	b2943	galactose-proton symport of transport system	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
482	529	-1.06	-0.024	663	621	506	642	0.003789	0.003831	O12	4	3792	-1.01	-0.005	sprT	b2944	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
20648	18655	1.11	0.044	61590	57752	19652	59671	0.352102	0.148915	M3	2	1647	2.36	0.374	endA	b2945	DNA-specific endonuclease I	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
489	673	-1.35	-0.129	480	726	581	603	0.003558	0.004402	A14	4	3793	-1.24	-0.092	yggJ	b2946	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1204	992	1.21	0.084	1051	1147	1098	1099	0.006486	0.008319	F11	1	2347	-1.28	-0.108	gshB	b2947	glutathione synthetase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione"
895	728	1.23	0.090	1329	1262	811	1295	0.007643	0.006149	C14	4	3794	1.24	0.094	yqgE	b2948	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
747	756	-1.01	-0.005	754	641	752	698	0.004118	0.005697	E14	4	3795	-1.38	-0.141	yqgF	b2949	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
10558	10430	1.01	0.005	11324	10202	10494	10763	0.063511	0.079521	L11	3	1006	-1.25	-0.098	yggR	b2950	putative protein transport	Putative transport proteins	putative transport; Not classified
351	395	-1.00	0.000	289	511	373	400	0.002359	0.002825	G14	4	3796	-1.00	0.000	yggS	b2951	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2424	2346	1.03	0.014	2327	2780	2385	2554	0.015068	0.018071	N11	3	1007	-1.20	-0.079	yggT	b2952	putative resistance protein	Putative transport proteins	putative transport; Drug/analog sensitivity
294	416	-1.00	0.000	250	395	355	322	0.001901	0.002690	I14	4	3797	-1.00	0.000	yggU	b2953	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
960	776	1.24	0.093	1394	773	868	1084	0.006394	0.006577	C12	3	618	-1.03	-0.012	yggV	b2954	putative ribosomal protein	Putative cell structure	putative structure; Not classified
1403	1266	1.11	0.045	1454	1647	1334	1551	0.009151	0.010111	H11	1	2348	-1.10	-0.043	yggW	b2955	putative oxidase	Putative enzymes	putative enzyme; Not classified
16898	16269	1.04	0.016	12983	12367	16583	12675	0.074791	0.125665	E12	3	619	-1.68	-0.225	yggM	b2956	putative alpha helix chain	"Hypothetical, unclassified, unknown"	phenotype; Not classified
1221	1185	1.03	0.013	1425	1051	1203	1238	0.007305	0.009118	O2	1	1928	-1.25	-0.096	ansB	b2957	periplasmic L-asparaginase II	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
439	302	1.00	0.000	362	386	370	374	0.002206	0.002806	K14	4	3798	-1.00	0.000	yggN	b2958	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2263	2253	1.00	0.002	3091	3734	2258	3412	0.020136	0.017111	M14	4	3799	1.18	0.071	yggL	b2959	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1122	1077	1.04	0.018	2171	2044	1099	2108	0.012437	0.008329	O14	4	3800	1.49	0.174	yggH	b2960	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1294	964	1.34	0.128	851	648	1129	749	0.004422	0.008554	E9	1	1571	-1.93	-0.287	mutY	b2961	adenine glycosylase; G.C --> T.A transversions	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
759	687	1.10	0.043	614	619	723	616	0.003636	0.005481	A16	4	3801	-1.51	-0.178	yggX	b2962	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1079	997	1.08	0.034	1004	651	1038	828	0.004883	0.007864	C16	4	3802	-1.61	-0.207	mltC	b2963	membrane-bound lytic murein transglycosylase C	Cell processes	"putative enzyme; Murein sacculus, peptidoglycan"
8287	8237	1.01	0.003	21080	20825	8262	20952	0.123634	0.062608	P7	1	800	1.97	0.296	nupG	b2964	"transport of nucleosides, permease protein"	Transport and binding proteins	"transport; Transport of small molecules: Nucleosides, purines, pyrimidines"
621	669	-1.08	-0.032	479	848	645	663	0.003913	0.004888	A4	4	2217	-1.25	-0.097	speC	b2965	ornithine decarboxylase isozyme	Central intermediary metabolism	enzyme; Central intermediary metabolism: Polyamine biosynthesis
2055	2030	1.01	0.005	2722	3178	2042	2950	0.017406	0.015476	P11	3	1008	1.12	0.051	yqgA	b2966	putative transport protein	Putative transport proteins	putative transport; Not classified
25757	25310	1.02	0.008	50525	47746	25534	49135	0.289933	0.193488	B9	1	801	1.50	0.176	yghD	b2968	putative secretion pathway protein	Putative transport proteins	putative transport; Not classified
2591	2479	1.05	0.019	1267	1530	2535	1399	0.008252	0.019207	E16	4	3803	-2.33	-0.367	yghE	b2969	putative general secretion pathway for protein export (GSP)	Putative transport proteins	putative transport; Not classified
390	338	1.00	0.000	502	355	364	429	0.002528	0.002758	D9	1	802	-1.00	0.000	b2970	b2970	putative general secretion pathway for protein export (GSP)	Putative transport proteins	putative transport; Not classified
350	344	1.00	0.000	661	676	347	668	0.003943	0.002631	G16	4	3804	1.31	0.119	b2971	b2971	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
492	363	1.00	0.000	319	307	427	313	0.001847	0.003238	P13	3	2552	-1.08	-0.033	b2972	b2972	putative peptidase	Putative enzymes	putative enzyme; Not classified
909	946	-1.04	-0.017	762	981	928	872	0.005143	0.007031	I16	4	3805	-1.37	-0.136	b2973	b2973	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1475	1679	-1.14	-0.056	2672	2011	1577	2342	0.013819	0.011949	B15	3	2553	1.16	0.063	b2974	b2974	putative endoglucanase	Putative cell structure	putative structure; Not classified
3420	3962	-1.16	-0.064	5535	5496	3691	5516	0.032547	0.027970	B13	3	1009	1.16	0.066	yghK	b2975	putative permease	Putative transport proteins	putative transport; Not classified
908	779	1.17	0.067	980	932	843	956	0.005642	0.006390	C4	4	2218	-1.13	-0.054	glcB	b2976	malate synthase G	Central intermediary metabolism	enzyme; Central intermediary metabolism: Glyoxylate bypass
3107	2939	1.06	0.024	5065	4785	3023	4925	0.029061	0.022907	M19	1	79	1.27	0.103	glcG	b2977	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1004	741	1.36	0.132	1628	1467	873	1547	0.009129	0.006613	D15	3	2554	1.38	0.140	glcF	b2978	glycolate oxidase iron-sulfur subunit	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
4425	4381	1.01	0.004	1766	2124	4403	1945	0.011479	0.033364	O19	1	80	-2.91	-0.463	glcD	b2979	glycolate oxidase subunit D	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
2203	2301	-1.04	-0.019	6956	6822	2252	6889	0.040651	0.017065	A21	1	81	2.38	0.377	glcC	b2980	transcriptional activator for glc operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
410	592	-1.18	-0.073	428	502	501	465	0.002744	0.003793	K16	4	3806	-1.26	-0.102	b2981	b2981	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8701	8805	-1.01	-0.005	4631	4305	8753	4468	0.026364	0.066328	G23	4	380	-2.52	-0.401	trs5_9	b2982	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
313	295	1.00	0.000	315	338	304	326	0.001926	0.002305	M16	4	3807	-1.00	0.000	yghQ	b2983	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1329	1308	1.02	0.007	846	1063	1318	954	0.005632	0.009990	O16	4	3808	-1.77	-0.249	yghR	b2984	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
162	229	-1.00	0.000	306	333	195	319	0.001882	0.001479	A18	4	3809	1.00	0.000	yghS	b2985	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1663	1582	1.05	0.021	706	1284	1622	995	0.005871	0.012295	C18	4	3810	-2.09	-0.321	yghT	b2986	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
105	124	-1.00	0.000	283	135	114	209	0.001233	0.000865	F9	1	803	1.00	0.000	pitB	b2987	low-affinity phosphate transport	Transport and binding proteins	transport; Transport of small molecules: Anions
1638	1424	1.15	0.061	2209	2002	1531	2105	0.012424	0.011602	E4	4	2219	1.07	0.030	gsp	b2988	glutathionylspermidine synthetase/amidase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Polyamine biosynthesis
15319	13850	1.11	0.044	10845	10915	14585	10880	0.064200	0.110520	E18	4	3811	-1.72	-0.236	b2989	b2989	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
146	0	1.00	0.000	415	443	73	429	0.002530	0.000556	J22	3	1429	1.00	0.000	hybG	b2990	hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2	Energy metabolism	"phenotype; Energy metabolism, carbon: Anaerobic respiration"
42	194	-1.00	0.000	202	138	118	170	0.001002	0.000894	L22	3	1430	1.00	0.000	hybF	b2991	may modulate levels of hydrogenease-2	Regulatory function	"regulator; Energy metabolism, carbon: Anaerobic respiration"
2313	2360	-1.02	-0.009	2226	745	2336	1485	0.008765	0.017705	N22	3	1431	-2.02	-0.305	hybE	b2992	member of hyb operon	Energy metabolism	"phenotype; Energy metabolism, carbon: Anaerobic respiration"
34185	33547	1.02	0.008	30780	28780	33866	29780	0.175720	0.256632	P22	3	1432	-1.46	-0.164	hybD	b2993	probable processing element for hydrogenase-2	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Anaerobic respiration"
359	445	-1.00	0.000	906	851	402	879	0.005184	0.003048	B24	3	1433	1.70	0.231	hybC	b2994	"probable large subunit, hydrogenase-2"	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Anaerobic respiration"
2819	2596	1.09	0.036	3909	2942	2707	3426	0.020214	0.020514	D24	3	1434	-1.01	-0.006	hybB	b2995	probable cytochrome Ni/Fe component of hydrogenase-2	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Anaerobic respiration"
3929	3171	1.24	0.093	6072	5298	3550	5685	0.033545	0.026901	F24	3	1435	1.25	0.096	hybA	b2996	hydrogenase-2 small subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
6520	5794	1.13	0.051	5091	4880	6157	4985	0.029417	0.046653	F15	3	2555	-1.59	-0.200	b2997	b2997	putative hydrogenase subunit	Putative enzymes	putative enzyme; Not classified
2523	3038	-1.20	-0.081	4014	3929	2780	3972	0.023435	0.021068	G18	4	3812	1.11	0.046	b2998	b2998	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
234	351	-1.00	0.000	389	435	293	412	0.002431	0.002219	I18	4	3813	1.00	0.000	b2999	b2999	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
454	457	-1.00	0.000	598	744	456	671	0.003959	0.003453	K18	4	3814	1.15	0.059	b3000	b3000	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
962	710	1.35	0.132	1261	1062	836	1162	0.006854	0.006335	H15	3	2556	1.08	0.034	b3001	b3001	putative reductase	Putative enzymes	putative enzyme; Not classified
1164	1388	-1.19	-0.076	1771	2153	1276	1962	0.011579	0.009669	M18	4	3815	1.20	0.078	yqhA	b3002	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
9944	9152	1.09	0.036	9301	9224	9548	9263	0.054656	0.072355	J15	3	2557	-1.32	-0.122	yghA	b3003	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
483	525	-1.05	-0.021	1966	1930	504	1948	0.011495	0.003821	O18	4	3816	3.01	0.478	b3004	b3004	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2394	1857	1.29	0.110	8570	6866	2126	7718	0.045543	0.016107	H9	1	804	2.83	0.451	exbD	b3005	uptake of enterochelin; tonB-dependent uptake of B colicins	Transport and binding proteins	transport; Transport of small molecules: Cations
3967	3075	1.29	0.111	15814	14392	3521	15103	0.089118	0.026681	J9	1	805	3.34	0.524	exbB	b3006	uptake of enterochelin; tonB-dependent uptake of B colicins	Transport and binding proteins	transport; Transport of small molecules: Cations
148	254	-1.00	0.000	58	181	201	120	0.000707	0.001526	A20	4	3817	-1.00	0.000	b3007	b3007	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1742	1807	-1.04	-0.016	2321	2390	1775	2356	0.013901	0.013449	A4	1	1929	1.03	0.014	metC	b3008	cystathionine beta-lyase (beta-cystathionase)	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Methionine
1098	1093	1.00	0.002	777	786	1095	781	0.004610	0.008298	C20	4	3818	-1.80	-0.255	yghB	b3009	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
40889	36988	1.11	0.044	36029	37896	38939	36963	0.218106	0.295069	L15	3	2558	-1.35	-0.131	yqhC	b3010	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
761	645	1.18	0.072	1134	1024	703	1079	0.006366	0.005325	N15	3	2559	1.20	0.078	yqhD	b3011	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
2884	2266	1.27	0.105	2950	1818	2575	2384	0.014065	0.019513	E20	4	3819	-1.39	-0.142	yqhE	b3012	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1895	2052	-1.08	-0.035	1603	1732	1973	1667	0.009838	0.014954	G20	4	3820	-1.52	-0.182	yqhG	b3013	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
172	140	1.00	0.000	70	54	156	62	0.000367	0.001183	I20	4	3821	-1.00	0.000	yqhH	b3014	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
771	657	1.17	0.070	517	465	714	491	0.002896	0.005412	K20	4	3822	-1.80	-0.256	b3015	b3015	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1466	1280	1.15	0.059	1063	1051	1373	1057	0.006237	0.010404	M20	4	3823	-1.67	-0.222	ygiR	b3016	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1409	775	1.82	0.259	1590	1683	1092	1636	0.009656	0.008274	F14	1	1203	1.17	0.067	sufI	b3017	suppressor of ftsI	Cell processes	phenotype; Not classified
1956	2258	-1.15	-0.062	4296	4603	2107	4450	0.026256	0.015969	C16	2	2074	1.64	0.216	plsC	b3018	1-acyl-sn-glycerol-3-phosphate acyltransferase	Fatty acid and phospholipid metabolism	"enzyme; Macromolecule synthesis, modification: Phospholipids"
12412	12057	1.03	0.013	21550	16484	12234	19017	0.112212	0.092708	G9	1	1572	1.21	0.083	parC	b3019	DNA topoisomerase IV subunit A	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1711	965	1.77	0.249	1148	1188	1338	1168	0.006892	0.010140	O5	3	1752	-1.47	-0.168	b3020	b3020	putative transport periplasmic protein	Putative transport proteins	putative transport; Not classified
1034	901	1.15	0.059	1183	1353	967	1268	0.007484	0.007331	O20	4	3824	1.02	0.009	b3021	b3021	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1324	1065	1.24	0.095	1106	928	1195	1017	0.006001	0.009053	A22	4	3825	-1.51	-0.179	b3022	b3022	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
481	345	1.00	0.000	482	396	413	439	0.002588	0.003129	C22	4	3826	-1.04	-0.018	b3023	b3023	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1599	1528	1.05	0.020	1859	1909	1564	1884	0.011118	0.011849	E22	4	3827	-1.07	-0.028	ygiW	b3024	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
130	75	1.00	0.000	432	350	103	391	0.002305	0.000777	K17	3	262	1.00	0.000	ygiX	b3025	putative 2-component transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
117870	98488	1.20	0.078	107795	93905	108179	100850	0.595086	0.819752	M17	3	263	-1.38	-0.139	ygiY	b3026	putative 2-component sensor protein	Putative regulatory proteins	putative regulator; Not classified
3921	3813	1.03	0.012	1775	1596	3867	1685	0.009944	0.029302	G22	4	3828	-2.95	-0.469	b3027	b3027	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3147	3063	1.03	0.012	3621	3500	3105	3561	0.021012	0.023529	F15	4	2651	-1.12	-0.049	mdaB	b3028	modulator of drug activity B	Cell processes	phenotype; Not classified
1195	1169	1.02	0.010	1331	1519	1182	1425	0.008409	0.008959	I22	4	3829	-1.07	-0.028	ygiN	b3029	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2215	1951	1.14	0.055	3029	3049	2083	3039	0.017933	0.015784	I9	1	1573	1.14	0.055	parE	b3030	DNA topoisomerase IV subunit B	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
634	696	-1.10	-0.041	272	506	665	389	0.002296	0.005040	K22	4	3830	-1.68	-0.225	yqiA	b3031	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1118	1032	1.08	0.035	4152	3247	1075	3699	0.021829	0.008147	C21	1	82	2.68	0.428	icc	b3032	regulator of lacZ	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
759	543	1.40	0.145	1149	908	651	1028	0.006068	0.004934	P15	3	2560	1.23	0.090	yqiB	b3033	putative enzyme	Putative enzymes	putative enzyme; Not classified
3406	3474	-1.02	-0.009	5003	5053	3440	5028	0.029669	0.026070	M22	4	3831	1.14	0.056	yqiE	b3034	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2617	2182	1.20	0.079	3747	3630	2399	3688	0.021763	0.018183	H14	1	1204	1.20	0.078	tolC	b3035	outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes	Cell processes	putative membrane; Cell division
894	1108	-1.24	-0.093	1055	661	1001	858	0.005062	0.007585	O22	4	3832	-1.50	-0.176	ygiA	b3036	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1414	1464	-1.04	-0.015	1293	1259	1439	1276	0.007531	0.010907	P10	2	3833	-1.45	-0.161	ygiB	b3037	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
711	577	1.23	0.091	694	299	644	496	0.002929	0.004881	B17	3	2561	-1.63	-0.211	ygiC	b3038	putative synthetase/amidase	Putative enzymes	putative enzyme; Not classified
2004	2299	-1.15	-0.060	1426	1642	2152	1534	0.009051	0.016305	C24	4	3834	-1.80	-0.256	ygiD	b3039	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3070	3067	1.00	0.000	3288	3741	3069	3514	0.020736	0.023253	E24	4	3835	-1.12	-0.050	ygiE	b3040	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1053	912	1.15	0.063	1430	1774	982	1602	0.009453	0.007445	J11	1	2349	1.27	0.104	ribB	b3041	"3,4 dihydroxy-2-butanone-4-phosphate synthase"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Riboflavin"
1361	1560	-1.15	-0.059	955	821	1460	888	0.005240	0.011067	G24	4	3836	-2.11	-0.325	b3042	b3042	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
63	155	-1.00	0.000	5	163	109	84	0.000497	0.000828	C10	2	514	-1.00	0.000	ygiL	b3043	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
17911	20578	-1.15	-0.060	18132	25256	19244	21694	0.128011	0.145827	I23	4	381	-1.14	-0.057	yi21_5	b3044	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1168	1131	1.03	0.014	1107	1261	1149	1184	0.006986	0.008708	K23	4	382	-1.25	-0.096	yi22_5	b3045	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
545	260	1.09	0.037	604	380	402	492	0.002905	0.003047	E10	2	515	-1.02	-0.007	yqiG	b3046	putative membrane protein	putative membrane protein	putative membrane; Not classified
2374	2624	-1.11	-0.044	1907	2185	2499	2046	0.012074	0.018938	G10	2	516	-1.57	-0.196	yqiH	b3047	putative membrane protein	putative membrane protein	putative membrane; Not classified
261	347	-1.00	0.000	238	153	304	196	0.001154	0.002303	I24	4	3837	-1.00	0.000	yqiI	b3048	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2489	2332	1.07	0.028	4850	4446	2410	4648	0.027428	0.018265	I10	2	517	1.50	0.177	glgS	b3049	"glycogen biosynthesis, rpoS dependent"	Cell processes	"putative enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)"
330	300	1.00	0.000	366	53	315	209	0.001236	0.002388	D17	3	2562	-1.00	0.000	b3050	b3050	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
2388	2365	1.01	0.004	4810	3220	2376	4015	0.023693	0.018007	G12	3	620	1.32	0.119	b3051	b3051	putative membrane protein	putative membrane protein	putative membrane; Not classified
1647	1393	1.18	0.073	2056	1519	1520	1787	0.010547	0.011519	F17	3	2563	-1.09	-0.038	b3052	b3052	putative kinase	Putative enzymes	putative enzyme; Not classified
313	254	1.00	0.000	227	712	283	469	0.002769	0.002148	A7	3	1753	1.00	0.000	glnE	b3053	adenylylating enzyme for glutamine synthetase	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
1198	1273	-1.06	-0.026	1430	1463	1235	1446	0.008535	0.009361	K24	4	3838	-1.10	-0.040	ygiF	b3054	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1183	1315	-1.11	-0.046	2393	3305	1249	2849	0.016810	0.009464	M24	4	3839	1.78	0.250	ygiM	b3055	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1310	1242	1.05	0.023	1287	1492	1276	1389	0.008198	0.009670	C7	3	1754	-1.18	-0.072	cca	b3056	tRNA nucleotidyl transferase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
1556	1425	1.09	0.038	2162	1891	1490	2027	0.011959	0.011294	J14	1	1205	1.06	0.025	bacA	b3057	bacitracin resistance; possibly phosphorylates undecaprenol	Putative transport proteins	putative transport; Drug/analog sensitivity
1141	1026	1.11	0.046	1049	1399	1084	1224	0.007223	0.008213	O24	4	3840	-1.14	-0.056	ygiG	b3058	putative kinase	Putative enzymes	putative enzyme; Not classified
6635	6150	1.08	0.033	11093	8610	6393	9852	0.058131	0.048441	B1	1	3841	1.20	0.079	ygiH	b3059	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3072	3341	-1.09	-0.036	4730	4244	3207	4487	0.026478	0.024298	O17	3	264	1.09	0.037	ygiP	b3060	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
1539	1070	1.44	0.158	1297	1115	1304	1206	0.007116	0.009884	H24	3	1436	-1.39	-0.143	ttdA	b3061	"L-tartrate dehydratase, subunit A"	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
896	1123	-1.25	-0.098	760	511	1010	635	0.003748	0.007650	J24	3	1437	-2.04	-0.310	ttdB	b3062	"L-tartrate dehydratase, subunit B"	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
3185	3172	1.00	0.002	3643	3181	3178	3412	0.020134	0.024086	D1	1	3842	-1.20	-0.078	ygjE	b3063	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1412	644	2.19	0.341	962	824	1028	893	0.005268	0.007788	E7	3	1755	-1.48	-0.170	ygjD	b3064	putative O-sialoglycoprotein endopeptidase	Putative enzymes	putative enzyme; Not classified
750	322	1.50	0.176	4195	3962	536	4079	0.024066	0.004064	G7	3	1756	5.92	0.772	rpsU	b3065	30S ribosomal subunit protein S21	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
1643	1439	1.14	0.058	2247	1983	1541	2115	0.012480	0.011678	K9	1	1574	1.07	0.029	dnaG	b3066	DNA biosynthesis; DNA primase	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
4116	4629	-1.12	-0.051	6820	6854	4372	6837	0.040343	0.033131	O3	2	1648	1.22	0.086	rpoD	b3067	"RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures"	Regulatory function	factor; Global regulatory functions
1885	1294	1.46	0.163	4113	4196	1589	4154	0.024513	0.012044	F1	1	3843	2.04	0.309	ygjF	b3068	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3462	3270	1.06	0.025	5318	5159	3366	5239	0.030912	0.025504	H1	1	3844	1.21	0.084	yqjH	b3070	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
42050	43789	-1.04	-0.018	27563	28132	42920	27847	0.164319	0.325234	J1	1	3845	-1.98	-0.297	yqjI	b3071	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3077	2899	1.06	0.026	3992	3816	2988	3904	0.023037	0.022645	L14	1	1206	1.02	0.007	aer	b3072	"aerotaxis sensor receptor, flavoprotein"	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
3355	2684	1.25	0.097	5355	4707	3020	5031	0.029686	0.022882	H17	3	2564	1.30	0.113	ygjG	b3073	probable ornithine aminotransferase	Amino acid biosynthesis	putative enzyme; Amino acid biosynthesis: Arginine
2622	2330	1.13	0.051	4304	2373	2476	3339	0.019701	0.018760	I7	3	1757	1.05	0.021	ygjH	b3074	putative tRNA synthetase	Putative enzymes	putative enzyme; Not classified
3874	3648	1.06	0.026	3984	3617	3761	3800	0.022426	0.028501	E21	1	83	-1.27	-0.104	ebgR	b3075	regulator of ebg operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
569	549	1.04	0.016	343	192	559	267	0.001577	0.004234	G21	1	84	-1.41	-0.150	ebgA	b3076	"evolved beta-D-galactosidase, alpha subunit; cryptic gene"	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
343	447	-1.00	0.000	546	576	395	561	0.003311	0.002994	I21	1	85	1.10	0.043	ebgC	b3077	"evolved beta-D-galactosidase, beta subunit; cryptic gene"	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
3310	2491	1.33	0.123	4553	2285	2900	3419	0.020174	0.021977	J17	3	2565	-1.09	-0.037	ygjI	b3078	putative oxidoreductase	"Hypothetical, unclassified, unknown"	orf; Not classified
7994	8089	-1.01	-0.005	5810	5201	8041	5505	0.032486	0.060936	L1	1	3846	-1.88	-0.273	ygjJ	b3079	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
837456	594417	1.41	0.149	544365	504725	715937	524545	3.095184	5.425195	N1	1	3847	-1.75	-0.244	ygjK	b3080	putative isomerase	Putative enzymes	putative enzyme; Not classified
1588	1429	1.11	0.046	1896	2365	1508	2131	0.012573	0.011430	L17	3	2566	1.10	0.041	ygjL	b3081	putative NADPH dehydrogenase	"Hypothetical, unclassified, unknown"	orf; Not classified
24426	24058	1.02	0.007	8929	6438	24242	7684	0.045340	0.183699	B12	2	3848	-4.05	-0.608	ygjM	b3082	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
638	658	-1.03	-0.013	725	621	648	673	0.003971	0.004913	B3	1	3849	-1.24	-0.092	ygjN	b3083	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1623	1668	-1.03	-0.012	2617	2192	1646	2404	0.014188	0.012470	D3	1	3850	1.14	0.056	ygjO	b3084	putative enzyme	Putative enzymes	putative enzyme; Not classified
719	521	1.38	0.140	611	747	620	679	0.004006	0.004696	F3	1	3851	-1.17	-0.069	ygjP	b3085	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2857	2761	1.04	0.015	4000	4078	2809	4039	0.023833	0.021285	H3	1	3852	1.12	0.049	ygjQ	b3086	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3268	3095	1.06	0.024	2722	2617	3181	2670	0.015754	0.024107	J3	1	3853	-1.53	-0.185	ygjR	b3087	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2406	2283	1.05	0.023	3588	3350	2345	3469	0.020470	0.017766	L3	1	3854	1.15	0.062	ygjT	b3088	putative transport protein	Putative transport proteins	putative transport; Not classified
3147	2649	1.19	0.075	3289	2702	2898	2995	0.017675	0.021961	D13	3	1010	-1.24	-0.094	ygjU	b3089	putative transport protein	Putative transport proteins	putative transport; Not classified
2684	2340	1.15	0.059	5279	4651	2512	4965	0.029297	0.019035	N3	1	3855	1.54	0.187	ygjV	b3090	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2334	2297	1.02	0.007	2775	1955	2315	2365	0.013956	0.017543	K21	1	86	-1.26	-0.099	uxaA	b3091	altronate hydrolase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1206	1015	1.19	0.075	1554	974	1111	1264	0.007460	0.008417	M21	1	87	-1.13	-0.052	uxaC	b3092	uronate isomerase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
2167	2948	-1.36	-0.134	3195	2546	2557	2870	0.016937	0.019379	L9	1	806	-1.14	-0.059	exuT	b3093	transport of hexuronates	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
524	656	-1.25	-0.098	1101	935	590	1018	0.006009	0.004471	O21	1	88	1.34	0.128	exuR	b3094	"negative regulator of exu regulon, exuT, uxaAC, and uxuB"	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
1784	1714	1.04	0.017	2230	1652	1749	1941	0.011454	0.013254	P3	1	3856	-1.16	-0.063	yqjA	b3095	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
623	404	1.25	0.095	765	735	514	750	0.004426	0.003892	B5	1	3857	1.14	0.056	yqjB	b3096	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3851	3013	1.28	0.107	5928	4464	3432	5196	0.030659	0.026005	D5	1	3858	1.18	0.072	yqjC	b3097	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
591	596	-1.01	-0.004	2567	1869	593	2218	0.013088	0.004496	F5	1	3859	2.91	0.464	yqjD	b3098	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
10651	9883	1.08	0.033	21993	13514	10267	17753	0.104757	0.077801	H5	1	3860	1.35	0.129	yqjE	b3099	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2104	2057	1.02	0.010	1833	1447	2080	1640	0.009676	0.015765	J5	1	3861	-1.63	-0.212	b3100	b3100	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2264	2118	1.07	0.029	1321	904	2191	1113	0.006565	0.016601	L5	1	3862	-2.53	-0.403	yqjF	b3101	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1240	992	1.25	0.097	1117	984	1116	1050	0.006198	0.008457	N17	3	2567	-1.36	-0.135	yqjG	b3102	putative transferase	Putative enzymes	putative enzyme; Not classified
902	754	1.20	0.078	571	659	828	615	0.003630	0.006275	L24	3	1438	-1.73	-0.238	yhaH	b3103	putative cytochrome	Putative enzymes	putative carrier; Not classified
250	233	1.00	0.000	199	112	242	156	0.000918	0.001830	N24	3	1439	-1.00	0.000	yhaI	b3104	putative cytochrome	Putative enzymes	putative carrier; Not classified
649	480	1.30	0.113	1287	1064	564	1175	0.006935	0.004276	A19	3	265	1.62	0.210	yhaJ	b3105	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
471	392	1.00	0.000	761	828	432	795	0.004689	0.003270	N5	1	3863	1.43	0.156	yhaK	b3106	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1176	1158	1.02	0.007	4556	4692	1167	4624	0.027286	0.008844	P5	1	3864	3.09	0.489	yhaL	b3107	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
100	106	-1.00	0.000	277	245	103	261	0.001538	0.000779	B7	1	3865	1.00	0.000	yhaM	b3108	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
232	296	-1.00	0.000	198	409	264	303	0.001790	0.002000	D7	1	3866	-1.00	0.000	yhaN	b3109	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1964	2099	-1.07	-0.029	1852	2165	2031	2009	0.011853	0.015394	C19	3	266	-1.30	-0.114	yhaO	b3110	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
2282	1902	1.20	0.079	1801	1309	2092	1555	0.009173	0.015853	F7	1	3867	-1.73	-0.238	yhaP	b3111	putative L-serine dehydratase	Putative enzymes	putative enzyme; Not classified
1925	1693	1.14	0.056	901	828	1809	864	0.005101	0.013710	H7	1	3868	-2.69	-0.429	yhaQ	b3112	putative L-serine dehydratase	Putative enzymes	putative enzyme; Not classified
685	836	-1.22	-0.087	608	629	760	618	0.003650	0.005760	J7	1	3869	-1.58	-0.198	yhaR	b3113	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1248	1194	1.04	0.019	1618	1442	1221	1530	0.009028	0.009253	L7	1	3870	-1.02	-0.011	tdcE	b3114	probable formate acetyltransferase 3	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Anaerobic respiration"
1810	1699	1.07	0.027	1204	1130	1754	1167	0.006885	0.013293	N4	2	1440	-1.93	-0.286	tdcD	b3115	putative kinase	Putative enzymes	putative enzyme; Not classified
260	163	1.00	0.000	449	262	211	355	0.002097	0.001602	N9	1	807	1.00	0.000	tdcC	b3116	"anaerobically inducible L-threonine, L-serine permease"	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
460	313	1.00	0.000	238	309	386	274	0.001615	0.002927	C4	1	1930	-1.00	0.000	tdcB	b3117	"threonine dehydratase, catabolic"	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
459	555	-1.11	-0.045	552	225	507	388	0.002291	0.003842	E4	1	1931	-1.28	-0.107	tdcA	b3118	transcriptional activator of tdc operon	Regulatory function	regulator; Degradation of small molecules: Amino acids
191	106	1.00	0.000	103	83	149	93	0.000550	0.001126	G4	1	1932	-1.00	0.000	tdcR	b3119	threonine dehydratase operon activator protein	Regulatory function	regulator; Degradation of small molecules: Amino acids
79	109	-1.00	0.000	130	129	94	129	0.000764	0.000714	N7	1	3871	1.00	0.000	yhaB	b3120	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
718	733	-1.02	-0.009	685	719	725	702	0.004142	0.005497	P7	1	3872	-1.33	-0.123	yhaC	b3121	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
128	67	1.00	0.000	119	222	97	170	0.001006	0.000736	B9	1	3873	1.00	0.000	b3122	b3122	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1369	1153	1.19	0.075	1967	1360	1261	1664	0.009818	0.009555	D9	1	3874	1.03	0.012	yhaD	b3124	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
657	641	1.02	0.011	1207	1015	649	1111	0.006554	0.004917	P17	3	2568	1.33	0.125	yhaE	b3125	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
81	186	-1.00	0.000	116	192	133	154	0.000909	0.001011	F9	1	3875	-1.00	0.000	yhaF	b3126	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5456	5202	1.05	0.021	16912	15598	5329	16255	0.095917	0.040380	A23	1	89	2.38	0.376	yhaU	b3127	putative transport protein	Putative transport proteins	putative transport; Not classified
2583	2596	-1.01	-0.002	1762	1914	2589	1838	0.010846	0.019619	B19	3	2569	-1.81	-0.257	yhaG	b3128	putative hydrolase	Putative enzymes	putative enzyme; Not classified
2207	2550	-1.16	-0.063	3172	3653	2378	3412	0.020135	0.018022	K7	3	1758	1.12	0.048	sohA	b3129	putative protease; htrA suppressor protein	Putative enzymes	putative enzyme; Not classified
6851	4970	1.38	0.139	7638	9120	5911	8379	0.049442	0.044790	H9	1	3876	1.10	0.043	yhaV	b3130	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5265	5150	1.02	0.010	4890	4728	5208	4809	0.028377	0.039463	G4	4	2220	-1.39	-0.143	agaR	b3131	putative DEOR-type transcriptional regulator of aga operon	Putative regulatory proteins	putative regulator; Not classified
3259	2793	1.17	0.067	9733	9173	3026	9453	0.055778	0.022930	C23	1	90	2.43	0.386	agaZ	b3132	putative tagatose 6-phosphate kinase 2	Putative enzymes	putative enzyme; Not classified
3484	2944	1.18	0.073	2825	2679	3214	2752	0.016238	0.024355	I4	4	2221	-1.50	-0.176	agaV	b3133	"PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA)"	Transport and binding proteins	enzyme; Central intermediary metabolism: Amino sugars
3620	3731	-1.03	-0.013	5936	5269	3675	5602	0.033058	0.027851	K4	4	2222	1.19	0.074	agaW	b3134	PTS system N-acetylgalactosameine-specific IIC component 2	Transport and binding proteins	enzyme; Central intermediary metabolism: Amino sugars
414	373	1.00	0.000	537	439	393	488	0.002879	0.002981	M4	4	2223	-1.00	0.000	agaA	b3135	putative N-acetylgalactosamine-6-phosphate deacetylase	Putative enzymes	putative enzyme; Not classified
2215	2605	-1.18	-0.070	4649	4071	2410	4360	0.025729	0.018261	O4	4	2224	1.41	0.149	agaS	b3136	putative tagatose-6-phosphate aldose/ketose isomerase	Putative enzymes	putative enzyme; Not classified
463	840	-1.68	-0.226	598	839	652	719	0.004241	0.004937	A6	4	2225	-1.16	-0.066	agaY	b3137	tagatose-bisphosphate aldolase 2	Putative enzymes	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
527	507	1.04	0.017	496	545	517	521	0.003072	0.003917	C6	4	2226	-1.27	-0.105	agaB	b3138	"PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA)"	Transport and binding proteins	enzyme; Central intermediary metabolism: Amino sugars
3640	4023	-1.11	-0.043	3644	4564	3831	4104	0.024215	0.029033	E6	4	2227	-1.20	-0.079	agaC	b3139	PTS system N-acetylgalactosamine-specific IIC component 1	Transport and binding proteins	enzyme; Central intermediary metabolism: Amino sugars
3051	3737	-1.22	-0.088	2590	2917	3394	2754	0.016248	0.025721	G6	4	2228	-1.58	-0.199	agaD	b3140	"PTS system, N-acetylglucosamine enzyme IID component 1"	Transport and binding proteins	enzyme; Central intermediary metabolism: Amino sugars
3072	2929	1.05	0.021	2105	2890	3000	2497	0.014736	0.022736	I6	4	2229	-1.54	-0.188	agaI	b3141	putative galactosamine-6-phosphate isomerase	Putative enzymes	putative enzyme; Not classified
22	197	-1.00	0.000	-85	328	109	122	0.000718	0.000827	K10	2	518	-1.00	0.000	yraH	b3142	putative fimbrial-like protein	Putative cell structure	putative structure; Not classified
62	127	-1.00	0.000	342	191	95	266	0.001572	0.000717	L2	2	1254	1.00	0.000	yraI	b3143	putative chaperone	Putative factors	putative factor; Not classified
740	744	-1.01	-0.002	705	741	742	723	0.004268	0.005621	M10	2	519	-1.32	-0.120	yraJ	b3144	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
389	450	-1.00	0.000	60	46	420	53	0.000314	0.003182	O10	2	520	-1.06	-0.026	yraK	b3145	putative fimbrial protein	"Hypothetical, unclassified, unknown"	orf; Not classified
2234	1894	1.18	0.072	5130	5097	2064	5114	0.030174	0.015643	J9	1	3877	1.93	0.285	yraL	b3146	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5193	5506	-1.06	-0.025	14003	13618	5349	13810	0.081491	0.040536	B2	4	1441	2.01	0.303	yraM	b3147	putative glycosylase	Putative enzymes	putative enzyme; Not classified
424	241	1.00	0.000	432	370	332	401	0.002367	0.002518	L9	1	3878	-1.00	0.000	yraN	b3148	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
627	452	1.25	0.099	823	732	540	777	0.004587	0.004092	N9	1	3879	1.12	0.050	yraO	b3149	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
580	444	1.16	0.065	548	667	512	607	0.003583	0.003880	N14	1	1207	-1.08	-0.035	yraP	b3150	putative periplasmic protein	Putative transport proteins	putative transport; Not classified
7377	5725	1.29	0.110	4675	3999	6551	4337	0.025593	0.049642	P9	1	3880	-1.94	-0.288	yraQ	b3151	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
410	405	1.00	0.000	168	108	407	138	0.000816	0.003085	B11	1	3881	-1.03	-0.012	yraR	b3152	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2797	2698	1.04	0.016	1511	1219	2748	1365	0.008054	0.020822	D11	1	3882	-2.59	-0.413	yhbO	b3153	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7624	7884	-1.03	-0.015	7883	8381	7754	8132	0.047983	0.058761	F11	1	3883	-1.22	-0.088	yhbP	b3154	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
764	1001	-1.31	-0.117	758	982	883	870	0.005133	0.006690	H11	1	3884	-1.30	-0.115	yhbQ	b3155	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
443	345	1.00	0.000	596	512	394	554	0.003268	0.002987	J11	1	3885	1.09	0.037	yhbS	b3156	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
518	704	-1.36	-0.133	1082	1107	611	1094	0.006457	0.004627	L11	1	3886	1.40	0.145	yhbT	b3157	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
623	268	1.25	0.095	500	272	446	386	0.002278	0.003376	M7	3	1759	-1.13	-0.051	yhbU	b3158	putative collagenase	"Hypothetical, unclassified, unknown"	orf; Not classified
713	502	1.42	0.153	1479	1359	608	1419	0.008372	0.004606	N11	1	3887	1.82	0.260	yhbV	b3159	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
607	712	-1.17	-0.069	874	974	659	924	0.005451	0.004996	D19	3	2570	1.09	0.038	yhbW	b3160	putative enzyme	Putative enzymes	putative enzyme; Not classified
82	129	-1.00	0.000	347	326	105	337	0.001987	0.000799	P9	1	808	1.00	0.000	mtr	b3161	tryptophan-specific transport protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
23740	20702	1.15	0.059	10683	10602	22221	10642	0.062798	0.168386	A5	2	1649	-2.68	-0.428	deaD	b3162	inducible ATP-independent RNA helicase	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
1853	1682	1.10	0.042	2379	2380	1768	2379	0.014039	0.013397	E19	3	267	1.05	0.020	yhbM	b3163	putative control proteins	Putative regulatory proteins	putative regulator; Not classified
11547	10155	1.14	0.056	20506	20578	10851	20542	0.121212	0.082226	C5	2	1650	1.47	0.169	pnp	b3164	polynucleotide phosphorylase; cytidylate kinase activity	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
3387	3186	1.06	0.027	4702	4003	3287	4352	0.025682	0.024905	O7	3	1760	1.03	0.013	rpsO	b3165	30S ribosomal subunit protein S15	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
6550	6577	-1.00	-0.002	6384	5934	6563	6159	0.036343	0.049735	A9	3	1761	-1.37	-0.136	truB	b3166	tRNA pseudouridine 5S synthase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
31623	31354	1.01	0.004	28267	20085	31489	24176	0.142654	0.238616	C9	3	1762	-1.67	-0.223	rbfA	b3167	ribosome-binding factor A	"Translation, post-translational modification"	factor; Proteins - translation and modification
6835	6862	-1.00	-0.002	5062	4291	6849	4677	0.027595	0.051897	E9	3	1763	-1.88	-0.274	infB	b3168	protein chain initiation factor IF-2	"Translation, post-translational modification"	factor; Proteins - translation and modification
4691	4521	1.04	0.016	6385	6130	4606	6258	0.036924	0.034906	E5	2	1651	1.06	0.024	nusA	b3169	transcription pausing; L factor	"Transcription, RNA processing and degradation"	"factor; RNA synthesis, modification, DNA transcription"
2159	1944	1.11	0.046	1355	1409	2051	1382	0.008155	0.015543	P11	1	3888	-1.91	-0.280	yhbC	b3170	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3225	2645	1.22	0.086	3806	2294	2935	3050	0.017996	0.022238	I4	1	1933	-1.24	-0.092	argG	b3172	argininosuccinate synthetase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Arginine
2008	1828	1.10	0.041	2462	1872	1918	2167	0.012786	0.014537	F19	3	2571	-1.14	-0.056	yhbX	b3173	putative alkaline phosphatase I	Putative enzymes	putative enzyme; Not classified
2220	2324	-1.05	-0.020	9874	10187	2272	10030	0.059186	0.017219	B11	1	809	3.44	0.536	secG	b3175	protein export - membrane protein	Transport and binding proteins	"transport; Protein, peptide secretion"
6821	7492	-1.10	-0.041	8650	11111	7156	9881	0.058303	0.054229	K6	4	2230	1.08	0.031	mrsA	b3176	similar to phosphoglucomutases and phosphomannomutases	Putative enzymes	putative enzyme; Central intermediary metabolism: Miscellaneous glucose metabolism
937	846	1.11	0.045	1129	809	891	969	0.005716	0.006754	L11	1	2350	-1.18	-0.072	folP	b3177	"7,8-dihydropteroate synthase"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Folic acid"
5462	5581	-1.02	-0.009	12292	12366	5522	12329	0.072750	0.041843	P14	1	1208	1.74	0.240	hflB	b3178	"degrades sigma32, integral membrane peptidase, cell division protein"	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
864	794	1.09	0.037	2098	2335	829	2217	0.013079	0.006284	B16	1	1209	2.08	0.318	ftsJ	b3179	cell division protein	Cell processes	phenotype; Cell division
330	666	-1.33	-0.125	603	464	498	534	0.003149	0.003773	B13	1	3889	-1.20	-0.078	yhbY	b3180	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
465	273	1.00	0.000	932	906	369	919	0.005425	0.002795	G9	3	1764	1.81	0.257	greA	b3181	transcription elongation factor: cleaves 3' nucleotide of paused mRNA	Regulatory function	regulator; Proteins - translation and modification
6451	6738	-1.04	-0.019	11383	12147	6594	11765	0.069425	0.049970	A12	2	521	1.39	0.143	dacB	b3182	"D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin-binding protein 4"	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
4027	3987	1.01	0.004	4277	5263	4007	4770	0.028148	0.030363	H15	4	2652	-1.08	-0.033	yhbZ	b3183	putative GTP-binding factor	Putative factors	putative factor; Not classified
1861	1649	1.13	0.052	1589	2371	1755	1980	0.011684	0.013301	D13	1	3890	-1.14	-0.056	yhbE	b3184	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2081	1326	1.57	0.196	3125	1764	1703	2444	0.014423	0.012906	I9	3	1765	1.12	0.048	rpmA	b3185	50S ribosomal subunit protein L27	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
4276	2993	1.43	0.155	7067	5612	3634	6340	0.037409	0.027539	K9	3	1766	1.36	0.133	rplU	b3186	50S ribosomal subunit protein L21	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
1482	1420	1.04	0.018	1531	1434	1451	1483	0.008748	0.010995	N11	1	2351	-1.26	-0.099	ispB	b3187	octaprenyl diphosphate synthase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
398	392	1.00	0.000	1066	719	395	893	0.005269	0.002993	E23	1	91	1.76	0.245	nlp	b3188	regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
1588	1814	-1.14	-0.058	2670	3229	1701	2949	0.017404	0.012890	C12	2	522	1.35	0.130	murA	b3189	first step in murein biosynthesis;UDP-N-glucosamine 1-carboxyvinyltransferase	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
1152	903	1.28	0.106	916	767	1028	842	0.004966	0.007789	F13	1	3891	-1.57	-0.195	yrbA	b3190	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
510	330	1.02	0.008	337	346	420	341	0.002013	0.003182	H13	1	3892	-1.06	-0.026	yrbB	b3191	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
651	429	1.30	0.115	809	236	540	522	0.003083	0.004090	J13	1	3893	-1.33	-0.123	yrbC	b3192	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1742	681	2.56	0.408	892	611	1212	751	0.004434	0.009181	L13	1	3894	-2.07	-0.316	yrbD	b3193	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
645	612	1.05	0.023	933	628	628	780	0.004605	0.004762	N13	1	3895	-1.03	-0.015	yrbE	b3194	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
833	604	1.38	0.140	1265	1126	719	1195	0.007053	0.005445	F13	3	1011	1.30	0.112	yrbF	b3195	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
700	580	1.21	0.082	564	620	640	592	0.003493	0.004853	P13	1	3896	-1.39	-0.143	yrbG	b3196	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2364	1983	1.19	0.076	2308	1542	2173	1925	0.011361	0.016470	H19	3	2572	-1.45	-0.161	yrbH	b3197	putative isomerase	Putative enzymes	putative enzyme; Not classified
1119	1023	1.09	0.039	1586	1236	1071	1411	0.008326	0.008118	B15	1	3897	1.03	0.011	yrbI	b3198	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
685	590	1.16	0.065	481	610	637	546	0.003219	0.004830	D15	1	3898	-1.50	-0.176	yrbK	b3199	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4231	4526	-1.07	-0.029	3030	4390	4378	3710	0.021892	0.033179	F15	1	3899	-1.52	-0.181	yhbN	b3200	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
689	795	-1.15	-0.062	962	1194	742	1078	0.006361	0.005620	H13	3	1012	1.13	0.054	yhbG	b3201	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
938	1221	-1.30	-0.114	1348	1524	1079	1436	0.008474	0.008178	E15	2	155	1.04	0.015	rpoN	b3202	"RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulation"	Regulatory function	regulator; Global regulatory functions
1120	1365	-1.22	-0.086	2734	2535	1243	2634	0.015544	0.009417	H15	1	3900	1.65	0.218	yhbH	b3203	probable sigma-54 modulation protein	Putative regulatory proteins	putative regulator; Global regulatory functions
42876	40481	1.06	0.025	104835	100485	41679	102660	0.605765	0.315832	D11	1	810	1.92	0.283	ptsN	b3204	"phosphotransferase system enzyme IIA, regulates N metabolism"	Transport and binding proteins	"enzyme; Transport of small molecules: Amino acids, amines"
1664	1655	1.01	0.003	1611	1762	1659	1686	0.009951	0.012575	J15	1	3901	-1.26	-0.102	yhbJ	b3205	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4402	4437	-1.01	-0.003	5252	5121	4419	5186	0.030603	0.033489	F11	1	811	-1.09	-0.039	ptsO	b3206	"phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr"	Transport and binding proteins	transport; Transport of small molecules: Other
1152	1203	-1.04	-0.019	997	949	1177	973	0.005741	0.008923	L15	1	3902	-1.55	-0.192	yrbL	b3207	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1010	879	1.15	0.060	1831	2142	945	1986	0.011722	0.007157	E12	2	523	1.64	0.214	mtgA	b3208	putative peptidoglycan enzyme	Putative enzymes	putative enzyme; Not classified
1386	967	1.43	0.156	1567	2086	1176	1827	0.010779	0.008915	N15	1	3903	1.21	0.082	yhbL	b3209	sigma cross-reacting protein 27A (SCRP-27A)	Putative factors	putative factor; Not classified
116	311	-1.00	0.000	157	375	213	266	0.001571	0.001616	G15	2	156	-1.00	0.000	arcB	b3210	"aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA"	Regulatory function	enzyme; Global regulatory functions
473	534	-1.07	-0.028	948	659	503	804	0.004744	0.003814	P15	1	3904	1.24	0.095	yhcC	b3211	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1174	917	1.28	0.107	1378	1668	1045	1523	0.008987	0.007920	M6	4	2231	1.13	0.055	gltB	b3212	"glutamate synthase, large subunit"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
7274	6776	1.07	0.031	15879	17924	7025	16901	0.099731	0.053236	O6	4	2232	1.87	0.273	gltD	b3213	"glutamate synthase, small subunit"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
1132	1097	1.03	0.014	987	977	1115	982	0.005797	0.008448	A8	4	2233	-1.46	-0.164	gltF	b3214	"regulator of gltBDF operon, induction of Ntr enzymes"	Regulatory function	"regulator; Central intermediary metabolism: Pool, multipurpose conversions"
263	371	-1.00	0.000	520	408	317	464	0.002740	0.002402	N2	2	1255	1.00	0.000	yhcA	b3215	putative chaperone	Putative factors	putative factor; Not classified
2641	2419	1.09	0.038	4107	3342	2530	3724	0.021977	0.019169	B17	1	3905	1.15	0.059	yhcD	b3216	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
517	420	1.03	0.014	330	418	469	374	0.002205	0.003551	D17	1	3906	-1.18	-0.073	yhcE	b3217	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7052	7267	-1.03	-0.013	2456	1812	7160	2134	0.012594	0.054254	M23	4	383	-4.31	-0.634	trs5_10	b3218	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
585	393	1.17	0.068	679	673	489	676	0.003988	0.003704	F17	1	3907	1.08	0.032	yhcF	b3219	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
662	897	-1.35	-0.132	784	1095	780	939	0.005543	0.005908	H17	1	3908	-1.07	-0.028	yhcG	b3220	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
216	187	1.00	0.000	387	592	201	490	0.002890	0.001524	J17	1	3909	1.00	0.000	yhcH	b3221	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
484	478	1.00	0.000	621	540	481	581	0.003425	0.003646	J19	3	2573	-1.06	-0.027	yhcI	b3222	putative NAGC-like transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1901	1784	1.07	0.027	4181	3914	1842	4048	0.023884	0.013962	L19	3	2574	1.71	0.233	yhcJ	b3223	putative enzyme	Putative enzymes	putative enzyme; Not classified
1057	2668	-2.53	-0.402	3120	4917	1862	4018	0.023710	0.014112	G12	2	524	1.68	0.225	nanT	b3224	sialic acid transporter	Transport and binding proteins	"transport; Murein sacculus, peptidoglycan"
715	940	-1.32	-0.119	2486	2261	827	2373	0.014005	0.006269	I12	2	525	2.23	0.349	nanA	b3225	N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12?	Carbon compound catabolism	enzyme; Surface polysaccharides & antigens
742	501	1.48	0.170	654	417	622	536	0.003160	0.004710	G19	3	268	-1.49	-0.173	yhcK	b3226	putative FADA-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
829	632	1.31	0.118	1104	917	730	1010	0.005962	0.005533	J13	3	1013	1.08	0.032	yhcL	b3227	putative transport protein	Putative transport proteins	putative transport; Not classified
1230	1270	-1.03	-0.014	1889	1667	1250	1778	0.010492	0.009473	I15	2	157	1.11	0.044	sspB	b3228	stringent starvation protein B	Regulatory function	regulator; Global regulatory functions
1756	1879	-1.07	-0.030	5103	5145	1817	5124	0.030235	0.013772	K15	2	158	2.20	0.342	sspA	b3229	regulator of transcription; stringent starvation protein A	Regulatory function	regulator; Global regulatory functions
5727	4531	1.26	0.102	8438	8179	5129	8308	0.049026	0.038865	M9	3	1767	1.26	0.101	rpsI	b3230	30S ribosomal subunit protein S9	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
3683	2699	1.36	0.135	3470	3030	3191	3250	0.019175	0.024180	O9	3	1768	-1.26	-0.101	rplM	b3231	50S ribosomal subunit protein L13	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
1525	1346	1.13	0.054	1608	2003	1436	1806	0.010654	0.010880	L17	1	3910	-1.02	-0.009	yhcM	b3232	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1385	1032	1.34	0.128	2504	1731	1209	2117	0.012493	0.009160	N17	1	3911	1.36	0.135	yhcB	b3233	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1947	1675	1.16	0.065	2019	912	1811	1466	0.008648	0.013725	A11	3	1769	-1.59	-0.201	degQ	b3234	serine endoprotease	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
1217	-6	2.43	0.386	2036	1096	606	1566	0.009241	0.004589	C11	3	1770	2.01	0.304	degS	b3235	protease	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
9054	10987	-1.21	-0.084	14836	15475	10020	15156	0.089429	0.075932	D2	4	1442	1.18	0.071	mdh	b3236	malate dehydrogenase	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
352	387	-1.00	0.000	711	377	369	544	0.003210	0.002799	K4	1	1934	1.07	0.029	argR	b3237	repressor of arg regulon; cer-mediated site specific recombination	Regulatory function	regulator; Amino acid biosynthesis: Arginine
1158	966	1.20	0.079	1715	1590	1062	1652	0.009749	0.008045	P17	1	3912	1.21	0.083	yhcN	b3238	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
741	726	1.02	0.009	484	733	734	609	0.003591	0.005559	B19	1	3913	-1.55	-0.190	yhcO	b3239	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
785	583	1.35	0.129	714	629	684	672	0.003963	0.005183	D19	1	3914	-1.31	-0.117	yhcP	b3240	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
665	524	1.27	0.103	633	385	594	509	0.003004	0.004503	N19	3	2575	-1.50	-0.176	yhcQ	b3241	putative membrane protein	putative membrane protein	putative membrane; Not classified
60	110	-1.00	0.000	84	-25	85	29	0.000172	0.000645	F19	1	3915	-1.00	0.000	yhcR	b3242	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
18653	18355	1.02	0.007	22542	16949	18504	19745	0.116512	0.140220	I19	3	269	-1.20	-0.080	yhcS	b3243	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
1110	1283	-1.16	-0.063	1142	1549	1197	1345	0.007939	0.009069	H19	1	3916	-1.14	-0.058	tldD	b3244	suppresses inhibitory activity of CsrA	Putative regulatory proteins	phenotype; Not classified
1195	1216	-1.02	-0.008	1757	1833	1206	1795	0.010591	0.009137	J19	1	3917	1.16	0.064	yhdP	b3245	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1331	1108	1.20	0.080	2089	1599	1219	1844	0.010879	0.009240	L19	1	3918	1.18	0.071	yhdR	b3246	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1273	1362	-1.07	-0.029	1724	2198	1317	1961	0.011571	0.009983	D16	1	1210	1.16	0.064	cafA	b3247	bundles of cytoplasmic filaments	Cell processes	structural component; Cell division
792	746	1.06	0.026	2047	1637	769	1842	0.010870	0.005827	N19	1	3919	1.87	0.271	yhdE	b3248	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
409	439	-1.00	0.000	563	641	424	602	0.003555	0.003211	K12	2	526	1.11	0.044	mreD	b3249	rod shape-determining protein	Cell processes	"structural component; Murein sacculus, peptidoglycan"
1820	1981	-1.09	-0.037	1237	1414	1900	1326	0.007822	0.014398	M12	2	527	-1.84	-0.265	mreC	b3250	rod shape-determining protein	Cell processes	"structural component; Murein sacculus, peptidoglycan"
4630	4716	-1.02	-0.008	3536	5813	4673	4675	0.027583	0.035413	O12	2	528	-1.28	-0.109	mreB	b3251	"regulator of ftsI, penicillin binding protein 3, septation function"	Cell processes	phenotype; Cell division
3469	3572	-1.03	-0.013	3984	4381	3520	4182	0.024678	0.026676	P19	1	3920	-1.08	-0.034	yhdA	b3252	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1308	1016	1.29	0.110	960	699	1162	829	0.004893	0.008804	P19	3	2576	-1.80	-0.255	yhdH	b3253	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
763	523	1.46	0.164	329	331	643	330	0.001948	0.004875	B21	1	3921	-1.63	-0.211	b3254	b3254	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1546	1432	1.08	0.033	1327	1775	1489	1551	0.009152	0.011285	E16	2	2075	-1.23	-0.091	accB	b3255	"acetylCoA carboxylase, BCCP subunit; carrier of biotin"	Fatty acid and phospholipid metabolism	"carrier; Biosynthesis of cofactors, carriers: biotin carboxyl carrier protein (BCCP)"
1332	1261	1.06	0.024	2157	1942	1297	2050	0.012095	0.009825	G16	2	2076	1.23	0.090	accC	b3256	"acetyl CoA carboxylase, biotin carboxylase subunit"	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
4763	4556	1.05	0.019	9062	7763	4660	8412	0.049640	0.035309	D21	1	3922	1.41	0.148	yhdT	b3257	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2033	2073	-1.02	-0.008	1713	1599	2053	1656	0.009772	0.015556	H11	1	812	-1.59	-0.202	panF	b3258	sodium/pantothenate symporter	Transport and binding proteins	transport; Transport of small molecules: Cations
4705	3813	1.23	0.091	4596	3803	4259	4199	0.024780	0.032273	E11	3	1771	-1.30	-0.115	prmA	b3259	methylase for 50S ribosomal subunit protein L11	"Translation, post-translational modification"	"enzyme; Ribosomal proteins - synthesis, modification"
1440	1345	1.07	0.030	812	676	1393	744	0.004389	0.010554	B21	3	2577	-2.40	-0.381	yhdG	b3260	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
1305	1413	-1.08	-0.035	1282	1019	1359	1150	0.006788	0.010297	M9	1	1575	-1.52	-0.181	fis	b3261	site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription	Regulatory function	"factor; DNA - replication, repair, restriction/modification"
2680	2596	1.03	0.014	1810	1109	2638	1459	0.008611	0.019988	D21	3	2578	-2.32	-0.366	yhdJ	b3262	putative methyltransferase	Putative enzymes	putative enzyme; Not classified
391	369	1.00	0.000	257	112	380	185	0.001091	0.002880	F21	1	3923	-1.00	0.000	yhdU	b3263	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
167	247	-1.00	0.000	276	245	207	260	0.001537	0.001566	F16	1	1211	-1.00	0.000	envR	b3264	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
564	733	-1.30	-0.113	1010	1264	648	1137	0.006709	0.004914	A14	2	529	1.37	0.135	acrE	b3265	transmembrane protein affects septum formation and cell membrane permeability	Cell structure	membrane; Inner membrane
1326	1017	1.30	0.115	2746	2184	1172	2465	0.014543	0.008877	H16	1	1212	1.64	0.214	acrF	b3266	integral transmembrane protein; acridine resistance	Cell processes	membrane; Drug/analog sensitivity
452	351	1.00	0.000	185	294	402	239	0.001413	0.003045	H21	1	3924	-1.02	-0.006	yhdV	b3267	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1109	923	1.20	0.080	1162	940	1016	1051	0.006201	0.007698	L13	3	1014	-1.24	-0.094	yhdW	b3268	putative periplasmic binding transport protein	Putative transport proteins	putative transport; Not classified
2254	1887	1.19	0.077	2733	2620	2070	2676	0.015793	0.015689	N13	3	1015	1.01	0.003	yhdX	b3269	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
2078	2024	1.03	0.011	2413	2282	2051	2347	0.013850	0.015542	P13	3	1016	-1.12	-0.050	yhdY	b3270	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1823	1351	1.35	0.130	2828	2689	1587	2758	0.016277	0.012027	B15	3	1017	1.35	0.131	yhdZ	b3271	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
1735	1688	1.03	0.012	2597	2763	1711	2680	0.015815	0.012968	F21	3	2579	1.22	0.086	yrdA	b3279	putative transferase	Putative enzymes	putative enzyme; Not classified
847	734	1.15	0.062	865	451	791	658	0.003882	0.005991	J21	1	3925	-1.54	-0.188	yrdB	b3280	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1152	981	1.17	0.070	1178	1329	1066	1254	0.007397	0.008081	M4	1	1935	-1.09	-0.038	aroE	b3281	dehydroshikimate reductase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Chorismate
818	910	-1.11	-0.046	846	1035	864	940	0.005549	0.006546	L21	1	3926	-1.18	-0.072	yrdC	b3282	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1154	1239	-1.07	-0.031	1530	1457	1196	1493	0.008811	0.009066	O9	1	1576	-1.03	-0.012	yrdD	b3283	putative DNA topoisomerase	Putative enzymes	putative enzyme; Not classified
1160	964	1.20	0.081	2406	1864	1062	2135	0.012598	0.008048	N21	1	3927	1.57	0.195	smg	b3284	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2206	2196	1.00	0.002	3321	2522	2201	2922	0.017239	0.016677	P21	1	3928	1.03	0.014	smf_2	b3285	"orf, fragment 2"	"Hypothetical, unclassified, unknown"	orf; Unknown
471	219	1.00	0.000	427	355	345	391	0.002309	0.002613	B23	1	3929	-1.00	0.000	smf_1	b3286	"orf, fragment 1"	"Hypothetical, unclassified, unknown"	orf; Unknown
1581	1396	1.13	0.054	1812	1345	1489	1579	0.009316	0.011280	G11	3	1772	-1.21	-0.083	def	b3287	peptide deformylase	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
835	752	1.11	0.046	1258	1079	793	1168	0.006895	0.006011	I11	3	1773	1.15	0.060	fmt	b3288	10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
400	283	1.00	0.000	463	382	341	422	0.002493	0.002586	D23	1	3930	-1.00	0.000	sun	b3289	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
794	1062	-1.34	-0.126	1485	1745	928	1615	0.009531	0.007031	J11	1	813	1.36	0.132	trkA	b3290	transport of potassium	Transport and binding proteins	transport; Transport of small molecules: Cations
375	278	1.00	0.000	852	1045	327	948	0.005596	0.002475	J16	1	1213	1.87	0.271	mscL	b3291	mechanosensitive channel	Transport and binding proteins	transport; Transport of small molecules: Other
1601	1348	1.19	0.075	4399	3978	1475	4189	0.024715	0.011174	K19	3	270	2.21	0.345	yhdM	b3292	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
971	916	1.06	0.025	677	726	944	702	0.004141	0.007150	F23	1	3931	-1.73	-0.237	yhdN	b3293	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6064	5624	1.08	0.033	5733	7350	5844	6542	0.038601	0.044285	K11	3	1774	-1.15	-0.060	rplQ	b3294	50S ribosomal subunit protein L17	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
6470	6562	-1.01	-0.006	12966	12329	6516	12647	0.074628	0.049375	G5	2	1652	1.51	0.179	rpoA	b3295	"RNA polymerase, alpha subunit"	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
3759	3009	1.25	0.097	3791	2966	3384	3378	0.019934	0.025643	M11	3	1775	-1.29	-0.109	rpsD	b3296	30S ribosomal subunit protein S4	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
3983	2566	1.55	0.191	4559	3235	3274	3897	0.022996	0.024812	O11	3	1776	-1.08	-0.033	rpsK	b3297	30S ribosomal subunit protein S11	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
7797	7586	1.03	0.012	9484	8559	7691	9022	0.053234	0.058283	A13	3	1777	-1.09	-0.039	rpsM	b3298	30S ribosomal subunit protein S13	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
1623	1120	1.45	0.161	3848	3427	1372	3638	0.021464	0.010393	C13	3	1778	2.07	0.315	rpmJ	b3299	50S ribosomal subunit protein L36	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
8697	7853	1.11	0.044	10235	9093	8275	9664	0.057026	0.062705	D15	3	1018	-1.10	-0.041	prlA	b3300	putative ATPase subunit of translocase	Putative transport proteins	putative transport; Not classified
18340	18559	-1.01	-0.005	33184	32016	18450	32600	0.192361	0.139807	E13	3	1779	1.38	0.139	rplO	b3301	50S ribosomal subunit protein L15	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
2592	1499	1.73	0.238	6792	4263	2046	5527	0.032614	0.015500	G13	3	1780	2.10	0.323	rpmD	b3302	50S ribosomal subunit protein L30	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
5303	3089	1.72	0.235	7081	4066	4196	5573	0.032887	0.031795	I13	3	1781	1.03	0.015	rpsE	b3303	30S ribosomal subunit protein S5	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
2697	2061	1.31	0.117	2223	1645	2379	1934	0.011413	0.018028	K13	3	1782	-1.58	-0.199	rplR	b3304	50S ribosomal subunit protein L18	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
11715	11061	1.06	0.025	15645	13629	11388	14637	0.086370	0.086294	M13	3	1783	1.00	0.000	rplF	b3305	50S ribosomal subunit protein L6	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
2235	2126	1.05	0.022	2742	2799	2180	2770	0.016347	0.016523	O13	3	1784	-1.01	-0.005	rpsH	b3306	"30S ribosomal subunit protein S8, and regulator"	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
6490	6247	1.04	0.017	14531	13250	6368	13890	0.081963	0.048257	A15	3	1785	1.70	0.230	rpsN	b3307	30S ribosomal subunit protein S14	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
4422	3758	1.18	0.071	6949	5889	4090	6419	0.037877	0.030991	C15	3	1786	1.22	0.087	rplE	b3308	50S ribosomal subunit protein L5	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
5101	3394	1.50	0.177	3104	2549	4247	2827	0.016681	0.032184	E15	3	1787	-1.93	-0.285	rplX	b3309	50S ribosomal subunit protein L24	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
4276	3581	1.19	0.077	8828	5228	3929	7028	0.041471	0.029771	G15	3	1788	1.39	0.144	rplN	b3310	50S ribosomal subunit protein L14	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
4608	4478	1.03	0.012	9007	7698	4543	8352	0.049285	0.034425	I15	3	1789	1.43	0.156	rpsQ	b3311	30S ribosomal subunit protein S17	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
9107	8483	1.07	0.031	15183	12728	8795	13955	0.082347	0.066648	K15	3	1790	1.24	0.092	rpmC	b3312	50S ribosomal subunit protein L29	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
11973	10757	1.11	0.047	13402	12138	11365	12770	0.075354	0.086120	M15	3	1791	-1.14	-0.058	rplP	b3313	50S ribosomal subunit protein L16	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
8770	8959	-1.02	-0.009	11048	10401	8865	10724	0.063282	0.067174	O15	3	1792	-1.06	-0.026	rpsC	b3314	30S ribosomal subunit protein S3	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
2316	1910	1.21	0.084	4394	3662	2113	4028	0.023765	0.016012	A17	3	1793	1.48	0.171	rplV	b3315	50S ribosomal subunit protein L22	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
4740	4437	1.07	0.029	6082	5604	4588	5843	0.034478	0.034770	C17	3	1794	-1.01	-0.004	rpsS	b3316	30S ribosomal subunit protein S19	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
7859	6576	1.20	0.077	11128	9387	7217	10257	0.060525	0.054692	E17	3	1795	1.11	0.044	rplB	b3317	50S ribosomal subunit protein L2	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
5425	4185	1.30	0.113	4995	5538	4805	5267	0.031078	0.036409	G17	3	1796	-1.17	-0.069	rplW	b3318	50S ribosomal subunit protein L23	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
7500	6746	1.11	0.046	14099	13284	7123	13691	0.080789	0.053976	I17	3	1797	1.50	0.175	rplD	b3319	"50S ribosomal subunit protein L4, regulates expression of S10 operon"	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
4395	4005	1.10	0.040	5559	5420	4200	5490	0.032392	0.031825	K17	3	1798	1.02	0.008	rplC	b3320	50S ribosomal subunit protein L3	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
4616	4222	1.09	0.039	4553	3289	4419	3921	0.023137	0.033485	M17	3	1799	-1.45	-0.161	rpsJ	b3321	30S ribosomal subunit protein S10	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
2688	2687	1.00	0.000	1666	904	2687	1285	0.007582	0.020365	A11	1	1577	-2.69	-0.429	pinO	b3322	calcium-binding protein required for initiation of chromosome replication	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
14564	12423	1.17	0.069	4745	3839	13493	4292	0.025325	0.102249	H23	1	3932	-4.04	-0.606	yheD	b3323	putative export protein A for general secretion pathway (GSP)	Putative transport proteins	putative transport; Not classified
4257	4189	1.02	0.007	2103	1445	4223	1774	0.010467	0.031998	J23	1	3933	-3.06	-0.485	yheE	b3324	putative general secretion pathway for protein export (GSP)	Putative transport proteins	putative transport; Not classified
1740	1656	1.05	0.021	904	1068	1698	986	0.005817	0.012868	L23	1	3934	-2.21	-0.345	yheF	b3325	putative general protein secretion protein	Putative transport proteins	putative transport; Not classified
623	431	1.25	0.095	867	838	527	853	0.005033	0.003992	N23	1	3935	1.26	0.101	yheG	b3326	putative general secretion pathway for protein export (GSP) (TYPE II TRAFFIC WARDEN ATPASE)	Putative transport proteins	putative transport; Not classified
1616	1563	1.03	0.014	1129	1279	1590	1204	0.007103	0.012046	L11	1	814	-1.70	-0.229	hofF	b3327	putative general protein secretion protein	Putative transport proteins	putative transport; Not classified
933	996	-1.07	-0.029	392	619	965	505	0.002982	0.007309	N11	1	815	-2.44	-0.387	hofG	b3328	putative general protein secretion protein	Putative transport proteins	putative transport; Not classified
4709	4657	1.01	0.005	10223	10565	4683	10394	0.061331	0.035489	P11	1	816	1.73	0.238	hofH	b3329	putative general protein secretion protein	Putative transport proteins	putative transport; Not classified
5084	5827	-1.15	-0.059	6900	9399	5456	8149	0.048086	0.041341	P23	1	3936	1.16	0.066	yheH	b3330	putative export protein for general secretion pathway (GSP)	Putative transport proteins	putative transport; Not classified
18342	18403	-1.00	-0.001	18362	19174	18373	18768	0.110744	0.139223	B1	2	3937	-1.26	-0.099	yheI	b3331	putative export protein I for general secretion pathway (GSP)	Putative transport proteins	putative transport; Not classified
3207	3330	-1.04	-0.016	4479	4676	3268	4578	0.027012	0.024768	D1	2	3938	1.09	0.038	yheJ	b3332	putative export protein J for general secretion pathway (GSP)	Putative transport proteins	putative transport; Not classified
2316	3389	-1.46	-0.165	5172	5818	2852	5495	0.032425	0.021615	F1	2	3939	1.50	0.176	yheK	b3333	putative general protein secretion protein	Putative transport proteins	putative transport; Not classified
379	489	-1.00	0.000	238	383	434	310	0.001832	0.003291	B13	1	817	-1.10	-0.040	pshM	b3334	putative general secretion	Putative transport proteins	putative transport; Not classified
5732	8185	-1.43	-0.155	3206	4296	6958	3751	0.022133	0.052729	O17	3	1800	-2.38	-0.377	hofD	b3335	"leader peptidase, integral membrane protein"	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
1545	1388	1.11	0.046	4005	2970	1466	3488	0.020579	0.011112	D13	1	818	1.85	0.268	bfr	b3336	"bacterioferrin, an iron storage homoprotein"	Transport and binding proteins	carrier; Transport of small molecules: Cations
2268	2606	-1.15	-0.060	4098	3946	2437	4022	0.023734	0.018466	H1	2	3940	1.29	0.109	yheA	b3337	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2987	2689	1.11	0.046	4447	4312	2838	4379	0.025840	0.021506	H21	3	2580	1.20	0.080	yheB	b3338	putative enzyme	Putative enzymes	putative enzyme; Not classified
44806	40884	1.10	0.040	66311	59477	42845	62894	0.371119	0.324669	A19	3	1801	1.14	0.058	tufA	b3339	protein chain elongation factor EF-Tu (duplicate of tufB)	"Translation, post-translational modification"	factor; Proteins - translation and modification
12402	13645	-1.10	-0.041	14551	14704	13024	14627	0.086312	0.098691	C19	3	1802	-1.14	-0.058	fusA	b3340	GTP-binding protein chain elongation factor EF-G	"Translation, post-translational modification"	factor; Proteins - translation and modification
6151	4432	1.39	0.142	5058	4882	5292	4970	0.029327	0.040099	E19	3	1803	-1.37	-0.136	rpsG	b3341	"30S ribosomal subunit protein S7, initiates assembly"	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
10540	9380	1.12	0.051	9858	11329	9960	10593	0.062508	0.075471	G19	3	1804	-1.21	-0.082	rpsL	b3342	30S ribosomal subunit protein S12	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
2268	2237	1.01	0.006	1954	2996	2252	2475	0.014606	0.017068	J1	2	3941	-1.17	-0.068	yheL	b3343	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
798	1198	-1.50	-0.176	981	1235	998	1108	0.006540	0.007564	L1	2	3942	-1.16	-0.063	yheM	b3344	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
33437	34621	-1.04	-0.015	15126	5598	34029	10362	0.061142	0.257863	N1	2	3943	-4.22	-0.625	yheN	b3345	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7193	8169	-1.14	-0.055	4476	4341	7681	4408	0.026013	0.058203	D12	2	3944	-2.24	-0.350	yheO	b3346	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4483	3438	1.30	0.115	3998	3715	3960	3856	0.022756	0.030011	I19	3	1805	-1.32	-0.120	fkpA	b3347	FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
5212	5071	1.03	0.012	7737	5901	5141	6819	0.040236	0.038960	B3	2	3945	1.03	0.014	slyX	b3348	host factor for lysis of phiX174 infection	"Hypothetical, unclassified, unknown"	orf; Unknown function
2752	2154	1.28	0.106	3303	3095	2453	3199	0.018875	0.018589	K19	3	1806	1.02	0.007	slyD	b3349	FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
2822	2452	1.15	0.061	7568	5757	2637	6663	0.039314	0.019983	F13	1	819	1.97	0.294	kefB	b3350	K+ efflux; NEM-activable K+/H+ antiporter	Transport and binding proteins	transport; Transport of small molecules: Cations
338	400	-1.00	0.000	300	568	369	434	0.002561	0.002795	D3	2	3946	-1.00	0.000	yheR	b3351	putative NAD(P)H oxidoreductase	Putative enzymes	putative enzyme; Not classified
3123	2817	1.11	0.045	4577	4379	2970	4478	0.026424	0.022506	F3	2	3947	1.17	0.070	yheS	b3352	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
690	575	1.20	0.079	734	910	633	822	0.004850	0.004793	H3	2	3948	1.01	0.005	yheT	b3353	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
317	449	-1.00	0.000	427	683	383	555	0.003275	0.002902	J3	2	3949	1.09	0.038	yheU	b3354	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
744	1224	-1.64	-0.216	752	1079	984	916	0.005404	0.007455	C8	4	2234	-1.38	-0.140	prkB	b3355	probable phosphoribulokinase	Putative enzymes	putative enzyme; Central intermediary metabolism: Miscellaneous glucose metabolism
806	1120	-1.39	-0.143	1731	2257	963	1994	0.011764	0.007298	L3	2	3950	1.61	0.207	yhfA	b3356	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1192	1217	-1.02	-0.009	1362	1454	1205	1408	0.008307	0.009129	M15	2	159	-1.10	-0.041	crp	b3357	cyclic AMP receptor protein	Regulatory function	regulator; Global regulatory functions
921	1067	-1.16	-0.064	1126	1012	994	1069	0.006309	0.007531	I12	3	621	-1.19	-0.077	yhfK	b3358	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
11487	10422	1.10	0.042	18588	13764	10954	16176	0.095450	0.083010	O4	1	1936	1.15	0.061	argD	b3359	acetylornithine delta-aminotransferase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Arginine
2183	2058	1.06	0.026	2352	2813	2120	2582	0.015237	0.016068	P11	1	2352	-1.05	-0.023	pabA	b3360	"p-aminobenzoate synthetase, component II"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Folic acid"
3967	3921	1.01	0.005	8311	8064	3944	8188	0.048315	0.029885	L16	1	1214	1.62	0.209	fic	b3361	"induced in stationary phase, recognized by rpoS, affects cell division"	Cell processes	phenotype; Cell division
-42	278	-1.00	0.000	-218	477	118	130	0.000764	0.000896	N3	2	3951	-1.00	0.000	yhfG	b3362	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1142	272	2.28	0.359	1098	199	707	648	0.003826	0.005358	M19	3	1807	-1.40	-0.146	ppiA	b3363	peptidyl-prolyl cis-trans isomerase A (rotamase A)	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
1219	1177	1.04	0.015	3163	2672	1198	2918	0.017216	0.009077	F15	3	1019	1.90	0.278	yhfC	b3364	putative transport	Putative transport proteins	putative transport; Not classified
3494	3359	1.04	0.017	3259	4688	3427	3973	0.023444	0.025966	F2	4	1443	-1.11	-0.044	nirB	b3365	nitrite reductase (NAD(P)H) subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
503	540	-1.07	-0.031	757	845	521	801	0.004725	0.003949	H2	4	1444	1.20	0.078	nirD	b3366	nitrite reductase (NAD(P)H) subunit	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
3570	3730	-1.04	-0.019	4621	7207	3650	5914	0.034896	0.027661	J2	4	1445	1.26	0.101	nirC	b3367	nitrite reductase activity	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
838	761	1.10	0.042	633	731	799	682	0.004025	0.006056	B13	1	2353	-1.50	-0.177	cysG	b3368	uroporphyrinogen III methylase; sirohaeme biosynthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
592	713	-1.20	-0.081	665	734	653	699	0.004126	0.004946	P3	2	3952	-1.20	-0.079	yhfL	b3369	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1418	1310	1.08	0.034	2113	1989	1364	2051	0.012103	0.010337	H15	3	1020	1.17	0.069	yhfM	b3370	putative amino acid/amine transport protein	Putative transport proteins	putative transport; Not classified
689	566	1.22	0.086	902	740	627	821	0.004842	0.004752	J15	3	1021	1.02	0.008	yhfN	b3371	putative transport protein	Putative transport proteins	putative transport; Not classified
1759	1986	-1.13	-0.053	2896	2828	1872	2862	0.016888	0.014189	B5	2	3953	1.19	0.076	yhfO	b3372	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4881	5191	-1.06	-0.027	4375	5718	5036	5046	0.029776	0.038160	D5	2	3954	-1.28	-0.108	yhfP	b3373	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
895	586	1.53	0.184	627	515	741	571	0.003369	0.005614	J21	3	2581	-1.67	-0.222	yhfQ	b3374	putative kinase	Putative enzymes	putative enzyme; Not classified
979	1061	-1.08	-0.035	1168	1304	1020	1236	0.007293	0.007731	M19	3	271	-1.06	-0.025	yhfR	b3375	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
886	841	1.05	0.022	593	747	864	670	0.003955	0.006544	F5	2	3955	-1.65	-0.219	yhfS	b3376	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1742	2827	-1.62	-0.210	866	1287	2284	1077	0.006354	0.017311	H5	2	3956	-2.72	-0.435	yhfT	b3377	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1180	1319	-1.12	-0.049	1093	901	1249	997	0.005885	0.009468	J5	2	3957	-1.61	-0.207	yhfU	b3378	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
453	319	1.00	0.000	849	691	386	770	0.004545	0.002925	L21	3	2582	1.51	0.180	yhfV	b3379	putative hydrolase	Putative enzymes	putative enzyme; Not classified
376	391	-1.00	0.000	939	737	383	838	0.004947	0.002904	N21	3	2583	1.65	0.217	yhfW	b3380	putative mutase	Putative enzymes	putative enzyme; Not classified
557	840	-1.51	-0.179	554	963	698	758	0.004474	0.005291	L5	2	3958	-1.18	-0.073	yhfX	b3381	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3981	3570	1.12	0.047	8477	8699	3776	8588	0.050675	0.028610	N5	2	3959	1.77	0.248	yhfY	b3382	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4029	4690	-1.16	-0.066	5332	6752	4359	6042	0.035652	0.033033	P5	2	3960	1.08	0.033	yhfZ	b3383	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8449	8516	-1.01	-0.003	7804	8474	8483	8139	0.048025	0.064281	O19	3	1808	-1.34	-0.127	trpS	b3384	tryptophan tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
676	688	-1.02	-0.007	2166	1548	682	1857	0.010957	0.005168	G23	1	92	2.12	0.326	gph	b3385	phosphoglycolate phosphatase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
2007	2266	-1.13	-0.053	3802	2869	2136	3336	0.019682	0.016188	L2	4	1446	1.22	0.085	rpe	b3386	D-ribulose-5-phosphate 3-epimerase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway"
864	787	1.10	0.041	845	770	825	808	0.004767	0.006255	C11	1	1578	-1.31	-0.118	dam	b3387	DNA adenine methylase	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
3434	3487	-1.02	-0.007	6323	5857	3461	6090	0.035933	0.026223	E8	4	2235	1.37	0.137	damX	b3388	putative membrane protein; interferes with cell division	Putative factors	putative membrane; Cell division
1954	1798	1.09	0.036	1878	2185	1876	2032	0.011988	0.014218	A6	1	1937	-1.19	-0.074	aroB	b3389	3-dehydroquinate synthase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Chorismate
1128	1007	1.12	0.049	1574	919	1068	1247	0.007355	0.008091	C6	1	1938	-1.10	-0.041	aroK	b3390	shikimate kinase I	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Chorismate
549	668	-1.22	-0.085	1123	958	609	1041	0.006140	0.004613	H13	1	820	1.33	0.124	hofQ	b3391	putative transport portein	Putative transport proteins	putative transport; Not classified
740	823	-1.11	-0.046	2414	2319	781	2367	0.013965	0.005920	B7	2	3961	2.36	0.373	yrfA	b3392	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3867	4075	-1.05	-0.023	3145	4063	3971	3604	0.021266	0.030091	D7	2	3962	-1.42	-0.151	yrfB	b3393	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
339	489	-1.00	0.000	172	319	414	246	0.001450	0.003136	F7	2	3963	-1.05	-0.019	yrfC	b3394	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1693	2255	-1.33	-0.125	1940	2292	1974	2116	0.012487	0.014957	H7	2	3964	-1.20	-0.078	yrfD	b3395	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1071	1060	1.01	0.005	2169	2351	1066	2260	0.013335	0.008074	C14	2	530	1.65	0.218	mrcA	b3396	peptidoglycan synthetase; penicillin-binding protein 1A	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
10138	10144	-1.00	0.000	11008	10852	10141	10930	0.064495	0.076846	J7	2	3965	-1.19	-0.076	yrfE	b3397	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1590	1362	1.17	0.067	1407	1153	1476	1280	0.007551	0.011181	P21	3	2584	-1.48	-0.170	yrfF	b3398	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
3223	2350	1.37	0.137	2003	1429	2786	1716	0.010125	0.021115	B23	3	2585	-2.09	-0.319	yrfG	b3399	putative phosphatase	Putative enzymes	putative enzyme; Not classified
2851	3307	-1.16	-0.065	3710	3777	3079	3744	0.022091	0.023332	L7	2	3966	-1.06	-0.024	yrfH	b3400	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
833	886	-1.06	-0.027	1477	1585	859	1531	0.009036	0.006513	N7	2	3967	1.39	0.142	yrfI	b3401	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
675	621	1.09	0.036	1305	1232	648	1269	0.007486	0.004911	L15	3	1022	1.52	0.183	yhgE	b3402	putative transport	Putative transport proteins	putative transport; Not classified
7423	5860	1.27	0.103	7043	6945	6642	6994	0.041267	0.050329	G8	4	2236	-1.22	-0.086	pckA	b3403	phosphoenolpyruvate carboxykinase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Gluconeogenesis
1199	2052	-1.71	-0.233	1513	1658	1626	1585	0.009355	0.012319	O15	2	160	-1.32	-0.120	envZ	b3404	"protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC"	Regulatory function	enzyme; Global regulatory functions
626	595	1.05	0.022	1199	993	610	1096	0.006467	0.004624	A17	2	161	1.40	0.146	ompR	b3405	"response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis"	Regulatory function	regulator; Global regulatory functions
185	290	-1.00	0.000	163	460	238	312	0.001840	0.001800	I5	2	1653	1.00	0.000	greB	b3406	transcription elongation factor and transcript cleavage	Regulatory function	"regulator; RNA synthesis, modification, DNA transcription"
17708	16363	1.08	0.034	17426	16678	17036	17052	0.100617	0.129093	P7	2	3968	-1.28	-0.108	yhgF	b3407	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1678	1619	1.04	0.016	3416	2631	1648	3024	0.017841	0.012492	J13	1	821	1.43	0.155	feoA	b3408	ferrous iron transport protein A	Transport and binding proteins	transport; Transport of small molecules: Cations
686	597	1.15	0.060	1094	1215	642	1155	0.006812	0.004863	L13	1	822	1.40	0.146	feoB	b3409	ferrous iron transport protein B	Transport and binding proteins	transport; Transport of small molecules: Cations
1098	1531	-1.39	-0.144	2063	2710	1315	2387	0.014083	0.009964	B9	2	3969	1.41	0.150	yhgG	b3410	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1865	2153	-1.15	-0.062	2987	2493	2009	2740	0.016168	0.015221	D9	2	3970	1.06	0.026	yhgA	b3411	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1438	1521	-1.06	-0.024	1077	888	1479	983	0.005798	0.011209	D13	1	2354	-1.93	-0.286	bioH	b3412	biotin biosynthesis; reaction prior to pimeloyl CoA	"Biosynthesis of cofactors, prosthetic groups and carriers"	"putative enzyme; Biosynthesis of cofactors, carriers: Biotin"
465	642	-1.28	-0.108	392	628	554	510	0.003011	0.004195	F9	2	3971	-1.39	-0.144	yhgH	b3413	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2657	2788	-1.05	-0.021	2877	3441	2723	3159	0.018642	0.020631	H9	2	3972	-1.11	-0.044	yhgI	b3414	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1817	1659	1.09	0.039	462	394	1738	428	0.002528	0.013170	N13	1	823	-4.39	-0.642	gntT	b3415	high-affinity transport of gluconate / gluconate permease	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2315	2305	1.00	0.002	4095	3746	2310	3921	0.023134	0.017506	I23	1	93	1.32	0.121	malQ	b3416	4-alpha-glucanotransferase (amylomaltase)	Carbon compound catabolism	enzyme; Degradation of polysaccharides
2660	2609	1.02	0.008	4120	3766	2635	3943	0.023266	0.019967	K23	1	94	1.17	0.066	malP	b3417	maltodextrin phosphorylase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
2827	2648	1.07	0.028	5047	5154	2738	5101	0.030097	0.020746	M23	1	95	1.45	0.162	malT	b3418	positive regulator of mal regulon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
3699	4387	-1.19	-0.074	4457	5536	4043	4996	0.029483	0.030637	J9	2	3973	-1.04	-0.017	yhgJ	b3419	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
802	1110	-1.38	-0.141	1246	1680	956	1463	0.008631	0.007243	L9	2	3974	1.19	0.076	rtcA	b3420	RNA 3'-terminal phosphate cyclase	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
2885	3158	-1.09	-0.039	4672	4521	3022	4597	0.027124	0.022897	N9	2	3975	1.18	0.074	rtcB	b3421	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4003	3618	1.11	0.044	2889	2450	3811	2670	0.015753	0.028877	O19	3	272	-1.83	-0.263	rtcR	b3422	putative 2-component regulator	Putative regulatory proteins	putative regulator; Not classified
885	979	-1.11	-0.044	1702	1892	932	1797	0.010601	0.007063	N2	4	1447	1.50	0.176	glpR	b3423	repressor of the glp operon	Regulatory function	"regulator; Energy metabolism, carbon: Anaerobic respiration"
862	826	1.04	0.019	1934	1355	844	1645	0.009704	0.006395	P2	4	1448	1.52	0.181	glpG	b3424	protein of glp regulon	Energy metabolism	"phenotype; Energy metabolism, carbon: Anaerobic respiration"
4704	4793	-1.02	-0.008	15020	13719	4749	14369	0.084789	0.035984	B4	4	1449	2.36	0.372	glpE	b3425	protein of glp regulon	Energy metabolism	"phenotype; Energy metabolism, carbon: Anaerobic respiration"
4043	4225	-1.05	-0.019	14061	13561	4134	13811	0.081493	0.031326	D4	4	1450	2.60	0.415	glpD	b3426	sn-glycerol-3-phosphate dehydrogenase (aerobic)	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
775	859	-1.11	-0.045	879	1203	817	1041	0.006144	0.006192	P9	2	3976	-1.01	-0.003	yzgL	b3427	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7153	7440	-1.04	-0.017	11287	10770	7296	11029	0.065076	0.055290	E14	2	531	1.18	0.071	glgP	b3428	glycogen phosphorylase	Cell processes	"enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)"
852	657	1.30	0.113	2257	1851	755	2054	0.012118	0.005719	G14	2	532	2.12	0.326	glgA	b3429	glycogen synthase	Cell processes	"enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)"
1449	1623	-1.12	-0.049	2290	2679	1536	2485	0.014660	0.011640	I14	2	533	1.26	0.100	glgC	b3430	glucose-1-phosphate adenylyltransferase	Cell processes	"enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)"
159	127	1.00	0.000	186	390	143	288	0.001701	0.001084	K14	2	534	1.00	0.000	glgX	b3431	"part of glycogen operon, a glycosyl hydrolase, debranching enzyme"	Cell processes	"enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)"
3312	3167	1.05	0.019	4529	4769	3240	4649	0.027434	0.024550	M14	2	535	1.12	0.048	glgB	b3432	"1,4-alpha-glucan branching enzyme"	Cell processes	"enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)"
2521	2001	1.26	0.100	3677	3300	2261	3489	0.020585	0.017134	E6	1	1939	1.20	0.080	asd	b3433	aspartate-semialdehyde dehydrogenase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Lysine
1255	969	1.30	0.112	250	505	1112	377	0.002227	0.008429	B11	2	3977	-2.81	-0.449	yhgN	b3434	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
435	482	-1.00	0.000	788	881	459	835	0.004924	0.003475	P13	1	824	1.42	0.151	gntU_2	b3435	"low-affinity gluconate transport permease protein, fragment 2"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1353	1207	1.12	0.050	2208	2282	1280	2245	0.013247	0.009697	B15	1	825	1.37	0.135	gntU_1	b3436	"low-affinity gluconate transport permease protein, interrupted"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2789	2950	-1.06	-0.024	2458	2578	2870	2518	0.014859	0.021746	I8	4	2237	-1.46	-0.165	gntK	b3437	"gluconokinase 2, thermoresistant"	Carbon compound catabolism	enzyme; Central intermediary metabolism: Miscellaneous glucose metabolism
1487	1506	-1.01	-0.006	1603	1574	1496	1588	0.009373	0.011340	K8	4	2238	-1.21	-0.083	gntR	b3438	regulator of gluconate (gnt) operon	Regulatory function	regulator; Central intermediary metabolism: Entner-Douderoff
274	366	-1.00	0.000	100	331	320	216	0.001272	0.002425	D11	2	3978	-1.00	0.000	yhhW	b3439	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1051	671	1.57	0.195	1482	788	861	1135	0.006698	0.006524	A21	3	273	1.03	0.011	yhhX	b3440	putative regulator	Putative regulatory proteins	putative regulator; Not classified
1956	1850	1.06	0.024	682	900	1903	791	0.004668	0.014421	F11	2	3979	-3.09	-0.490	yhhY	b3441	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1023	1138	-1.11	-0.046	1044	1087	1080	1065	0.006285	0.008185	H11	2	3980	-1.30	-0.115	yhhZ	b3442	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-26	175	-1.00	0.000	-12	107	74	47	0.000279	0.000562	J11	2	3981	-1.00	0.000	yrhA	b3443	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
13503	13761	-1.02	-0.008	15352	12143	13632	13747	0.081119	0.103298	O23	4	384	-1.27	-0.105	insA_6	b3444	IS1 protein InsA	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
1583	1775	-1.12	-0.050	1153	1261	1679	1207	0.007123	0.012722	A2	1	385	-1.79	-0.252	insB_6	b3445	IS1 protein InsB	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
49	80	-1.00	0.000	16	71	65	43	0.000255	0.000490	L11	2	3982	-1.00	0.000	yrhB	b3446	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2593	2602	-1.00	-0.002	4021	3780	2598	3900	0.023014	0.019684	F13	1	2355	1.17	0.068	ggt	b3447	gamma-glutamyltranspeptidase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione"
2167	2239	-1.03	-0.014	1528	1719	2203	1623	0.009579	0.016692	N11	2	3983	-1.74	-0.241	yhhA	b3448	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2373	2520	-1.06	-0.026	2688	2646	2446	2667	0.015737	0.018539	M8	4	2239	-1.18	-0.071	ugpQ	b3449	"glycerophosphodiester phosphodiesterase, cytosolic"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
4983	4461	1.12	0.048	8687	6960	4722	7823	0.046164	0.035780	D15	1	826	1.29	0.111	ugpC	b3450	ATP-binding component of sn-glycerol 3-phosphate transport system	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2163	2172	-1.00	-0.002	3853	3385	2168	3619	0.021355	0.016426	F15	1	827	1.30	0.114	ugpE	b3451	"sn-glycerol 3-phosphate transport system, integral membrane protein"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
288	356	-1.00	0.000	827	627	322	727	0.004290	0.002440	H15	1	828	1.43	0.155	ugpA	b3452	"sn-glycerol 3-phosphate transport system, integral membrane protein"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
602	602	1.00	0.000	1422	1253	602	1337	0.007892	0.004559	J15	1	829	1.73	0.238	ugpB	b3453	sn-glycerol 3-phosphate transport system; periplasmic binding protein	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
32861	27052	1.21	0.084	59027	56465	29957	57746	0.340743	0.227003	L15	1	830	1.50	0.176	livF	b3454	ATP-binding component of leucine transport	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
722	507	1.42	0.154	2004	1654	615	1829	0.010794	0.004657	N15	1	831	2.32	0.365	livG	b3455	ATP-binding component of high-affinity branched-chain amino acid transport system	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
24105	21092	1.14	0.058	29211	28441	22599	28826	0.170092	0.171246	P15	1	832	-1.01	-0.003	livM	b3456	high-affinity branched-chain amino acid transport	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
5584	5106	1.09	0.039	10073	8502	5345	9288	0.054803	0.040503	B17	1	833	1.35	0.131	livH	b3457	high-affinity branched-chain amino acid transport system; membrane component	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
4480	4274	1.05	0.020	7308	5861	4377	6585	0.038855	0.033167	D17	1	834	1.17	0.069	livK	b3458	high-affinity leucine-specific transport system; periplasmic binding protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
10903	11591	-1.06	-0.027	12552	13267	11247	12910	0.076177	0.085226	P11	2	3984	-1.12	-0.049	yhhK	b3459	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
14332	12222	1.17	0.069	42063	34571	13277	38317	0.226096	0.100610	F17	1	835	2.25	0.352	livJ	b3460	high-affinity amino acid transport system; periplasmic binding protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
2498	2223	1.12	0.051	4045	5501	2360	4773	0.028165	0.017885	K5	2	1654	1.57	0.197	rpoH	b3461	"RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatures"	Regulatory function	factor; Global regulatory functions
711	777	-1.09	-0.039	962	1157	744	1059	0.006251	0.005637	N16	1	1215	1.11	0.045	ftsX	b3462	cell division membrane protein	Cell processes	membrane; Cell division
2412	2487	-1.03	-0.013	4999	5124	2450	5062	0.029868	0.018562	P16	1	1216	1.61	0.207	ftsE	b3463	ATP-binding component of a membrane-associated complex involved in cell division	Cell processes	phenotype; Not classified
3148	2977	1.06	0.024	3775	3832	3062	3803	0.022442	0.023206	B18	1	1217	-1.03	-0.015	ftsY	b3464	cell division membrane protein	Cell processes	membrane; Cell division
707	933	-1.32	-0.120	512	577	820	544	0.003213	0.006214	B13	2	3985	-1.93	-0.287	yhhF	b3465	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
132	92	1.00	0.000	100	57	112	79	0.000464	0.000848	D13	2	3986	-1.00	0.000	yhhL	b3466	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
821	671	1.22	0.088	1086	882	746	984	0.005807	0.005652	C21	3	274	1.03	0.012	yhhM	b3467	putative receptor	Putative factors	putative factor; Not classified
1185	995	1.19	0.076	772	554	1090	663	0.003912	0.008259	D23	3	2586	-2.11	-0.324	yhhN	b3468	putative enzyme	Putative enzymes	putative enzyme; Not classified
1175	746	1.57	0.197	1733	2365	960	2049	0.012090	0.007278	N15	3	1023	1.66	0.220	zntA	b3469	zinc-transporting ATPase	Transport and binding proteins	transport; Transport of small molecules: Cations
42	264	-1.00	0.000	-57	21	153	-18	-0.000108	0.001157	F13	2	3987	-1.00	0.000	yhhP	b3470	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7325	7309	1.00	0.001	6156	6116	7317	6136	0.036206	0.055444	H13	2	3988	-1.53	-0.185	yhhQ	b3471	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
234	455	-1.00	0.000	372	401	344	386	0.002280	0.002608	J13	2	3989	-1.00	0.000	b3472	b3472	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3810	3510	1.09	0.036	4316	3782	3660	4049	0.023890	0.027733	P15	3	1024	-1.16	-0.065	yhhS	b3473	putative transport	Putative transport proteins	putative transport; Not classified
423	403	1.00	0.000	386	565	413	475	0.002805	0.003130	L13	2	3990	-1.04	-0.018	yhhT	b3474	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3940	3528	1.12	0.048	3734	3503	3734	3618	0.021351	0.028296	F23	3	2587	-1.33	-0.122	yhhU	b3475	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
329	328	1.00	0.000	744	182	328	463	0.002735	0.002486	H17	1	836	1.00	0.000	nikA	b3476	periplasmic binding protein for nickel	Transport and binding proteins	transport; Transport of small molecules: Cations
706	572	1.23	0.091	1257	1273	639	1265	0.007463	0.004842	J17	1	837	1.54	0.188	nikB	b3477	"transport of nickel, membrane protein"	Transport and binding proteins	transport; Transport of small molecules: Cations
4508	3879	1.16	0.065	12262	11911	4194	12087	0.071319	0.031780	L17	1	838	2.24	0.351	nikC	b3478	"transport of nickel, membrane protein"	Transport and binding proteins	transport; Transport of small molecules: Cations
8282	7648	1.08	0.035	4713	5253	7965	4983	0.029404	0.060359	N17	1	839	-2.05	-0.312	nikD	b3479	ATP-binding protein of nickel transport system	Transport and binding proteins	transport; Transport of small molecules: Cations
1488	1851	-1.24	-0.095	1618	1295	1669	1457	0.008596	0.012650	P17	1	840	-1.47	-0.168	nikE	b3480	ATP-binding protein of nickel transport system	Transport and binding proteins	transport; Transport of small molecules: Cations
315	298	1.00	0.000	313	224	307	269	0.001587	0.002323	N13	2	3991	-1.00	0.000	yhhG	b3481	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2634	2962	-1.12	-0.051	2460	2207	2798	2334	0.013772	0.021203	P13	2	3992	-1.54	-0.187	rhsB	b3482	rhsB protein in rhs element	"Hypothetical, unclassified, unknown"	orf; Transposon-related functions
-103	19	-1.00	0.000	-142	137	-42	-2	-0.000015	-0.000321	B15	2	3993	1.00	0.000	yhhH	b3483	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
14102	13891	1.02	0.007	22887	21989	13997	22438	0.132402	0.106063	E21	3	275	1.25	0.096	yhhI	b3484	putative receptor	Putative factors	putative factor; Not classified
1005	964	1.04	0.018	1434	1296	985	1365	0.008054	0.007461	D15	2	3994	1.08	0.033	yhhJ	b3485	putative transporter	Putative transport proteins	putative transport; Not classified
1810	1211	1.49	0.174	3656	2760	1511	3208	0.018928	0.011447	B17	3	1025	1.65	0.218	yhiH	b3486	"putative ATP-binding component of a transport system, fragment 1"	Putative transport proteins	putative transport; Not classified
1548	1790	-1.16	-0.063	1730	1355	1669	1542	0.009101	0.012646	G21	3	276	-1.39	-0.143	yhiI	b3487	putative membrane protein	putative membrane protein	putative membrane; Not classified
7201	4681	1.54	0.187	4905	5847	5941	5376	0.031720	0.045017	F15	2	3995	-1.42	-0.152	yhiJ	b3488	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
-210	115	-1.00	0.000	-40	283	-48	121	0.000716	-0.000360	H15	2	3996	1.00	0.000	yhiK	b3489	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
18	198	-1.00	0.000	-128	97	108	-16	-0.000093	0.000818	J15	2	3997	-1.00	0.000	yhiL	b3490	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
880	1176	-1.34	-0.126	907	1295	1028	1101	0.006497	0.007787	L15	2	3998	-1.20	-0.079	yhiM	b3491	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
309	598	-1.20	-0.078	403	772	454	588	0.003467	0.003437	N15	2	3999	1.01	0.004	yhiN	b3492	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
852	843	1.01	0.005	1724	1357	848	1540	0.009089	0.006424	B19	1	841	1.41	0.151	pitA	b3493	low-affinity phosphate transport	Transport and binding proteins	transport; Transport of small molecules: Anions
536	683	-1.27	-0.105	745	945	610	845	0.004988	0.004620	P15	2	4000	1.08	0.033	yhiO	b3494	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6707	6096	1.10	0.041	7534	6716	6402	7125	0.042045	0.048510	D18	1	1218	-1.15	-0.062	uspA	b3495	universal stress protein; broad regulatory function?	Cell processes	"putative regulator; Adaptations, atypical conditions"
2720	2865	-1.05	-0.023	6448	6291	2793	6370	0.037585	0.021162	D19	1	842	1.78	0.249	yhiP	b3496	putative transport protein	Putative transport proteins	putative transport; Not classified
222	152	1.00	0.000	-185	311	187	63	0.000371	0.001416	B17	2	4001	-1.00	0.000	yhiQ	b3497	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
13541	13578	-1.00	-0.001	13207	13019	13560	13113	0.077375	0.102751	A21	3	1809	-1.33	-0.123	prlC	b3498	oligopeptidase A	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
642	778	-1.21	-0.084	718	672	710	695	0.004100	0.005381	D17	2	4002	-1.31	-0.118	yhiR	b3499	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2021	2251	-1.11	-0.047	2735	3010	2136	2872	0.016949	0.016185	H13	1	2356	1.05	0.020	gor	b3500	glutathione oxidoreductase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione"
758	971	-1.28	-0.108	1700	1745	865	1723	0.010164	0.006551	F18	1	1219	1.55	0.191	arsR	b3501	transcriptional repressor of chromosomal ars operon	Regulatory function	regulator; Drug/analog sensitivity
466	332	1.00	0.000	392	374	399	383	0.002259	0.003024	H18	1	1220	-1.01	-0.003	arsB	b3502	arsenical pump membrane protein	Cell processes	transport; Drug/analog sensitivity
874	890	-1.02	-0.008	949	708	882	828	0.004888	0.006681	J18	1	1221	-1.37	-0.136	arsC	b3503	arsenate reductase	Cell processes	enzyme; Drug/analog sensitivity
4911	4819	1.02	0.008	7603	7517	4865	7560	0.044609	0.036865	F17	2	4003	1.21	0.083	yhiS	b3504	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
9351	9565	-1.02	-0.010	6372	7052	9458	6712	0.039605	0.071670	C2	1	386	-1.81	-0.258	trs5_11	b3505	IS5 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
630	502	1.25	0.098	1872	1731	566	1801	0.010629	0.004289	O14	2	536	2.48	0.394	slp	b3506	outer membrane protein induced after carbon starvation	Cell structure	membrane; Outer membrane constituents
1074	1173	-1.09	-0.038	1158	1361	1124	1260	0.007432	0.008515	H17	2	4004	-1.15	-0.059	yhiF	b3507	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2312	1921	1.20	0.080	3686	2974	2117	3330	0.019651	0.016038	D17	3	1026	1.23	0.088	yhiD	b3508	putative transport ATPase	Putative transport proteins	putative transport; Not classified
15087	14481	1.04	0.018	30190	30119	14784	30154	0.177932	0.112029	J17	2	4005	1.59	0.201	hdeB	b3509	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6871	7694	-1.12	-0.049	35858	39823	7283	37841	0.223287	0.055186	L17	2	4006	4.05	0.607	hdeA	b3510	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1109	1267	-1.14	-0.058	4109	3470	1188	3789	0.022360	0.009002	N17	2	4007	2.48	0.395	hdeD	b3511	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1903	2148	-1.13	-0.053	3749	4006	2026	3877	0.022880	0.015349	P17	2	4008	1.49	0.173	yhiE	b3512	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3982	3530	1.13	0.052	3558	3340	3756	3449	0.020352	0.028463	L18	1	1222	-1.40	-0.146	yhiU	b3513	putative membrane protein	putative membrane protein	putative membrane; Not classified
328	304	1.00	0.000	187	305	316	246	0.001453	0.002392	N18	1	1223	-1.00	0.000	yhiV	b3514	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1054	1007	1.05	0.020	1483	1424	1031	1454	0.008577	0.007809	I21	3	277	1.10	0.041	yhiW	b3515	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
2622	2290	1.15	0.059	6273	6407	2456	6340	0.037410	0.018612	K21	3	278	2.01	0.303	yhiX	b3516	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
4470	4325	1.03	0.014	19896	17781	4398	18838	0.111159	0.033324	O8	4	2240	3.34	0.523	gadA	b3517	glutamate decarboxylase isozyme	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
5308	5526	-1.04	-0.018	13917	11972	5417	12945	0.076382	0.041049	F4	4	1451	1.86	0.270	yhjA	b3518	putative cytochrome C peroxidase (EC 1.11.1)	Putative enzymes	putative enzyme; Not classified
1594	2001	-1.26	-0.099	1634	1101	1798	1367	0.008067	0.013623	O23	1	96	-1.69	-0.228	treF	b3519	cytoplasmic trehalase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
185	160	1.00	0.000	225	361	172	293	0.001731	0.001306	M21	3	279	1.00	0.000	yhjB	b3520	putative regulator	Putative regulatory proteins	putative regulator; Not classified
818	1002	-1.23	-0.088	2184	1993	910	2089	0.012326	0.006895	O21	3	280	1.79	0.252	yhjC	b3521	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
11074	10856	1.02	0.009	8975	9882	10965	9428	0.055633	0.083091	B19	2	4009	-1.49	-0.174	yhjD	b3522	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2548	1871	1.36	0.134	2921	2773	2209	2847	0.016798	0.016743	F17	3	1027	1.00	0.001	yhjE	b3523	putative transport protein	Putative transport proteins	putative transport; Not classified
1641	1846	-1.13	-0.051	2162	1601	1743	1882	0.011103	0.013212	D19	2	4010	-1.19	-0.075	yhjG	b3524	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3547	3669	-1.03	-0.015	4244	3913	3608	4079	0.024067	0.027339	F19	2	4011	-1.14	-0.055	yhjH	b3525	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7327	7762	-1.06	-0.025	7737	7369	7545	7553	0.044568	0.057172	D2	2	97	-1.28	-0.108	kdgK	b3526	ketodeoxygluconokinase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
3448	3678	-1.07	-0.028	1977	2520	3563	2248	0.013267	0.027001	H19	2	4012	-2.04	-0.309	yhjJ	b3527	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
932	794	1.17	0.070	288	302	863	295	0.001741	0.006538	F19	1	843	-2.18	-0.338	dctA	b3528	uptake of C4-dicarboxylic acids	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
609	736	-1.21	-0.082	414	616	673	515	0.003039	0.005098	J19	2	4013	-1.68	-0.225	yhjK	b3529	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1862	1471	1.27	0.102	2338	1674	1667	2006	0.011837	0.012629	H23	3	2588	-1.07	-0.028	yhjL	b3530	putative oxidoreductase subunit	Putative enzymes	putative enzyme; Not classified
972	692	1.40	0.148	1817	1366	832	1591	0.009389	0.006302	J23	3	2589	1.49	0.173	yhjM	b3531	putative endoglucanase	Putative enzymes	putative enzyme; Not classified
1785	2144	-1.20	-0.079	1087	1180	1964	1134	0.006689	0.014886	L19	2	4014	-2.23	-0.347	yhjN	b3532	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2472	2605	-1.05	-0.023	3101	3152	2539	3126	0.018447	0.019237	N19	2	4015	-1.04	-0.018	yhjOP	b3533	putative cellulose synthase	Putative enzymes	putative enzyme; Not classified
1889	1973	-1.04	-0.019	3143	2647	1931	2895	0.017082	0.014634	P19	2	4016	1.17	0.067	yhjQ	b3534	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2548	2657	-1.04	-0.018	2219	2192	2602	2206	0.013015	0.019720	B21	2	4017	-1.52	-0.180	yhjR	b3535	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2838	2572	1.10	0.043	2734	2326	2705	2530	0.014928	0.020499	C21	3	1810	-1.37	-0.138	yhjS	b3536	putative protease	Putative enzymes	putative enzyme; Not classified
1632	1539	1.06	0.025	1721	1953	1585	1837	0.010840	0.012013	D21	2	4018	-1.11	-0.045	yhjT	b3537	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1392	1334	1.04	0.019	1595	1728	1363	1662	0.009805	0.010329	F21	2	4019	-1.05	-0.023	yhjU	b3538	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1576	887	1.78	0.250	2166	1590	1232	1878	0.011080	0.009333	H17	3	1028	1.19	0.075	yhjV	b3539	putative transporter protein	Putative transport proteins	putative transport; Not classified
947	902	1.05	0.021	628	533	924	580	0.003423	0.007005	H19	1	844	-2.05	-0.311	dppF	b3540	putative ATP-binding component of dipeptide transport system	Transport and binding proteins	"transport; Protein, peptide secretion"
1113	883	1.26	0.101	3159	1887	998	2523	0.014888	0.007566	J19	1	845	1.97	0.294	dppD	b3541	putative ATP-binding component of dipeptide transport system	Transport and binding proteins	"transport; Protein, peptide secretion"
4136	4528	-1.09	-0.039	982	887	4332	934	0.005513	0.032827	L19	1	846	-5.95	-0.775	dppC	b3542	dipeptide transport system permease protein 2	Transport and binding proteins	"transport; Protein, peptide secretion"
587	514	1.14	0.057	376	332	551	354	0.002090	0.004172	N19	1	847	-1.39	-0.143	dppB	b3543	dipeptide transport system permease protein 1	Transport and binding proteins	"transport; Protein, peptide secretion"
6053	5528	1.09	0.039	5640	4660	5791	5150	0.030391	0.043879	P19	1	848	-1.44	-0.160	dppA	b3544	dipeptide transport protein	Transport and binding proteins	"transport; Protein, peptide secretion"
2410	3178	-1.32	-0.120	7136	6127	2794	6631	0.039129	0.021174	H21	2	4020	1.85	0.267	yhjW	b3546	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
74	35	1.00	0.000	275	124	54	200	0.001177	0.000411	P18	1	1224	1.00	0.000	yhjX	b3547	putative resistance protein	Putative transport proteins	putative transport; Drug/analog sensitivity
2875	2587	1.11	0.046	4443	4381	2731	4412	0.026036	0.020695	I16	2	2077	1.26	0.100	yhjY	b3548	putative lipase	Putative enzymes	putative enzyme; Not classified
1479	1325	1.12	0.048	1159	1020	1402	1089	0.006427	0.010624	E11	1	1579	-1.65	-0.218	tag	b3549	"3-methyl-adenine DNA glycosylase I, constitutive"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
9468	9530	-1.01	-0.003	6644	7349	9499	6996	0.041282	0.071983	J21	2	4021	-1.74	-0.241	yiaC	b3550	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3909	3780	1.03	0.015	2133	1726	3844	1929	0.011384	0.029132	J13	1	2357	-2.56	-0.408	bisC	b3551	biotin sulfoxide reductase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Biotin"
1770	1573	1.13	0.051	2135	2830	1671	2482	0.014647	0.012665	A16	2	537	1.16	0.063	yiaD	b3552	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
1808	1548	1.17	0.067	2015	1883	1678	1949	0.011499	0.012717	L23	3	2590	-1.11	-0.044	yiaE	b3553	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
2493	2616	-1.05	-0.021	2822	2952	2554	2887	0.017037	0.019357	L21	2	4022	-1.14	-0.055	yiaF	b3554	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
314	623	-1.25	-0.096	1107	1470	469	1288	0.007602	0.003551	N21	2	4023	2.14	0.331	yiaG	b3555	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1103	847	1.30	0.115	1057	1049	975	1053	0.006213	0.007391	B20	1	1225	-1.19	-0.075	cspA	b3556	"cold shock protein 7.4, transcriptional activator of hns"	Regulatory function	"regulator; Adaptations, atypical conditions"
431	547	-1.09	-0.039	732	1013	489	873	0.005151	0.003702	P21	2	4024	1.39	0.143	yi5A	b3557	IS150 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
87	150	-1.00	0.000	218	407	119	312	0.001844	0.000898	E2	1	387	1.00	0.000	t150	b3558	IS150 putative transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
4537	4461	1.02	0.007	5239	4731	4499	4985	0.029416	0.034089	E21	3	1811	-1.16	-0.064	glyS	b3559	"glycine tRNA synthetase, beta subunit"	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
6818	5701	1.20	0.078	6235	4749	6260	5492	0.032406	0.047435	G21	3	1812	-1.46	-0.165	glyQ	b3560	"glycine tRNA synthetase, alpha subunit"	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
668	711	-1.06	-0.027	706	571	689	639	0.003768	0.005225	B23	2	4025	-1.39	-0.142	yiaH	b3561	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
29	142	-1.00	0.000	-77	171	86	47	0.000275	0.000649	D23	2	4026	-1.00	0.000	yiaA	b3562	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
212	329	-1.00	0.000	-53	167	271	57	0.000337	0.002050	F23	2	4027	-1.00	0.000	yiaB	b3563	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
331	450	-1.00	0.000	346	682	390	514	0.003033	0.002957	C1	2	98	1.01	0.005	xylB	b3564	xylulokinase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
-26	159	-1.00	0.000	-19	411	67	196	0.001158	0.000505	E1	2	99	1.00	0.000	xylA	b3565	D-xylose isomerase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1221	1046	1.17	0.067	2237	2149	1134	2193	0.012940	0.008591	B21	1	849	1.51	0.178	xylF	b3566	xylose binding protein transport system	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1052	1092	-1.04	-0.016	6789	6697	1072	6743	0.039790	0.008121	D21	1	850	4.90	0.690	xylG	b3567	putative ATP-binding protein of xylose transport system	Putative transport proteins	putative transport; Not classified
5244	3755	1.40	0.145	3493	2641	4499	3067	0.018098	0.034093	F21	1	851	-1.88	-0.275	xylH	b3568	"putative xylose transport, membrane component"	Putative transport proteins	putative transport; Not classified
1910	1818	1.05	0.022	3108	3125	1864	3117	0.018390	0.014124	G1	2	100	1.30	0.115	xylR	b3569	putative regulator of xyl operon	Putative regulatory proteins	putative regulator; Degradation of small molecules: Carbon compounds
1856	1858	-1.00	0.000	1262	1690	1857	1476	0.008710	0.014073	H23	2	4028	-1.62	-0.208	bax	b3570	putative ATP-binding protein	"Hypothetical, unclassified, unknown"	orf; Not classified
1090	1343	-1.23	-0.091	1566	1796	1217	1681	0.009919	0.009220	I1	2	101	1.08	0.032	malS	b3571	alpha-amylase	Carbon compound catabolism	enzyme; Degradation of polysaccharides
3030	2683	1.13	0.053	3223	3110	2856	3167	0.018685	0.021644	G6	1	1940	-1.16	-0.064	avtA	b3572	"alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase, transaminase C"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Alanine
1338	1279	1.05	0.020	639	995	1309	817	0.004822	0.009918	J23	2	4029	-2.06	-0.313	yiaI	b3573	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1550	1483	1.05	0.019	2722	2351	1516	2537	0.014968	0.011491	A23	3	281	1.30	0.115	yiaJ	b3574	putative regulator	Putative regulatory proteins	putative regulator; Not classified
2087	1925	1.08	0.035	2112	2201	2006	2157	0.012726	0.015201	N23	3	2591	-1.19	-0.077	yiaK	b3575	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
689	494	1.38	0.140	835	754	592	794	0.004687	0.004483	P23	3	2592	1.05	0.019	yiaL	b3576	putative lipase	Putative enzymes	putative enzyme; Not classified
366	489	-1.00	0.000	66	511	427	289	0.001704	0.003239	L23	2	4030	-1.08	-0.033	yiaM	b3577	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
256	126	1.00	0.000	-477	39	191	-219	-0.001293	0.001448	C16	2	538	-1.00	0.000	yiaN	b3578	putative membrane protein	putative membrane protein	putative membrane; Not classified
2205	2174	1.01	0.006	3414	3817	2190	3616	0.021337	0.016592	J17	3	1029	1.29	0.109	yiaO	b3579	putative solute-binding transport protein	Putative transport proteins	putative transport; Not classified
687	755	-1.10	-0.041	2118	2429	721	2274	0.013416	0.005463	K1	2	102	2.46	0.390	lyxK	b3580	"L-xylulose kinase, cryptic"	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
4496	5115	-1.14	-0.056	6212	6379	4806	6296	0.037149	0.036416	N23	2	4031	1.02	0.009	sgbH	b3581	probable 3-hexulose 6-phosphate synthase	Putative enzymes	"putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
2200	2453	-1.12	-0.047	1894	3113	2327	2503	0.014770	0.017631	P23	2	4032	-1.19	-0.077	sgbU	b3582	probable 3-hexulose-6-phosphate isomerase	Putative enzymes	"putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
267	282	-1.00	0.000	665	611	275	638	0.003764	0.002080	H4	4	1452	1.25	0.099	sgbE	b3583	putative epimerase/aldolase	Putative enzymes	putative enzyme; Not classified
4143	4066	1.02	0.008	8410	8273	4105	8341	0.049220	0.031104	E16	2	539	1.58	0.199	yiaT	b3584	putative outer membrane protein	putative membrane protein	putative membrane; Not classified
2367	2216	1.07	0.029	3647	3678	2292	3662	0.021610	0.017365	C23	3	282	1.24	0.095	yiaU	b3585	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
629	563	1.12	0.049	626	301	596	463	0.002735	0.004516	L17	3	1030	-1.51	-0.178	yiaV	b3586	putative membrane protein	putative membrane protein	putative membrane; Not classified
1942	2174	-1.12	-0.049	2565	2339	2058	2452	0.014468	0.015594	B1	3	4033	-1.08	-0.033	yiaW	b3587	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
314	341	-1.00	0.000	404	359	327	382	0.002252	0.002481	M1	2	103	-1.00	0.000	aldB	b3588	aldehyde dehydrogenase B (lactaldehyde dehydrogenase)	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
5759	5403	1.07	0.028	6361	8944	5581	7652	0.045155	0.042293	B1	4	2593	1.07	0.028	yiaY	b3589	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
5841	4834	1.21	0.082	5951	6430	5337	6190	0.036528	0.040444	I21	3	1813	-1.11	-0.044	selB	b3590	selenocysteinyl-tRNA-specific translation factor	"Translation, post-translational modification"	factor; Proteins - translation and modification
2826	4206	-1.49	-0.173	10240	9238	3516	9739	0.057465	0.026644	K21	3	1814	2.16	0.334	selA	b3591	selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
1666	1757	-1.05	-0.023	2253	1986	1712	2119	0.012506	0.012971	D1	4	2594	-1.04	-0.016	yibF	b3592	putative S-transferase	Putative enzymes	putative enzyme; Not classified
81	10	1.00	0.000	-29	-58	46	-44	-0.000258	0.000345	D1	3	4034	-1.00	0.000	rhsA	b3593	rhsA protein in rhs element	"Hypothetical, unclassified, unknown"	orf; Transposon-related functions
2511	2553	-1.02	-0.007	3522	2857	2532	3190	0.018822	0.019186	F1	3	4035	-1.02	-0.008	yibA	b3594	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
535	391	1.07	0.030	692	739	463	716	0.004222	0.003509	H1	3	4036	1.20	0.080	yibJ	b3595	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1967	1538	1.28	0.107	2823	2737	1753	2780	0.016404	0.013281	J1	3	4037	1.24	0.092	yibG	b3596	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
221	172	1.00	0.000	331	288	196	310	0.001829	0.001488	K12	3	622	1.00	0.000	yibH	b3597	putative membrane protein	putative membrane protein	putative membrane; Not classified
514	549	-1.07	-0.028	1059	802	532	930	0.005489	0.004030	L1	3	4038	1.36	0.134	yibI	b3598	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1847	1567	1.18	0.071	3155	3772	1707	3463	0.020436	0.012938	H21	1	852	1.58	0.199	mtlA	b3599	"PTS system, mannitol-specific enzyme IIABC components"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
382	406	-1.00	0.000	357	444	394	401	0.002364	0.002986	O1	2	104	-1.00	0.000	mtlD	b3600	mannitol-1-phosphate dehydrogenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
390	519	-1.04	-0.016	499	799	455	649	0.003832	0.003445	A3	2	105	1.11	0.046	mtlR	b3601	repressor for mtl	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
1916	2055	-1.07	-0.030	2930	3011	1986	2970	0.017527	0.015046	N1	3	4039	1.16	0.066	yibL	b3602	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
605	642	-1.06	-0.026	919	1021	623	970	0.005723	0.004722	J21	1	853	1.21	0.083	lldP	b3603	L-lactate permease	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
582	519	1.12	0.050	1802	1794	550	1798	0.010610	0.004170	J4	4	1453	2.54	0.406	lldR	b3604	transcriptional regulator	Regulatory function	"regulator; Energy metabolism, carbon: Aerobic respiration"
14755	14164	1.04	0.018	29650	26632	14460	28141	0.166052	0.109572	L4	4	1454	1.52	0.181	lldD	b3605	L-lactate dehydrogenase	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
3258	3095	1.05	0.022	3985	4323	3176	4154	0.024509	0.024069	F12	2	4040	1.02	0.008	yibK	b3606	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
608	424	1.22	0.085	894	812	516	853	0.005035	0.003909	I6	1	1941	1.29	0.110	cysE	b3607	serine acetyltransferase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Cysteine
9451	8540	1.11	0.044	17232	16907	8995	17070	0.100723	0.068165	N4	4	1455	1.48	0.170	gpsA	b3608	glycerol-3-phosphate dehydrogenase (NAD+)	Energy metabolism	"enzyme; Energy metabolism, carbon: Aerobic respiration"
1384	1422	-1.03	-0.012	2638	1931	1403	2284	0.013479	0.010632	L21	1	854	1.27	0.103	secB	b3609	protein export; molecular chaperone; may bind to signel sequence	Transport and binding proteins	"transport; Protein, peptide secretion"
1686	1400	1.20	0.081	1824	1430	1543	1627	0.009599	0.011692	L13	1	2358	-1.22	-0.086	grxC	b3610	glutaredoxin 3	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione"
1935	1978	-1.02	-0.010	2426	2210	1956	2318	0.013679	0.014824	B3	3	4041	-1.08	-0.035	yibN	b3611	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3144	2982	1.05	0.023	4350	3799	3063	4074	0.024041	0.023210	D3	3	4042	1.04	0.015	yibO	b3612	"putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase"	Putative enzymes	putative enzyme; Not classified
1354	1297	1.04	0.019	1755	1583	1326	1669	0.009849	0.010045	G16	2	540	-1.02	-0.009	yibP	b3613	putative membrane protein	putative membrane protein	putative membrane; Not classified
2102	2373	-1.13	-0.053	4117	2907	2237	3512	0.020723	0.016955	F3	3	4043	1.22	0.087	yibQ	b3614	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
324	310	1.00	0.000	392	634	317	513	0.003027	0.002402	I16	2	541	1.01	0.004	yibD	b3615	putative regulator	Putative regulatory proteins	putative regulator; Not classified
1488	1267	1.17	0.070	1699	1491	1377	1595	0.009411	0.010437	K6	1	1942	-1.11	-0.045	tdh	b3616	threonine dehydrogenase	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
4831	4680	1.03	0.014	4206	4020	4756	4113	0.024269	0.036037	A10	4	2241	-1.48	-0.172	kbl	b3617	2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
635	559	1.14	0.056	995	757	597	876	0.005168	0.004524	H3	3	4044	1.14	0.058	htrL	b3618	involved in lipopolysaccharide biosynthesis	"Hypothetical, unclassified, unknown"	phenotype; Not classified
3212	2109	1.52	0.183	4491	5065	2660	4778	0.028193	0.020160	K16	2	542	1.40	0.146	rfaD	b3619	ADP-L-glycero-D-mannoheptose-6-epimerase	Cell structure	enzyme; Surface polysaccharides & antigens
403	664	-1.33	-0.123	594	1019	533	807	0.004759	0.004042	M16	2	543	1.18	0.071	rfaF	b3620	ADP-heptose--lps heptosyltransferase II; lipopolysaccharide core biosynthesis	Cell structure	putative enzyme; Macromolecule metabolism: Lipopolysaccharide
229	535	-1.07	-0.030	327	584	382	455	0.002687	0.002895	O16	2	544	-1.00	0.000	rfaC	b3621	heptosyl transferase I; lipopolysaccharide core biosynthesis	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
12	159	-1.00	0.000	105	120	85	112	0.000662	0.000648	A18	2	545	1.00	0.000	rfaL	b3622	O-antigen ligase; lipopolysaccharide core biosynthesis	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
368	660	-1.32	-0.121	481	858	514	669	0.003949	0.003896	C18	2	546	1.01	0.006	rfaK	b3623	probably hexose transferase; lipopolysaccharide core biosynthesis	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
1936	2580	-1.33	-0.125	2512	2733	2258	2622	0.015474	0.017113	E18	2	547	-1.11	-0.044	rfaZ	b3624	lipopolysaccharide core biosynthesis	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
5858	7009	-1.20	-0.078	9997	13037	6433	11517	0.067959	0.048748	G18	2	548	1.39	0.144	rfaY	b3625	lipopolysaccharide core biosynthesis	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
501	527	-1.05	-0.022	200	441	514	321	0.001892	0.003894	I18	2	549	-1.30	-0.113	rfaJ	b3626	UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase	Cell structure	enzyme; Surface polysaccharides & antigens
201	379	-1.00	0.000	366	287	290	326	0.001924	0.002200	K18	2	550	-1.00	0.000	rfaI	b3627	"UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase"	Cell structure	enzyme; Surface polysaccharides & antigens
651	675	-1.04	-0.016	732	795	663	764	0.004507	0.005025	M18	2	551	-1.11	-0.047	rfaB	b3628	"UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase"	Cell structure	enzyme; Surface polysaccharides & antigens
60	157	-1.00	0.000	-66	54	108	-6	-0.000034	0.000822	O18	2	552	-1.00	0.000	rfaS	b3629	lipopolysaccharide core biosynthesis	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
325	537	-1.07	-0.031	808	1010	431	909	0.005365	0.003266	A20	2	553	1.64	0.216	rfaP	b3630	lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS co	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
170	282	-1.00	0.000	396	289	226	342	0.002020	0.001712	C20	2	554	1.00	0.000	rfaG	b3631	glucosyltransferase I; lipopolysaccharide core biosynthesis	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
1353	1598	-1.18	-0.072	1192	1280	1476	1236	0.007296	0.011182	E20	2	555	-1.53	-0.185	rfaQ	b3632	lipopolysaccharide core biosynthesis	Cell structure	enzyme; Macromolecule metabolism: Lipopolysaccharide
787	758	1.04	0.016	1156	993	772	1074	0.006340	0.005851	G20	2	556	1.08	0.035	kdtA	b3633	3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)	Cell structure	enzyme; Surface polysaccharides & antigens
143	361	-1.00	0.000	359	505	252	432	0.002548	0.001911	I20	2	557	1.00	0.000	kdtB	b3634	putative enzyme of lipopolysaccharide synthesis	Putative enzymes	putative enzyme; Not classified
270	361	-1.00	0.000	523	424	315	473	0.002793	0.002388	G11	1	1580	1.00	0.000	mutM	b3635	formamidopyrimidine DNA glycosylase	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
4541	4141	1.10	0.040	12132	12143	4341	12137	0.071618	0.032896	M21	3	1815	2.18	0.338	rpmG	b3636	50S ribosomal subunit protein L33	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
3503	2752	1.27	0.105	4446	3504	3127	3975	0.023455	0.023699	O21	3	1816	-1.01	-0.004	rpmB	b3637	50S ribosomal subunit protein L28	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
553	510	1.08	0.035	1426	1463	532	1444	0.008524	0.004029	D20	1	1226	2.12	0.325	radC	b3638	DNA repair protein	"DNA replication, repair, restriction/modification"	phenotype; Not classified
629	725	-1.15	-0.062	653	650	677	651	0.003843	0.005131	I11	1	1581	-1.34	-0.126	dfp	b3639	flavoprotein affecting synthesis of DNA and pantothenate metabolism	"DNA replication, repair, restriction/modification"	"phenotype; DNA - replication, repair, restriction/modification"
655	553	1.18	0.073	365	577	604	471	0.002778	0.004577	O2	2	2024	-1.53	-0.183	dut	b3640	deoxyuridinetriphosphatase	Nucleotide biosynthesis and metabolism	enzyme; 2'-Deoxyribonucleotide metabolism
1049	549	1.91	0.282	1295	1177	799	1236	0.007294	0.006054	J3	3	4045	1.20	0.081	ttk	b3641	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
152	211	-1.00	0.000	230	617	181	424	0.002500	0.001374	A4	2	2025	1.00	0.000	pyrE	b3642	orotate phosphoribosyltransferase	Nucleotide biosynthesis and metabolism	enzyme; Pyrimidine ribonucleotide biosynthesis
1079	1044	1.03	0.015	1128	1070	1062	1099	0.006486	0.008044	K11	1	1582	-1.24	-0.094	rph	b3643	RNase PH	"Transcription, RNA processing and degradation"	enzyme; Degradation of RNA
731	672	1.09	0.036	1312	1298	701	1305	0.007703	0.005316	M12	3	623	1.45	0.161	yicC	b3644	putative alpha helix protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
178	114	1.00	0.000	266	113	146	189	0.001117	0.001105	M11	1	1583	1.00	0.000	dinD	b3645	DNA-damage-inducible protein	"DNA replication, repair, restriction/modification"	"phenotype; DNA - replication, repair, restriction/modification"
1740	1151	1.51	0.179	3605	2649	1445	3127	0.018454	0.010954	L3	3	4046	1.68	0.227	yicG	b3646	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1265	1269	-1.00	-0.001	1423	1130	1267	1276	0.007530	0.009602	F1	4	2595	-1.28	-0.106	yicF	b3647	putative enzyme	Putative enzymes	putative enzyme; Not classified
436	568	-1.14	-0.056	257	993	502	625	0.003687	0.003806	C4	2	2026	-1.03	-0.014	gmk	b3648	guanylate kinase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
552	558	-1.01	-0.005	982	1417	555	1199	0.007076	0.004206	M5	2	1655	1.68	0.226	rpoZ	b3649	"RNA polymerase, omega subunit"	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
2262	2337	-1.03	-0.014	2066	2217	2299	2142	0.012637	0.017425	C17	2	162	-1.38	-0.140	spoT	b3650	"(p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase"	Regulatory function	enzyme; Global regulatory functions
3814	3502	1.09	0.037	3302	3690	3658	3496	0.020631	0.027719	O5	2	1656	-1.34	-0.128	spoU	b3651	putative RNA methylase	Putative enzymes	putative enzyme; Not classified
1845	2063	-1.12	-0.049	2376	2483	1954	2429	0.014335	0.014810	O11	1	1584	-1.03	-0.014	recG	b3652	"DNA helicase, resolution of Holliday junctions, branch migration"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1350	1222	1.10	0.043	1053	1017	1286	1035	0.006105	0.009745	N21	1	855	-1.60	-0.203	gltS	b3653	glutamate transport	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
5080	5027	1.01	0.005	3737	2921	5053	3329	0.019644	0.038293	N17	3	1031	-1.95	-0.290	yicE	b3654	putative transport protein	Putative transport proteins	putative transport; Not classified
2827	3361	-1.19	-0.075	7358	6693	3094	7026	0.041457	0.023446	N3	3	4047	1.77	0.248	yicH	b3655	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1627	1511	1.08	0.032	5161	4209	1569	4685	0.027647	0.011890	P3	3	4048	2.33	0.366	yicI	b3656	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2336	2359	-1.01	-0.004	3252	3385	2347	3318	0.019580	0.017787	P17	3	1032	1.10	0.042	yicJ	b3657	putative permease	Putative transport proteins	putative transport; Not classified
1481	1360	1.09	0.037	1941	1897	1420	1919	0.011323	0.010764	B5	3	4049	1.05	0.022	yicK	b3659	two-module transport protein	Putative transport proteins	putative transport; Not classified
2397	1700	1.41	0.149	3714	3651	2048	3682	0.021729	0.015520	B19	3	1033	1.40	0.146	yicL	b3660	putative permease transporter	Putative transport proteins	putative transport; Not classified
6264	6367	-1.02	-0.007	11087	10657	6316	10872	0.064154	0.047859	G4	3	588	1.34	0.127	nlpA	b3661	lipoprotein-28	Cell structure	"membrane; Macromolecule synthesis, modification: Lipoprotein"
2388	2407	-1.01	-0.003	4035	3712	2398	3874	0.022858	0.018169	E23	3	283	1.26	0.100	yicM	b3662	putative transport protein	Putative transport proteins	putative transport; Not classified
840	790	1.06	0.027	1310	830	815	1070	0.006315	0.006177	D5	3	4050	1.02	0.010	yicN	b3663	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1509	1004	1.50	0.177	3234	2876	1257	3055	0.018027	0.009522	F5	3	4051	1.89	0.277	yicO	b3664	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3220	1929	1.67	0.223	6830	4405	2574	5618	0.033150	0.019507	H5	3	4052	1.70	0.230	yicP	b3665	probable adenine deaminase (synthesis xanthine)	Putative enzymes	putative enzyme; Purine ribonucleotide biosynthesis
797	961	-1.21	-0.081	1039	716	879	877	0.005176	0.006663	P21	1	856	-1.29	-0.110	uhpT	b3666	hexose phosphate transport protein	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
8902	8101	1.10	0.041	12642	9673	8501	11158	0.065838	0.064422	B23	1	857	1.02	0.009	uhpC	b3667	regulator of uhpT	Regulatory function	"regulator; Transport of small molecules: Carbohydrates, organic acids, alcohols"
215	385	-1.00	0.000	1359	1447	300	1403	0.008281	0.002273	D23	1	858	2.76	0.441	uhpB	b3668	sensor histidine protein kinase phosphorylates UhpA	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2001	1666	1.20	0.079	2771	2810	1834	2791	0.016467	0.013895	F23	1	859	1.19	0.074	uhpA	b3669	"response regulator, positive activator of uhpT transcription (sensor, uhpB)"	Regulatory function	"regulator; Transport of small molecules: Carbohydrates, organic acids, alcohols"
214	30	1.00	0.000	371	320	122	345	0.002039	0.000927	M6	1	1943	1.00	0.000	ilvN	b3670	"acetolactate synthase I, valine sensitive, small subunit"	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
3988	4286	-1.07	-0.031	2521	1971	4137	2246	0.013253	0.031350	O6	1	1944	-2.37	-0.374	ilvB	b3671	"acetolactate synthase I,valine-sensitive, large subunit"	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
423	602	-1.20	-0.080	543	345	513	444	0.002620	0.003884	J5	3	4053	-1.29	-0.112	ivbL	b3672	ilvB operon leader peptide	Amino acid biosynthesis	"leader; Amino acid biosynthesis: Isoleucine, Valine"
971	861	1.13	0.052	1443	1109	916	1276	0.007532	0.006941	F20	1	1227	1.09	0.035	emrD	b3673	2-module integral membrane pump; multidrug resistance	Cell processes	transport; Drug/analog sensitivity
740	546	1.36	0.132	1559	1138	643	1349	0.007957	0.004870	G23	3	284	1.63	0.213	yidF	b3674	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
395	255	1.00	0.000	543	479	325	511	0.003016	0.002459	L5	3	4054	1.01	0.002	yidG	b3675	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
744	606	1.23	0.089	2009	1939	675	1974	0.011649	0.005115	N5	3	4055	2.28	0.357	yidH	b3676	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2281	1603	1.42	0.153	3319	3332	1942	3325	0.019621	0.014716	P5	3	4056	1.33	0.125	yidI	b3677	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
467	472	-1.00	0.000	690	774	469	732	0.004320	0.003557	H1	4	2596	1.21	0.084	yidJ	b3678	putative sulfatase	Putative enzymes	putative enzyme; Not classified
2238	2101	1.07	0.027	2496	2325	2170	2411	0.014225	0.016441	D19	3	1034	-1.16	-0.063	yidK	b3679	putative cotransporter	Putative transport proteins	putative transport; Not classified
881	934	-1.06	-0.025	692	1273	908	983	0.005798	0.006878	I23	3	285	-1.19	-0.074	yidL	b3680	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
3473	2987	1.16	0.065	3386	2685	3230	3035	0.017911	0.024474	H23	1	860	-1.37	-0.136	glvG	b3681	probable 6-phospho-beta-glucosidase	Putative enzymes	"putative enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
784	585	1.34	0.127	1099	945	684	1022	0.006032	0.005184	J23	1	861	1.16	0.066	glvB	b3682	"PTS system, arbutin-like IIB component"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
15128	15388	-1.02	-0.007	29419	27174	15258	28296	0.166969	0.115623	L23	1	862	1.44	0.160	glvC	b3683	"PTS system, arbutin-like IIC component"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
629	453	1.26	0.100	381	268	541	325	0.001915	0.004102	K23	3	286	-1.37	-0.136	yidP	b3684	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
2531	1901	1.33	0.124	2691	1291	2216	1991	0.011749	0.016792	F19	3	1035	-1.43	-0.155	yidE	b3685	putative transport protein	Putative transport proteins	putative transport; Not classified
176	211	-1.00	0.000	250	128	194	189	0.001117	0.001469	H20	1	1228	-1.00	0.000	ibpB	b3686	heat shock protein	Cell processes	"factor; Adaptations, atypical conditions"
3776	3180	1.19	0.075	3290	3233	3478	3261	0.019244	0.026357	J20	1	1229	-1.37	-0.137	ibpA	b3687	heat shock protein	Cell processes	"factor; Adaptations, atypical conditions"
648	722	-1.11	-0.047	796	730	685	763	0.004501	0.005192	B7	3	4057	-1.15	-0.062	yidQ	b3688	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1479	1480	-1.00	0.000	1968	1391	1480	1680	0.009912	0.011213	D7	3	4058	-1.13	-0.054	yidR	b3689	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1770	1833	-1.04	-0.015	3145	2694	1801	2920	0.017229	0.013650	F7	3	4059	1.26	0.101	yidS	b3690	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
613	248	1.23	0.089	909	873	430	891	0.005260	0.003262	H19	3	1036	1.61	0.208	dgoT	b3691	D-galactonate transport	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2391	2020	1.18	0.073	2503	2091	2206	2297	0.013554	0.016715	M23	3	287	-1.23	-0.091	dgoA	b3692	2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1141	1017	1.12	0.050	1644	1417	1079	1531	0.009031	0.008176	H7	3	4060	1.10	0.043	dgoK	b3693	2-oxo-3-deoxygalactonate kinase	Carbon compound catabolism	putative enzyme; Degradation of small molecules: Carbon compounds
581	645	-1.11	-0.045	373	374	613	374	0.002205	0.004643	O23	3	288	-1.55	-0.190	b3694	b3694	putative FADA-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
738	658	1.12	0.050	920	736	698	828	0.004886	0.005291	J7	3	4061	-1.08	-0.035	yidW	b3695	regulator protein for dgo operon	Putative regulatory proteins	putative regulator; Not classified
4624	4862	-1.05	-0.022	4497	7225	4743	5861	0.034587	0.035939	J1	4	2597	-1.04	-0.017	yidX	b3696	putative replicase EC 2.7.-	Putative enzymes	putative enzyme; Not classified
1882	1769	1.06	0.027	3393	3070	1826	3231	0.019067	0.013833	L7	3	4062	1.38	0.139	yidA	b3697	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
326	384	-1.00	0.000	584	344	355	464	0.002738	0.002687	N7	3	4063	1.00	0.000	yidB	b3698	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7261	6168	1.18	0.071	8416	8388	6715	8402	0.049579	0.050881	A13	1	1585	-1.03	-0.011	gyrB	b3699	"DNA gyrase subunit B, type II topoisomerase, ATPase activity"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
310	431	-1.00	0.000	339	110	370	225	0.001325	0.002806	C13	1	1586	-1.00	0.000	recF	b3700	"ssDNA and dsDNA binding, ATP binding"	Regulatory function	"regulator; DNA - replication, repair, restriction/modification"
361089	328532	1.10	0.041	239661	290767	344811	265214	1.564950	2.612891	E13	1	1587	-1.67	-0.223	dnaN	b3701	"DNA polymerase III, beta-subunit"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1007	1170	-1.16	-0.065	1078	1239	1088	1158	0.006834	0.008248	G13	1	1588	-1.21	-0.082	dnaA	b3702	DNA biosynthesis; initiation of chromosome replication; can be transcription regulator	"DNA replication, repair, restriction/modification"	"putative regulator; DNA - replication, repair, restriction/modification"
11245	11748	-1.04	-0.019	6522	7479	11497	7000	0.041306	0.087120	A23	3	1817	-2.11	-0.324	rpmH	b3703	50S ribosomal subunit protein L34	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
3759	3611	1.04	0.017	5686	4767	3685	5227	0.030842	0.027923	I13	1	1589	1.10	0.043	rnpA	b3704	"RNase P, protein component; protein C5; processes tRNA, 4.5S RNA"	"Transcription, RNA processing and degradation"	enzyme; Degradation of RNA
7154	5410	1.32	0.121	12349	13344	6282	12847	0.075804	0.047601	P7	3	4064	1.59	0.202	yidC	b3705	60 KD inner-membrane protein	Cell structure	membrane; Inner membrane
564	520	1.08	0.035	605	525	542	565	0.003333	0.004106	L20	1	1230	-1.23	-0.091	thdF	b3706	GTP-binding protein in thiophene and furan oxidation	Putative enzymes	putative enzyme; Detoxification
167	108	1.00	0.000	75	40	137	57	0.000337	0.001040	A8	1	1945	-1.00	0.000	tnaL	b3707	tryptophanase leader peptide	Carbon compound catabolism	leader; Degradation of small molecules: Amino acids
416	421	-1.00	0.000	511	589	418	550	0.003243	0.003169	C8	1	1946	1.02	0.010	tnaA	b3708	tryptophanase	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
178	167	1.00	0.000	234	182	173	208	0.001228	0.001310	N23	1	863	-1.00	0.000	tnaB	b3709	low affinity tryptophan permease	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
490	437	1.00	0.000	801	864	463	833	0.004914	0.003510	H2	2	289	1.40	0.146	yidY	b3710	putative transport protein	Putative transport proteins	putative transport; Not classified
393	393	1.00	0.000	346	456	393	401	0.002367	0.002980	C1	4	290	-1.00	0.000	yidZ	b3711	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
9045	7450	1.21	0.084	5404	4875	8247	5140	0.030328	0.062495	B9	3	4065	-2.06	-0.314	yieE	b3712	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
948	772	1.23	0.089	1143	1030	860	1087	0.006413	0.006516	D9	3	4066	-1.02	-0.007	yieF	b3713	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1218	889	1.37	0.137	1146	1152	1053	1149	0.006783	0.007979	J19	3	1037	-1.18	-0.071	yieG	b3714	putative membrane / transport protein	Putative transport proteins	putative transport; Not classified
9709	9684	1.00	0.001	11245	11090	9696	11167	0.065896	0.073476	L1	4	2598	-1.12	-0.047	yieH	b3715	putative phosphatase	Putative enzymes	putative enzyme; Not classified
647	464	1.29	0.112	406	372	556	389	0.002294	0.004211	F9	3	4067	-1.40	-0.147	yieI	b3716	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2837	2812	1.01	0.004	2056	1811	2824	1934	0.011411	0.021403	H9	3	4068	-1.88	-0.273	yieJ	b3717	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1884	2236	-1.19	-0.075	5744	5864	2060	5804	0.034248	0.015611	N1	4	2599	2.19	0.341	yieK	b3718	putative isomerase	Putative enzymes	putative enzyme; Not classified
260	245	1.00	0.000	195	289	252	242	0.001428	0.001911	H8	2	2600	-1.00	0.000	yieL	b3719	putative xylanase	Putative enzymes	putative enzyme; Not classified
1866	1593	1.17	0.069	5411	4423	1729	4917	0.029016	0.013104	J9	3	4069	2.21	0.345	yieC	b3720	putative receptor protein	putative membrane protein	putative membrane; Not classified
36	40	-1.00	0.000	300	303	38	302	0.001781	0.000286	C3	2	106	1.00	0.000	bglB	b3721	phospho-beta-glucosidase B; cryptic	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
2501	2390	1.05	0.020	2978	3062	2445	3020	0.017818	0.018530	P23	1	864	-1.04	-0.017	bglF	b3722	"PTS system beta-glucosides, enzyme II, cryptic"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
507	555	-1.09	-0.039	826	862	531	844	0.004979	0.004025	E3	2	107	1.24	0.092	bglG	b3723	positive regulation of bgl operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
33395	33924	-1.02	-0.007	47507	41250	33660	44378	0.261863	0.255064	E17	2	163	1.03	0.011	phoU	b3724	negative regulator for pho regulon and putative enzyme in phosphate metabolism	Regulatory function	regulator; Global regulatory functions
1722	1669	1.03	0.014	2187	1764	1696	1975	0.011657	0.012848	B1	2	865	-1.10	-0.042	pstB	b3725	ATP-binding component of high-affinity phosphate-specific transport system	Transport and binding proteins	transport; Transport of small molecules: Anions
84	257	-1.00	0.000	458	430	170	444	0.002618	0.001291	D1	2	866	1.00	0.000	pstA	b3726	high-affinity phosphate-specific transport system	Transport and binding proteins	transport; Transport of small molecules: Anions
1930	2041	-1.06	-0.024	2591	2931	1986	2761	0.016291	0.015047	F1	2	867	1.08	0.035	pstC	b3727	"high-affinity phosphate-specific transport system, cytoplasmic membrane component"	Transport and binding proteins	transport; Transport of small molecules: Anions
879	939	-1.07	-0.029	797	1017	909	907	0.005354	0.006888	H1	2	868	-1.29	-0.109	pstS	b3728	high-affinity phosphate-specific transport system; periplasmic phosphate-binding protein	Transport and binding proteins	transport; Transport of small molecules: Anions
2148	2146	1.00	0.000	1829	2046	2147	1937	0.011432	0.016269	C10	4	2242	-1.42	-0.153	glmS	b3729	L-glutamine:D-fructose-6-phosphate aminotransferase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Amino sugars
3887	4504	-1.16	-0.064	7830	8432	4195	8131	0.047977	0.031792	E10	4	2243	1.51	0.179	glmU	b3730	N-acetyl glucosamine-1-phosphate uridyltransferase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
999	1121	-1.12	-0.050	2998	3100	1060	3049	0.017992	0.008033	P4	4	1456	2.24	0.350	atpC	b3731	"membrane-bound ATP synthase, F1 sector, epsilon-subunit"	Energy metabolism	enzyme; ATP-proton motive force interconversion
6083	5298	1.15	0.060	10831	10140	5691	10486	0.061873	0.043122	B6	4	1457	1.43	0.157	atpD	b3732	"membrane-bound ATP synthase, F1 sector, beta-subunit"	Energy metabolism	enzyme; ATP-proton motive force interconversion
31848	29923	1.06	0.027	110850	99651	30886	105251	0.621053	0.234044	D6	4	1458	2.65	0.424	atpG	b3733	"membrane-bound ATP synthase, F1 sector, gamma-subunit"	Energy metabolism	enzyme; ATP-proton motive force interconversion
4880	5108	-1.05	-0.020	7813	6950	4994	7382	0.043556	0.037842	F6	4	1459	1.15	0.061	atpA	b3734	"membrane-bound ATP synthase, F1 sector, alpha-subunit"	Energy metabolism	enzyme; ATP-proton motive force interconversion
3087	2896	1.07	0.028	2348	2103	2991	2226	0.013133	0.022668	H6	4	1460	-1.73	-0.237	atpH	b3735	"membrane-bound ATP synthase, F1 sector, delta-subunit"	Energy metabolism	enzyme; ATP-proton motive force interconversion
4873	4558	1.07	0.029	7674	7827	4715	7751	0.045735	0.035732	J6	4	1461	1.28	0.107	atpF	b3736	"membrane-bound ATP synthase, F0 sector, subunit b"	Energy metabolism	enzyme; ATP-proton motive force interconversion
4809	4726	1.02	0.008	2916	3270	4767	3093	0.018250	0.036123	L6	4	1462	-1.98	-0.297	atpE	b3737	"membrane-bound ATP synthase, F0 sector, subunit c"	Energy metabolism	enzyme; ATP-proton motive force interconversion
5297	4918	1.08	0.032	3109	3658	5107	3383	0.019964	0.038703	N6	4	1463	-1.94	-0.288	atpB	b3738	"membrane-bound ATP synthase, F0 sector, subunit a"	Energy metabolism	enzyme; ATP-proton motive force interconversion
2058	1787	1.15	0.061	2776	2875	1923	2826	0.016673	0.014569	P6	4	1464	1.14	0.059	atpI	b3739	"membrane-bound ATP synthase, dispensable protein, affects expression of atpB"	Energy metabolism	enzyme; ATP-proton motive force interconversion
705	818	-1.16	-0.064	526	617	762	572	0.003374	0.005771	K13	1	1590	-1.71	-0.233	gidB	b3740	glucose-inhibited division; chromosome replication?	"Hypothetical, unclassified, unknown"	"phenotype; DNA - replication, repair, restriction/modification"
911	903	1.01	0.004	981	942	907	962	0.005674	0.006869	M13	1	1591	-1.21	-0.083	gidA	b3741	glucose-inhibited division; chromosome replication?	"Hypothetical, unclassified, unknown"	"phenotype; DNA - replication, repair, restriction/modification"
815	929	-1.14	-0.057	1070	828	872	949	0.005600	0.006609	O13	1	1592	-1.18	-0.072	mioC	b3742	initiation of chromosome replication	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
206	136	1.00	0.000	195	114	171	154	0.000911	0.001293	E8	1	1947	-1.00	0.000	asnC	b3743	"regulator for asnA, asnC and gidA"	Regulatory function	regulator; Amino acid biosynthesis: Asparagine
381	307	1.00	0.000	435	586	344	510	0.003012	0.002609	G8	1	1948	1.00	0.002	asnA	b3744	asparagine synthetase A	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Asparagine
3412	3360	1.02	0.007	9948	10406	3386	10177	0.060053	0.025659	L9	3	4070	2.34	0.369	yieM	b3745	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6382	6642	-1.04	-0.017	13747	16355	6512	15051	0.088813	0.049349	N9	3	4071	1.80	0.255	yieN	b3746	putative 2-component regulator	Putative regulatory proteins	putative regulator; Not classified
539	636	-1.18	-0.072	491	642	588	566	0.003341	0.004452	J1	2	869	-1.33	-0.125	kup	b3747	low affinity potassium transport system	Transport and binding proteins	transport; Transport of small molecules: Cations
3266	3734	-1.14	-0.058	2179	4538	3500	3358	0.019817	0.026521	L1	2	870	-1.34	-0.127	rbsD	b3748	D-ribose high-affinity transport system; membrane-associated protein	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
790	1067	-1.35	-0.130	487	1122	928	804	0.004747	0.007036	N1	2	871	-1.48	-0.171	rbsA	b3749	ATP-binding component of D-ribose high-affinity transport system	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1854	2039	-1.10	-0.041	2598	2530	1946	2564	0.015131	0.014749	D4	2	872	1.03	0.011	rbsC	b3750	D-ribose high-affinity transport system	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1399	1382	1.01	0.005	1422	1419	1391	1421	0.008383	0.010539	B3	2	873	-1.26	-0.099	rbsB	b3751	D-ribose periplasmic binding protein	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
249	352	-1.00	0.000	530	625	300	578	0.003409	0.002275	G3	2	108	1.14	0.055	rbsK	b3752	ribokinase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
1002	1078	-1.08	-0.032	922	1105	1040	1014	0.005981	0.007878	I3	2	109	-1.32	-0.120	rbsR	b3753	regulator for rbs operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
2473	2280	1.08	0.035	2105	1934	2376	2019	0.011916	0.018008	L19	3	1038	-1.51	-0.179	yieO	b3754	putative transport protein	Putative transport proteins	putative transport; Not classified
582	510	1.14	0.057	1084	971	546	1028	0.006063	0.004136	P9	3	4072	1.47	0.166	yieP	b3755	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
477	436	1.00	0.000	510	480	456	495	0.002922	0.003456	B11	3	4073	-1.15	-0.061	yifA	b3762	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1308	883	1.48	0.170	2887	2103	1096	2495	0.014721	0.008302	K16	2	2078	1.77	0.249	pssR	b3763	regulator of pssA	Regulatory function	"regulator; Macromolecule synthesis, modification: Phospholipids"
2487	2407	1.03	0.014	2421	1967	2447	2194	0.012947	0.018542	D11	3	4074	-1.43	-0.156	yifE	b3764	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
681	206	1.36	0.134	184	-25	443	80	0.000469	0.003360	C23	3	1818	-1.12	-0.049	yifB	b3765	putative 2-component regulator	Putative regulatory proteins	putative regulator; Not classified
1020	1023	-1.00	-0.002	8379	8506	1022	8443	0.049817	0.007741	I8	1	1949	6.44	0.809	ilvL	b3766	ilvGEDA operon leader peptide	Amino acid biosynthesis	"leader; Amino acid biosynthesis: Isoleucine, Valine"
1580	1369	1.15	0.062	2375	2196	1475	2286	0.013487	0.011174	K8	1	1950	1.21	0.082	ilvG_1	b3767	"acetolactate synthase II, large subunit, cryptic, interrupted"	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
554	507	1.09	0.039	505	438	531	472	0.002784	0.004021	M8	1	1951	-1.34	-0.127	ilvG_2	b3768	"acetolactate synthase II, valine insensitive, large subunit, silent in K-12"	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
2608	2941	-1.13	-0.052	3722	3503	2774	3612	0.021315	0.021024	O8	1	1952	1.01	0.006	ilvM	b3769	"acetolactate synthase II, valine insensitive, small subunit"	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
2869	2680	1.07	0.029	2425	1479	2774	1952	0.011518	0.021024	A10	1	1953	-1.83	-0.261	ilvE	b3770	branched-chain amino-acid aminotransferase	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
1934	1634	1.18	0.073	2375	1836	1784	2105	0.012423	0.013518	C10	1	1954	-1.09	-0.037	ilvD	b3771	dihydroxyacid dehydratase	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
633	372	1.27	0.102	823	723	502	773	0.004560	0.003807	E10	1	1955	1.20	0.078	ilvA	b3772	threonine deaminase (dehydratase)	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
2839	1869	1.52	0.181	1797	1751	2354	1774	0.010468	0.017839	G10	1	1956	-1.70	-0.232	ilvY	b3773	positive regulator for ilvC	Regulatory function	"regulator; Amino acid biosynthesis: Isoleucine, Valine"
8263	7626	1.08	0.035	15913	16792	7945	16353	0.096493	0.060202	I10	1	1957	1.60	0.205	ilvC	b3774	ketol-acid reductoisomerase	Amino acid biosynthesis	"enzyme; Amino acid biosynthesis: Isoleucine, Valine"
6577	6308	1.04	0.018	6650	6247	6443	6449	0.038051	0.048822	E23	3	1819	-1.28	-0.108	ppiC	b3775	peptidyl-prolyl cis-trans isomerase C (rotamase C)	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
574	506	1.13	0.055	582	595	540	588	0.003470	0.004089	F11	3	4075	-1.18	-0.071	b3776	b3776	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4989	4512	1.11	0.044	2621	2500	4751	2561	0.015110	0.035999	H11	3	4076	-2.38	-0.377	yifN	b3777	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
17936	16752	1.07	0.030	20595	21133	17344	20864	0.123113	0.131428	A15	1	1593	-1.07	-0.028	rep	b3778	"rep helicase, a single-stranded DNA dependent ATPase"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1781	2156	-1.21	-0.083	1677	1922	1969	1799	0.010618	0.014917	G17	2	164	-1.40	-0.148	gppA	b3779	guanosine pentaphosphatase; exopolyphosphatase	Regulatory function	enzyme; Global regulatory functions
5147	5629	-1.09	-0.039	5687	5930	5388	5808	0.034274	0.040832	A7	2	1657	-1.19	-0.076	rhlB	b3780	putative ATP-dependent RNA helicase	Putative enzymes	putative enzyme; Not classified
1831	1568	1.17	0.067	2317	2100	1699	2209	0.013032	0.012878	N13	1	2359	1.01	0.005	trxA	b3781	thioredoxin 1	Nucleotide biosynthesis and metabolism	"enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione"
1438	1328	1.08	0.035	2966	3817	1383	3392	0.020013	0.010479	C7	2	1658	1.91	0.281	rhoL	b3782	rho operon leader peptide	"Transcription, RNA processing and degradation"	"leader; RNA synthesis, modification, DNA transcription"
3962	4301	-1.09	-0.036	3553	5181	4131	4367	0.025770	0.031306	E7	2	1659	-1.21	-0.085	rho	b3783	transcription termination factor Rho; polarity suppressor	"Transcription, RNA processing and degradation"	"factor; RNA synthesis, modification, DNA transcription"
613	660	-1.08	-0.032	761	692	636	726	0.004287	0.004822	K20	2	558	-1.12	-0.051	rfe	b3784	UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase; synthesis of enterobacterial common antigen (ECA)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
3838	3767	1.02	0.008	2114	1953	3802	2033	0.011999	0.028812	M20	2	559	-2.40	-0.380	wzzE	b3785	putative transport protein	Putative transport proteins	putative transport; Not classified
4552	4915	-1.08	-0.033	5065	5161	4733	5113	0.030170	0.035868	G10	4	2244	-1.19	-0.075	wecB	b3786	UDP-N-acetyl glucosamine -2-epimerase; synthesis of enterobacterial common antigen (ECA)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
3195	4514	-1.41	-0.150	4073	2913	3855	3493	0.020611	0.029211	I10	4	2245	-1.42	-0.151	wecC	b3787	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; synthesis of enterobacterial common antigen (ECA)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
1302	1609	-1.24	-0.092	2142	2416	1456	2279	0.013449	0.011030	K10	4	2246	1.22	0.086	rffG	b3788	"dTDP-glucose 4,6-dehydratase"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
2140	2140	-1.00	0.000	2863	2362	2140	2612	0.015413	0.016218	M10	4	2247	-1.05	-0.022	rffH	b3789	glucose-1-phosphate thymidylyltransferase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
2050	1857	1.10	0.043	1073	895	1953	984	0.005807	0.014803	J11	3	4077	-2.55	-0.406	wecD	b3790	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
400	374	1.00	0.000	527	795	387	661	0.003901	0.002932	E1	4	291	1.30	0.114	wecE	b3791	putative regulator	Putative regulatory proteins	putative regulator; Not classified
3521	3220	1.09	0.039	5786	5979	3370	5882	0.034709	0.025539	B3	4	2601	1.36	0.133	wzxE	b3792	putative cytochrome	Putative enzymes	putative carrier; Not classified
4299	4878	-1.13	-0.055	5365	5808	4589	5586	0.032964	0.034773	O20	2	560	-1.05	-0.023	wecF	b3793	TDP-Fuc4NAc:lipidII transferase; synthesis of enterobacterial common antigen (ECA)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
2134	2059	1.04	0.016	6530	6031	2096	6281	0.037060	0.015885	A22	2	561	2.33	0.368	wecG	b3794	probable UDP-N-acetyl-D-mannosaminuronic acid transferase; synthesis of enterobacterial common antigen (ECA)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions"
5438	5063	1.07	0.031	5357	4879	5251	5118	0.030200	0.039788	N19	3	1039	-1.32	-0.120	yifK	b3795	putative amino acid/amine transport protein	Putative transport proteins	putative transport; Not classified
1136	1669	-1.47	-0.167	2413	2765	1402	2589	0.015274	0.010626	O10	4	2248	1.44	0.158	aslB	b3800	putative arylsulfatase regulator	Regulatory function	regulator; Not classified
419	498	-1.00	0.000	568	425	458	496	0.002929	0.003474	A12	4	2249	-1.16	-0.064	aslA	b3801	arylsulfatase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Sulfur metabolism
1472	1246	1.18	0.072	2254	2229	1359	2242	0.013228	0.010299	P13	1	2360	1.28	0.109	hemY	b3802	a late step of protoheme IX synthesis	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
5356	4881	1.10	0.040	5435	4956	5118	5195	0.030657	0.038785	B15	1	2361	-1.27	-0.102	hemX	b3803	uroporphyrinogen III methylase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
926	740	1.25	0.098	1520	1220	833	1370	0.008085	0.006312	D15	1	2362	1.28	0.107	hemD	b3804	uroporphyrinogen III synthase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
3801	3579	1.06	0.026	9425	8997	3690	9211	0.054354	0.027962	F15	1	2363	1.94	0.289	hemC	b3805	porphobilinogen deaminase = hydroxymethylbilane synthase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
3334	3292	1.01	0.006	3307	3621	3313	3464	0.020441	0.025104	I17	2	165	-1.23	-0.089	cyaA	b3806	adenylate cyclase	Regulatory function	enzyme; Global regulatory functions
395	327	1.00	0.000	647	277	361	462	0.002726	0.002737	L11	3	4078	-1.00	0.000	cyaY	b3807	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
416	315	1.00	0.000	825	559	366	692	0.004083	0.002771	N11	3	4079	1.36	0.134	b3808	b3808	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
667	718	-1.08	-0.032	1274	1053	693	1164	0.006867	0.005248	K10	1	1958	1.31	0.117	dapF	b3809	diaminopimelate epimerase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Lysine
1527	1747	-1.14	-0.058	3853	3740	1637	3796	0.022401	0.012405	P11	3	4080	1.81	0.257	yigA	b3810	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7522	8366	-1.11	-0.046	10858	10087	7944	10473	0.061795	0.060197	C15	1	1594	1.03	0.011	xerC	b3811	"site-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division"	Cell processes	enzyme; Cell division
1061	1139	-1.07	-0.031	1280	1590	1100	1435	0.008469	0.008336	D3	4	2602	1.02	0.007	yigB	b3812	putative phosphatase	Putative enzymes	putative enzyme; Not classified
3239	3054	1.06	0.025	2520	1860	3146	2190	0.012923	0.023842	E15	1	1595	-1.84	-0.266	uvrD	b3813	DNA-dependent ATPase I and helicase II	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1435	1269	1.13	0.053	1849	1810	1352	1829	0.010794	0.010243	B13	3	4081	1.05	0.023	b3814	b3814	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7866	6385	1.23	0.091	5968	6580	7125	6274	0.037022	0.053994	D13	3	4082	-1.46	-0.164	yigE	b3815	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1206	1437	-1.19	-0.076	1608	2112	1321	1860	0.010977	0.010011	D3	2	874	1.10	0.040	corA	b3816	"Mg2+ transport, system I"	Transport and binding proteins	transport; Transport of small molecules: Cations
181	147	1.00	0.000	318	242	164	280	0.001651	0.001245	F13	3	4083	1.00	0.000	yigF	b3817	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
337	453	-1.00	0.000	239	224	395	232	0.001367	0.002995	H13	3	4084	-1.00	0.000	yigG	b3818	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1691	1719	-1.02	-0.007	2318	2041	1705	2179	0.012860	0.012920	J13	3	4085	-1.00	-0.002	rarD	b3819	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2118	1780	1.19	0.076	1749	1458	1949	1604	0.009463	0.014769	L13	3	4086	-1.56	-0.193	yigI	b3820	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4941	5121	-1.04	-0.015	4630	4093	5031	4362	0.025736	0.038124	C12	4	2250	-1.48	-0.171	pldA	b3821	outer membrane phospholipase A	Fatty acid and phospholipid metabolism	enzyme; Central intermediary metabolism: Phosphorus compounds
3855	3363	1.15	0.059	4897	3907	3609	4402	0.025975	0.027345	G15	1	1596	-1.05	-0.022	recQ	b3822	ATP-dependent DNA helicase	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
482	459	1.00	0.000	668	777	471	722	0.004263	0.003566	N13	3	4087	1.20	0.077	yigJ	b3823	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1166	1109	1.05	0.022	1855	1466	1137	1660	0.009797	0.008617	P13	3	4088	1.14	0.056	yigK	b3824	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2097	2192	-1.05	-0.019	2107	2687	2144	2397	0.014143	0.016248	E12	4	2251	-1.15	-0.060	pldB	b3825	lysophospholipase L(2)	Fatty acid and phospholipid metabolism	enzyme; Central intermediary metabolism: Phosphorus compounds
1318	1448	-1.10	-0.041	1314	1160	1383	1237	0.007299	0.010478	B15	3	4089	-1.44	-0.157	yigL	b3826	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
751	806	-1.07	-0.031	1062	705	778	884	0.005215	0.005897	D15	3	4090	-1.13	-0.053	yigM	b3827	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1292	1183	1.09	0.038	2211	1948	1237	2079	0.012269	0.009377	M10	1	1959	1.31	0.117	metR	b3828	regulator for metE and metH	Regulatory function	regulator; Amino acid biosynthesis: Methionine
15639	11976	1.31	0.116	15105	16596	13807	15850	0.093528	0.104627	O10	1	1960	-1.12	-0.049	metE	b3829	tetrahydropteroyltriglutamate methyltransferase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Methionine
3430	2956	1.16	0.064	5885	5761	3193	5823	0.034360	0.024196	F3	4	2603	1.42	0.152	ysgA	b3830	putative enzyme	Putative enzymes	putative enzyme; Not classified
911	905	1.01	0.003	1331	2986	908	2158	0.012735	0.006877	E4	2	2027	1.85	0.268	udp	b3831	uridine phosphorylase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
196	40	1.00	0.000	403	153	118	278	0.001642	0.000893	O12	3	624	1.00	0.000	yigN	b3832	putative alpha helix chain	"Hypothetical, unclassified, unknown"	phenotype; Not classified
710	493	1.42	0.152	810	720	601	765	0.004514	0.004558	F15	3	4091	-1.01	-0.004	ubiE	b3833	"2-octaprenyl-6-methoxy-1,4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
3244	2773	1.17	0.068	7176	4811	3009	5994	0.035368	0.022799	H15	3	4092	1.55	0.191	yigP	b3834	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
613	516	1.19	0.075	919	962	564	941	0.005551	0.004276	J15	3	4093	1.30	0.113	yigR	b3835	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7213	6116	1.18	0.072	6139	5606	6664	5873	0.034654	0.050501	L15	3	4094	-1.46	-0.164	b3836	b3836	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
909	673	1.35	0.131	3330	2744	791	3037	0.017921	0.005994	N15	3	4095	2.99	0.476	b3837	b3837	putative histone	Putative factors	putative factor; Not classified
1213	1065	1.14	0.057	1586	1352	1139	1469	0.008669	0.008629	P15	3	4096	1.00	0.002	b3838	b3838	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2462	2007	1.23	0.089	1804	1253	2235	1529	0.009021	0.016934	B17	3	4097	-1.88	-0.273	yigU	b3839	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
941	756	1.24	0.095	933	791	848	862	0.005086	0.006429	D17	3	4098	-1.26	-0.102	yigW_1	b3840	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
510	497	1.02	0.009	640	480	504	560	0.003306	0.003817	F17	3	4099	-1.15	-0.062	yigW_2	b3841	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
803	1074	-1.34	-0.126	829	1443	938	1136	0.006702	0.007111	C22	2	562	-1.06	-0.026	rfaH	b3842	"transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin"	Regulatory function	regulator; Macromolecule metabolism: Lipopolysaccharide
2229	2016	1.11	0.044	2490	3110	2123	2800	0.016522	0.016085	H17	3	4100	1.03	0.012	yigC	b3843	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
1984	2278	-1.15	-0.060	5114	4946	2131	5030	0.029681	0.016145	B8	4	1465	1.84	0.264	ubiB	b3844	ferrisiderophore reductase; flavin reductase (NADPH:flavin oxidoreductase)	Energy metabolism	"enzyme; Energy metabolism, carbon: Electron transport"
1189	1280	-1.08	-0.032	2429	2715	1235	2572	0.015176	0.009356	M16	2	2079	1.62	0.210	fadA	b3845	thiolase I; 3-ketoacyl-CoA thiolase; acetyl-CoA transferase	Fatty acid and phospholipid metabolism	enzyme; Degradation of small molecules: Fatty acids
2843	3045	-1.07	-0.030	1997	2974	2944	2486	0.014668	0.022309	O16	2	2080	-1.52	-0.182	fadB	b3846	4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase	Fatty acid and phospholipid metabolism	enzyme; Degradation of small molecules: Fatty acids
14345	14320	1.00	0.001	18955	17144	14332	18050	0.106505	0.108607	G23	3	1820	-1.02	-0.008	pepQ	b3847	proline dipeptidase	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
1647	1488	1.11	0.044	2257	1650	1568	1953	0.011525	0.011879	H3	4	2604	-1.03	-0.013	yigZ	b3848	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
656	788	-1.20	-0.080	1204	1899	722	1551	0.009154	0.005473	F3	2	875	1.67	0.223	trkH	b3849	"potassium uptake, requires TrkE"	Transport and binding proteins	transport; Transport of small molecules: Cations
9366	8641	1.08	0.035	14810	12624	9004	13717	0.080940	0.068227	J17	3	4101	1.19	0.074	hemG	b3850	protoporphyrin oxidase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
1378	1407	-1.02	-0.009	2088	1923	1393	2005	0.011834	0.010553	L17	3	4102	1.12	0.050	mobB	b3856	molybdopterin-guanine dinucleotide biosynthesis protein B	Central intermediary metabolism	enzyme; Central intermediary metabolism: Nucleotide interconversions
1906	1760	1.08	0.035	3196	3499	1833	3348	0.019755	0.013889	H15	1	2364	1.42	0.153	mobA	b3857	"molybdopterin ---> molybdopterin-guanine dinucleotide, protein Ar"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Molybdopterin"
540	450	1.08	0.033	834	698	495	766	0.004520	0.003750	N17	3	4103	1.21	0.081	yihD	b3858	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5528	5500	1.01	0.002	9643	9396	5514	9520	0.056173	0.041781	P17	3	4104	1.34	0.129	yihE	b3859	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6555	5139	1.28	0.106	7107	4233	5847	5670	0.033457	0.044307	I23	3	1821	-1.32	-0.122	dsbA	b3860	"protein disulfide isomerase I, essential for cytochrome c synthesis and formate-dependent reduction"	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
5502	4842	1.14	0.055	6881	5651	5172	6266	0.036973	0.039194	B19	3	4105	-1.06	-0.025	yihF	b3861	putative GTP-binding protein	"Hypothetical, unclassified, unknown"	orf; Not classified
1357	1253	1.08	0.035	1849	2074	1305	1962	0.011576	0.009889	J3	4	2605	1.17	0.068	yihG	b3862	putative endonuclease	Putative enzymes	putative enzyme; Not classified
1910	2166	-1.13	-0.055	2840	3347	2038	3093	0.018253	0.015445	I15	1	1597	1.18	0.073	polA	b3863	"DNA polymerase I, 3' --> 5' polymerase, 5' --> 3' and 3' --> 5' exonuclease"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
3715	3406	1.09	0.038	7039	5790	3561	6414	0.037849	0.026982	D19	3	4106	1.40	0.147	yihA	b3865	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1870	1606	1.16	0.066	3265	2329	1738	2797	0.016503	0.013171	F19	3	4107	1.25	0.098	yihI	b3866	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1366	1286	1.06	0.026	998	1283	1326	1140	0.006729	0.010046	J15	1	2365	-1.49	-0.174	hemN	b3867	O2-independent coproporphyrinogen III oxidase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
1298	1506	-1.16	-0.064	1336	1279	1402	1307	0.007713	0.010622	A12	1	1961	-1.38	-0.139	glnG	b3868	"response regulator for gln (sensor glnL) (nitrogen regulator I, NRI)"	Regulatory function	regulator; Amino acid biosynthesis: Glutamine
524	526	-1.00	-0.001	798	803	525	801	0.004725	0.003978	C12	1	1962	1.19	0.075	glnL	b3869	"histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII)"	Regulatory function	enzyme; Amino acid biosynthesis: Glutamine
3645	4845	-1.33	-0.124	2896	3209	4245	3052	0.018010	0.032167	E12	1	1963	-1.79	-0.252	glnA	b3870	glutamine synthetase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Glutamine
3662	3258	1.12	0.051	4582	4297	3460	4439	0.026194	0.026219	K23	3	1822	-1.00	0.000	yihK	b3871	putative GTP-binding factor	Putative factors	putative factor; Not classified
153	103	1.00	0.000	211	174	128	193	0.001137	0.000969	H19	3	4108	1.00	0.000	yihL	b3872	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
659	669	-1.02	-0.007	1016	1102	664	1059	0.006248	0.005029	J19	3	4109	1.24	0.094	yihM	b3873	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7993	7530	1.06	0.026	12905	12239	7761	12572	0.074182	0.058812	P19	3	1040	1.26	0.101	yihN	b3874	putative resistance protein (transport)	Putative transport proteins	putative transport; Drug/analog sensitivity
860	773	1.11	0.046	2513	2171	817	2342	0.013817	0.006189	L19	3	4110	2.23	0.349	yshA	b3875	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2414	1937	1.25	0.096	4546	4391	2175	4469	0.026368	0.016483	B21	3	1041	1.60	0.204	yihO	b3876	putative permease	Putative transport proteins	putative transport; Not classified
1267	1270	-1.00	-0.001	2254	1906	1269	2080	0.012274	0.009615	D21	3	1042	1.28	0.106	yihP	b3877	putative permease	Putative transport proteins	putative transport; Not classified
1056	830	1.27	0.105	1451	1527	943	1489	0.008785	0.007146	L3	4	2606	1.23	0.090	yihQ	b3878	putative glycosidase	Putative enzymes	putative enzyme; Not classified
210	174	1.00	0.000	438	522	192	480	0.002830	0.001452	N3	4	2607	1.00	0.000	yihR	b3879	putative aldose-1-epimerase (EC 5.1.3.3)	Putative enzymes	putative enzyme; Not classified
890	515	1.73	0.238	943	468	702	705	0.004160	0.005322	N19	3	4111	-1.28	-0.107	yihS	b3880	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
766	944	-1.23	-0.091	1185	1243	855	1214	0.007164	0.006476	P3	4	2608	1.11	0.044	yihT	b3881	putative aldolase	Putative enzymes	putative enzyme; Not classified
789	744	1.06	0.025	1026	627	767	827	0.004878	0.005810	B5	4	2609	-1.19	-0.076	yihU	b3882	putative dehydrogenase	Putative enzymes	putative enzyme; Not classified
857	476	1.71	0.234	1051	976	666	1014	0.005982	0.005047	D5	4	2610	1.19	0.074	yihV	b3883	putative kinase	Putative enzymes	putative enzyme; Not classified
586	602	-1.03	-0.012	1149	885	594	1017	0.006001	0.004501	G1	4	292	1.33	0.125	yihW	b3884	putative DEOR-type transcriptional regulator	Putative regulatory proteins	putative enzyme; Not classified
3297	3351	-1.02	-0.007	3917	3856	3324	3887	0.022934	0.025189	F5	4	2611	-1.10	-0.041	yihX	b3885	putative phosphatase	Putative enzymes	putative enzyme; Not classified
17926	17091	1.05	0.021	23743	33941	17509	28842	0.170189	0.132676	P19	3	4112	1.28	0.108	rbn	b3886	tRNA processing exoribonuclease BN	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
856	788	1.09	0.036	1029	685	822	857	0.005059	0.006229	B21	3	4113	-1.23	-0.090	yihZ	b3887	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
29565	22346	1.32	0.122	13920	13608	25956	13764	0.081216	0.196686	H5	4	2612	-2.42	-0.384	yiiD	b3888	putative acetyltransferase (EC 2.3.1.18)	Putative enzymes	putative enzyme; Not classified
623	331	1.25	0.096	1348	1150	477	1249	0.007369	0.003618	D21	3	4114	2.04	0.309	yiiE	b3889	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
879	739	1.19	0.075	1020	738	809	879	0.005188	0.006131	F21	3	4115	-1.18	-0.073	yiiF	b3890	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
10942	10881	1.01	0.002	31582	30565	10911	31074	0.183356	0.082684	D8	4	1466	2.22	0.346	fdhE	b3891	affects formate dehydrogenase-N	Energy metabolism	"phenotype; Energy metabolism, carbon: Anaerobic respiration"
2598	3479	-1.34	-0.127	8239	8139	3039	8189	0.048322	0.023027	F8	4	1467	2.10	0.322	fdoI	b3892	"formate dehydrogenase, cytochrome B556 (FDO) subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
12979	9787	1.33	0.123	32593	31000	11383	31797	0.187623	0.086259	H8	4	1468	2.18	0.337	fdoH	b3893	"formate dehydrogenase-O, iron-sulfur subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
554	510	1.09	0.036	359	355	532	357	0.002106	0.004028	J8	4	1469	-1.34	-0.128	fdoG	b3894	"formate dehydrogenase-O, major subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
3702	3227	1.15	0.060	2034	1978	3465	2006	0.011835	0.026254	L8	4	1470	-2.22	-0.346	fdhD	b3895	affects formate dehydrogenase-N	Energy metabolism	"phenotype; Energy metabolism, carbon: Anaerobic respiration"
801	560	1.43	0.155	1493	724	680	1109	0.006541	0.005154	H21	3	4116	1.27	0.103	yiiG	b3896	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
164	50	1.00	0.000	195	577	107	386	0.002279	0.000810	H3	2	876	1.00	0.000	frvR	b3897	putative frv operon regulatory protein	Putative regulatory proteins	putative regulator; Not classified
1222	1128	1.08	0.035	1489	1195	1175	1342	0.007918	0.008903	J21	3	4117	-1.12	-0.051	frvX	b3898	frv operon protein	Putative transport proteins	"orf; Transport of small molecules: Carbohydrates, organic acids, alcohols"
22	336	-1.00	0.000	692	720	179	706	0.004167	0.001358	J3	2	877	1.39	0.143	frvB	b3899	"PTS system, fructose-like enzyme IIBC component"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
-111	166	-1.00	0.000	100	196	27	148	0.000875	0.000208	L3	2	878	1.00	0.000	frvA	b3900	"PTS system, fructose-specific IIA component"	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
162	-7	1.00	0.000	283	-198	77	43	0.000251	0.000586	L21	3	4118	-1.00	0.000	yiiL	b3901	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
75	228	-1.00	0.000	244	174	152	209	0.001234	0.001148	K3	2	110	1.00	0.000	rhaD	b3902	rhamnulose-phosphate aldolase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
310	490	-1.00	0.000	250	390	400	320	0.001889	0.003030	M3	2	111	-1.01	-0.004	rhaA	b3903	L-rhamnose isomerase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
65	75	-1.00	0.000	112	232	70	172	0.001013	0.000531	O3	2	112	1.00	0.000	rhaB	b3904	rhamnulokinase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
5332	4991	1.07	0.029	887	1667	5161	1277	0.007536	0.039111	A5	2	113	-5.19	-0.715	rhaS	b3905	positive regulator for rhaBAD operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
66	106	-1.00	0.000	15	293	86	154	0.000906	0.000651	C5	2	114	1.00	0.000	rhaR	b3906	positive regulator for rhaRS operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
559	530	1.05	0.023	913	875	544	894	0.005276	0.004126	N3	2	879	1.28	0.107	rhaT	b3907	rhamnose transport	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
6054	6728	-1.11	-0.046	6538	6287	6391	6412	0.037836	0.048428	N20	1	1231	-1.28	-0.107	sodA	b3908	"superoxide dismutase, manganese"	Cell processes	enzyme; Detoxification
142	415	-1.00	0.000	195	519	278	357	0.002106	0.002108	P3	2	880	-1.00	0.000	kdgT	b3909	2-keto-3-deoxy-D-gluconate transport system	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2992	3005	-1.00	-0.002	5016	4255	2998	4636	0.027353	0.022720	N21	3	4119	1.20	0.081	yiiM	b3910	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
227	337	-1.00	0.000	334	421	282	378	0.002228	0.002138	K17	2	166	1.00	0.000	cpxA	b3911	"probable sensor protein (histidine protein kinase), acting on arcA"	Putative regulatory proteins	putative regulator; Global regulatory functions
690	653	1.06	0.024	789	997	671	893	0.005269	0.005088	I1	4	293	1.04	0.015	cpxR	b3912	transcriptional regulator in 2-component system	Putative regulatory proteins	putative regulator; Not classified
5279	4473	1.18	0.072	7795	8989	4876	8392	0.049518	0.036948	P21	3	4120	1.34	0.127	b3913	b3913	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
866	698	1.24	0.094	1052	765	782	908	0.005359	0.005922	B23	3	4121	-1.11	-0.043	b3914	b3914	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4149	3547	1.17	0.068	5328	3794	3848	4561	0.026912	0.029157	D23	3	4122	-1.08	-0.035	yiiP	b3915	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1469	1257	1.17	0.068	2250	2584	1363	2417	0.014263	0.010330	N8	4	1471	1.38	0.140	pfkA	b3916	6-phosphofructokinase I	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
604	609	-1.01	-0.004	300	781	607	540	0.003189	0.004596	B5	2	881	-1.44	-0.159	sbp	b3917	periplasmic sulfate-binding protein	Transport and binding proteins	transport; Transport of small molecules: Anions
601	365	1.20	0.080	307	404	483	355	0.002097	0.003659	A18	2	2081	-1.22	-0.086	cdh	b3918	CDP-diacylglycerol phosphotidylhydrolase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
2824	2372	1.19	0.076	5612	6196	2598	5904	0.034837	0.019689	P8	4	1472	1.77	0.248	tpiA	b3919	triosephosphate isomerase	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
1539	1488	1.03	0.015	1285	1326	1513	1305	0.007702	0.011469	F23	3	4123	-1.49	-0.173	yiiQ	b3920	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
967	739	1.31	0.117	1046	1030	853	1038	0.006127	0.006461	H23	3	4124	-1.05	-0.023	yiiR	b3921	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
584	576	1.01	0.006	870	701	580	786	0.004637	0.004397	J23	3	4125	1.05	0.023	yiiS	b3922	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
733	555	1.32	0.121	1428	1584	644	1506	0.008887	0.004880	K1	4	294	1.82	0.260	yiiT	b3923	putative regulator	Putative regulatory proteins	putative regulator; Not classified
1611	1775	-1.10	-0.042	4866	4420	1693	4643	0.027395	0.012828	B10	4	1473	2.14	0.330	fpr	b3924	ferredoxin-NADP reductase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
2780	2259	1.23	0.090	3295	2860	2520	3078	0.018160	0.019094	L23	3	4126	-1.05	-0.022	glpX	b3925	unknown function in glycerol metabolism	"Hypothetical, unclassified, unknown"	phenotype; Not classified
6992	8898	-1.27	-0.105	12210	9461	7945	10835	0.063936	0.060203	G12	4	2252	1.06	0.026	glpK	b3926	glycerol kinase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
24	200	-1.00	0.000	244	376	112	310	0.001829	0.000848	D5	2	882	1.00	0.000	glpF	b3927	facilitated diffusion of glycerol	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
7306	6831	1.07	0.029	13872	11656	7068	12764	0.075314	0.053561	N23	3	4127	1.41	0.148	yiiU	b3928	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
948	699	1.36	0.132	1863	2327	823	2095	0.012361	0.006239	L15	1	2366	1.98	0.297	menG	b3929	"menaquinone biosynthesis, unknown"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"putative enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
826	891	-1.08	-0.033	1344	1113	859	1229	0.007249	0.006506	N15	1	2367	1.11	0.047	menA	b3930	"1,4-dihydroxy-2-naphthoate --> dimethylmenaquinone"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
1924	1891	1.02	0.007	2241	2042	1908	2142	0.012639	0.014455	P20	1	1232	-1.14	-0.058	hslU	b3931	"heat shock protein hslVU, ATPase subunit, homologous to chaperones"	Cell processes	"factor; Adaptations, atypical conditions"
1094	1166	-1.07	-0.027	1704	1424	1130	1564	0.009228	0.008564	M23	3	1823	1.08	0.032	hslV	b3932	"heat shock protein hslVU, proteasome-related peptidase subunit"	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
3160	3097	1.02	0.009	2496	2135	3129	2316	0.013664	0.023709	B22	1	1233	-1.74	-0.239	ftsN	b3933	essential cell division protein	Cell processes	phenotype; Cell division
-470	617	-1.23	-0.091	4003	1774	73	2888	0.017044	0.000556	M17	2	167	5.68	0.754	cytR	b3934	"regulator for deo operon, udp, cdd, tsx, nupC, and nupG"	Regulatory function	regulator; Global regulatory functions
-22	-88	1.00	0.000	23	74	-55	49	0.000287	-0.000416	K15	1	1598	1.00	0.000	priA	b3935	primosomal protein N'(= factor Y)(putative helicase)	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
3252	3207	1.01	0.006	3355	2915	3230	3135	0.018500	0.024473	O23	3	1824	-1.32	-0.122	rpmE	b3936	50S ribosomal subunit protein L31	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
3429	3514	-1.02	-0.011	6743	5793	3472	6268	0.036985	0.026307	P23	3	4128	1.41	0.148	yiiX	b3937	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1694	1676	1.01	0.005	3072	1994	1685	2533	0.014947	0.012771	G12	1	1964	1.17	0.068	metJ	b3938	repressor of all met genes but metF	Regulatory function	regulator; Amino acid biosynthesis: Methionine
16361	14483	1.13	0.053	15556	16835	15422	16196	0.095566	0.116863	I12	1	1965	-1.22	-0.087	metB	b3939	cystathionine gamma-synthase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Methionine
10269	10363	-1.01	-0.004	8558	7038	10316	7798	0.046013	0.078172	K12	1	1966	-1.70	-0.230	metL	b3940	aspartokinase II and homoserine dehydrogenase II	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Methionine
6763	7630	-1.13	-0.052	6389	7317	7197	6853	0.040439	0.054533	I12	4	2253	-1.35	-0.130	metF	b3941	"5,10-methylenetetrahydrofolate reductase"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
1459	1617	-1.11	-0.045	2813	2174	1538	2494	0.014716	0.011654	D22	1	1234	1.26	0.101	katG	b3942	catalase; hydroperoxidase HPI(I)	Cell processes	enzyme; Detoxification
2314	2495	-1.08	-0.033	3395	3898	2405	3646	0.021516	0.018221	B1	4	4129	1.18	0.072	yijE	b3943	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
987	1344	-1.36	-0.134	1736	1577	1166	1656	0.009773	0.008833	D1	4	4130	1.11	0.044	yijF	b3944	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4485	4393	1.02	0.009	3397	3228	4439	3313	0.019547	0.033640	K12	4	2254	-1.72	-0.236	gldA	b3945	"glycerol dehydrogenase, (NAD)"	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
425	382	1.00	0.000	581	590	403	586	0.003455	0.003057	D10	4	1474	1.13	0.053	talC	b3946	putative transaldolase	Putative enzymes	putative enzyme; Not classified
915	944	-1.03	-0.014	2099	2184	929	2141	0.012635	0.007043	F5	2	883	1.79	0.254	ptsA	b3947	PEP-protein phosphotransferase system enzyme I	Transport and binding proteins	"enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols"
3387	3210	1.06	0.023	3970	3793	3299	3882	0.022906	0.024996	F1	4	4131	-1.09	-0.038	yijI	b3948	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
99	124	-1.00	0.000	113	121	111	117	0.000689	0.000842	E5	2	115	-1.00	0.000	frwC	b3949	"PTS system, fructose-like enzyme II component"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
323	189	1.00	0.000	758	829	256	793	0.004681	0.001940	G5	2	116	1.56	0.193	frwB	b3950	PTS system fructose-like IIB component 1	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
4267	4538	-1.06	-0.027	4612	4324	4403	4468	0.026365	0.033361	F10	4	1475	-1.27	-0.102	pflD	b3951	formate acetyltransferase 2	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
1493	1476	1.01	0.005	838	978	1484	908	0.005357	0.011247	H10	4	1476	-2.10	-0.322	pflC	b3952	probable pyruvate formate lyase activating enzyme 2	Putative enzymes	"putative enzyme; Energy metabolism, carbon: Anaerobic respiration"
43	87	-1.00	0.000	-54	91	65	18	0.000108	0.000493	I5	2	117	-1.00	0.000	frwD	b3953	PTS system fructose-like IIB component 2	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
288	282	1.00	0.000	233	241	285	237	0.001399	0.002161	M1	4	295	-1.00	0.000	yijO	b3954	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
2343	2050	1.14	0.058	3997	4471	2196	4234	0.024984	0.016642	H1	4	4132	1.50	0.176	yijP	b3955	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7507	7891	-1.05	-0.022	7565	7066	7699	7316	0.043167	0.058341	J10	4	1477	-1.35	-0.131	ppc	b3956	phosphoenolpyruvate carboxylase	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
1651	1773	-1.07	-0.031	1853	1839	1712	1846	0.010895	0.012971	M12	1	1967	-1.19	-0.076	argE	b3957	acetylornithine deacetylase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Arginine
1371	1258	1.09	0.037	1439	1152	1314	1296	0.007646	0.009961	O12	1	1968	-1.30	-0.115	argC	b3958	N-acetyl-gamma-glutamylphosphate reductase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Arginine
3098	3503	-1.13	-0.053	2077	1951	3301	2014	0.011884	0.025011	A14	1	1969	-2.10	-0.323	argB	b3959	acetylglutamate kinase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Arginine
3733	4425	-1.19	-0.074	5765	5226	4079	5495	0.032426	0.030908	C14	1	1970	1.05	0.021	argH	b3960	argininosuccinate lyase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Arginine
197	331	-1.00	0.000	328	359	264	343	0.002025	0.002000	O17	2	168	1.00	0.000	oxyR	b3961	"activator, hydrogen peroxide-inducible genes"	Regulatory function	regulator; Global regulatory functions
4904	3910	1.25	0.098	3694	4045	4407	3870	0.022834	0.033395	J5	4	2613	-1.46	-0.165	udhA	b3962	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
7894	7538	1.05	0.020	11810	12064	7716	11937	0.070436	0.058469	J1	4	4133	1.20	0.081	yijC	b3963	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4196	4344	-1.04	-0.015	7548	7175	4270	7361	0.043437	0.032359	L1	4	4134	1.34	0.128	yijD	b3964	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6778	7010	-1.03	-0.015	10116	10179	6894	10147	0.059877	0.052243	H6	2	1825	1.15	0.059	trmA	b3965	tRNA (uracil-5-)-methyltransferase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
809	691	1.17	0.068	1210	1467	750	1339	0.007900	0.005684	H5	2	884	1.39	0.143	btuB	b3966	"outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23"	Transport and binding proteins	membrane; Outer membrane constituents
6	609	-1.22	-0.085	1002	935	307	968	0.005712	0.002329	E22	2	563	1.90	0.280	murI	b3967	"glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan"	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
4554	4261	1.07	0.029	6153	5555	4408	5854	0.034542	0.033401	G22	2	564	1.03	0.015	murB	b3972	UDP-N-acetylenolpyruvoylglucosamine reductase	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
875	735	1.19	0.075	1093	1012	805	1053	0.006212	0.006102	P15	1	2368	1.02	0.008	birA	b3973	biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Biotin"
1506	1375	1.09	0.039	1746	1350	1440	1548	0.009135	0.010916	B17	1	2369	-1.19	-0.077	coaA	b3974	pantothenate kinase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Pantothenate"
1870	1838	1.02	0.007	2706	3198	1854	2952	0.017418	0.014048	N1	4	4135	1.24	0.093	b3975	b3975	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
35799	26502	1.35	0.131	33949	40321	31150	37135	0.219123	0.236049	C1	4	1826	-1.08	-0.032	tufB	b3980	protein chain elongation factor EF-Tu (duplicate of tufA)	"Translation, post-translational modification"	factor; Proteins - translation and modification
333	727	-1.45	-0.162	1839	1763	530	1801	0.010626	0.004016	J5	2	885	2.65	0.423	secE	b3981	preprotein translocase	Transport and binding proteins	"transport; Protein, peptide secretion"
3120	3568	-1.14	-0.058	4207	4547	3344	4377	0.025829	0.025337	G7	2	1660	1.02	0.008	nusG	b3982	component in transcription antitermination	"Transcription, RNA processing and degradation"	"putative factor; RNA synthesis, modification, DNA transcription"
9258	9041	1.02	0.010	15987	17016	9149	16502	0.097372	0.069330	E1	4	1827	1.40	0.148	rplK	b3983	50S ribosomal subunit protein L11	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
3703	3766	-1.02	-0.007	5858	7120	3734	6489	0.038291	0.028298	G1	4	1828	1.35	0.131	rplA	b3984	"50S ribosomal subunit protein L1, regulates synthesis of L1 and L11"	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
7249	7575	-1.04	-0.019	14942	16292	7412	15617	0.092151	0.056167	I1	4	1829	1.64	0.215	rplJ	b3985	50S ribosomal subunit protein L10	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
14654	12854	1.14	0.057	33841	29609	13754	31725	0.187198	0.104223	K1	4	1830	1.80	0.254	rplL	b3986	50S ribosomal subunit protein L7/L12	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
7849	7474	1.05	0.021	9561	9536	7662	9549	0.056343	0.058060	I7	2	1661	-1.03	-0.013	rpoB	b3987	"RNA polymerase, beta subunit"	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
-9	185	-1.00	0.000	167	633	88	400	0.002359	0.000664	K7	2	1662	1.00	0.000	rpoC	b3988	"RNA polymerase, beta prime subunit"	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
342	213	1.00	0.000	517	365	277	441	0.002601	0.002099	F22	1	1235	1.00	0.000	htrC	b3989	heat shock protein htrC	Cell processes	"factor; Adaptations, atypical conditions"
3009	2717	1.11	0.044	2058	1874	2863	1966	0.011602	0.021694	D17	1	2370	-1.87	-0.272	thiH	b3990	"thiamin biosynthesis, thiazole moiety"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thiamin"
1854	1671	1.11	0.045	3086	2953	1763	3020	0.017817	0.013359	F17	1	2371	1.33	0.125	thiG	b3991	"thiamin biosynthesis, thiazole moiety"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thiamin"
387	401	-1.00	0.000	415	521	394	468	0.002761	0.002986	H17	1	2372	-1.00	0.000	thiF	b3992	"thiamin biosynthesis, thiazole moiety"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thiamin"
1237	1390	-1.12	-0.051	2638	2663	1314	2650	0.015639	0.009955	J17	1	2373	1.57	0.196	thiE	b3993	"thiamin biosynthesis, thiazole moiety"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thiamin"
151	143	1.00	0.000	244	226	147	235	0.001387	0.001114	L17	1	2374	1.00	0.000	thiC	b3994	"thiamin biosynthesis, pyrimidine moiety"	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Thiamin"
1562	1312	1.19	0.076	1100	1360	1437	1230	0.007257	0.010889	O1	4	296	-1.50	-0.176	yjaE	b3995	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
4944	5285	-1.07	-0.029	3783	4411	5114	4097	0.024174	0.038756	H12	2	4136	-1.60	-0.205	yjaD	b3996	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
841	734	1.15	0.059	1155	1065	787	1110	0.006550	0.005966	N17	1	2375	1.10	0.041	hemE	b3997	uroporphyrinogen decarboxylase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin"
1986	1974	1.01	0.003	2583	2752	1980	2668	0.015741	0.015002	B3	4	4137	1.05	0.021	nfi	b3998	endonuclease V (deoxyinosine 3'endoduclease)	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
459	814	-1.63	-0.211	1035	1273	637	1154	0.006810	0.004824	D3	4	4138	1.41	0.150	yjaG	b3999	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5934	6048	-1.02	-0.008	8579	8859	5991	8719	0.051446	0.045399	M15	1	1599	1.13	0.054	hupA	b4000	DNA-binding protein HU-alpha (HU-2)	"DNA replication, repair, restriction/modification"	"factor; Basic proteins - synthesis, modification"
631	720	-1.14	-0.057	794	734	676	764	0.004506	0.005119	F3	4	4139	-1.14	-0.055	yjaH	b4001	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
17047	15744	1.08	0.035	14186	14006	16395	14096	0.083177	0.124239	H3	4	4140	-1.49	-0.174	yjaI	b4002	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3306	3508	-1.06	-0.026	5866	5232	3407	5549	0.032741	0.025816	L10	4	1478	1.27	0.103	hydH	b4003	"sensor kinase for HydG, hydrogenase 3 activity"	Energy metabolism	"enzyme; Energy metabolism, carbon: Fermentation"
290	503	-1.01	-0.003	267	385	396	326	0.001923	0.003003	N10	4	1479	-1.00	0.000	hydG	b4004	response regulator of hydrogenase 3 activity (sensor HydH)	Regulatory function	"regulator; Energy metabolism, carbon: Fermentation"
987	1268	-1.29	-0.109	1225	1020	1127	1123	0.006624	0.008543	G4	2	2028	-1.29	-0.110	purD	b4005	phosphoribosylglycinamide synthetase = GAR synthetase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
945	1493	-1.58	-0.199	1009	1656	1219	1332	0.007861	0.009236	I4	2	2029	-1.17	-0.070	purH	b4006	phosphoribosylaminoimidazolecarboxamide formyltransferase = AICAR formyltransferase; IMP cyclohydrolase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
5242	5409	-1.03	-0.014	3882	3396	5326	3639	0.021471	0.040356	J3	4	4141	-1.88	-0.274	yjaA	b4011	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2930	3077	-1.05	-0.021	3619	3489	3004	3554	0.020972	0.022760	L3	4	4142	-1.09	-0.036	yjaB	b4012	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
7448	6951	1.07	0.030	5798	6437	7199	6118	0.036099	0.054556	E14	1	1971	-1.51	-0.179	metA	b4013	homoserine transsuccinylase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Methionine
8880	7485	1.19	0.074	14418	12991	8183	13705	0.080867	0.062007	M12	4	2255	1.30	0.115	aceB	b4014	malate synthase A	Central intermediary metabolism	enzyme; Central intermediary metabolism: Glyoxylate bypass
3976	3462	1.15	0.060	7184	6080	3719	6632	0.039133	0.028182	O12	4	2256	1.39	0.143	aceA	b4015	isocitrate lyase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Glyoxylate bypass
4667	5474	-1.17	-0.069	4510	4278	5070	4394	0.025929	0.038421	A14	4	2257	-1.48	-0.171	aceK	b4016	isocitrate dehydrogenase kinase/phosphatase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Glyoxylate bypass
5501	5939	-1.08	-0.033	4337	4312	5720	4325	0.025518	0.043347	C18	2	2082	-1.70	-0.230	arp	b4017	regulator of acetyl CoA synthetase	Regulatory function	regulator; Fatty acid and phosphatidic acid biosynthesis
9497	8898	1.07	0.028	9656	9962	9197	9809	0.057879	0.069694	C14	4	2258	-1.20	-0.081	iclR	b4018	repressor of aceBA operon	Regulatory function	regulator; Central intermediary metabolism: Glyoxylate bypass
455	371	1.00	0.000	516	391	413	454	0.002678	0.003131	G14	1	1972	-1.04	-0.019	metH	b4019	"B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metF"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Methionine
24701	24120	1.02	0.010	29060	28083	24410	28571	0.168590	0.184975	A14	3	625	-1.10	-0.040	yjbB	b4020	putative alpha helix protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
727	877	-1.21	-0.082	1125	1132	802	1129	0.006662	0.006078	M1	4	1831	1.10	0.040	pepE	b4021	"peptidase E, a dipeptidase where amino-terminal residue is aspartate"	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
17303	13975	1.24	0.093	26533	23195	15639	24864	0.146713	0.118511	N3	4	4143	1.24	0.093	yjbC	b4022	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
628	513	1.23	0.088	1622	1311	570	1466	0.008651	0.004323	P3	4	4144	2.00	0.301	yjbD	b4023	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1805	1777	1.02	0.007	1791	1638	1791	1715	0.010117	0.013571	I14	1	1973	-1.34	-0.128	lysC	b4024	"aspartokinase III, lysine sensitive"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Lysine
1283	1396	-1.09	-0.037	1266	1374	1339	1320	0.007788	0.010149	P10	4	1480	-1.30	-0.115	pgi	b4025	glucosephosphate isomerase	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
961	1484	-1.54	-0.189	1368	1575	1222	1471	0.008682	0.009262	B5	4	4145	-1.07	-0.028	yjbE	b4026	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
960	806	1.19	0.076	698	643	883	671	0.003958	0.006694	D5	4	4146	-1.69	-0.228	yjbF	b4027	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1007	1068	-1.06	-0.026	1241	1306	1037	1274	0.007515	0.007862	F5	4	4147	-1.05	-0.020	yjbG	b4028	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2384	2876	-1.21	-0.081	1405	2053	2630	1729	0.010204	0.019929	H5	4	4148	-1.95	-0.291	yjbH	b4029	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1788	2049	-1.15	-0.059	2643	2261	1919	2452	0.014468	0.014540	J5	4	4149	-1.00	-0.002	yjbA	b4030	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
536	733	-1.37	-0.136	1766	1738	635	1752	0.010337	0.004808	L5	2	886	2.15	0.332	xylE	b4031	xylose-proton symport	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1677	1873	-1.12	-0.048	2139	2261	1775	2200	0.012981	0.013452	N5	2	887	-1.04	-0.015	malG	b4032	"part of maltose permease, inner membrane"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
936	1364	-1.46	-0.164	1377	1740	1150	1558	0.009194	0.008714	P5	2	888	1.05	0.023	malF	b4033	"part of maltose permease, periplasmic"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
156	421	-1.00	0.000	894	1104	288	999	0.005895	0.002186	B7	2	889	1.97	0.293	malE	b4034	periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
931	928	1.00	0.001	2767	2510	929	2638	0.015568	0.007043	D7	2	890	2.21	0.344	malK	b4035	ATP-binding component of transport system for maltose	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
192	414	-1.00	0.000	-124	595	303	235	0.001387	0.002295	F7	2	891	-1.00	0.000	lamB	b4036	phage lambda receptor protein; maltose high-affinity receptor	Transport and binding proteins	"IS, phage, Tn; Transport of small molecules: Carbohydrates, organic acids, alcohols"
1557	2067	-1.33	-0.123	2410	2607	1812	2509	0.014804	0.013730	K5	2	118	1.08	0.033	malM	b4037	periplasmic protein of mal regulon	Carbon compound catabolism	phenotype; Degradation of small molecules: Carbon compounds
499	483	1.00	0.000	442	394	491	418	0.002465	0.003720	L5	4	4150	-1.24	-0.093	yjbI	b4038	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
646	689	-1.07	-0.028	829	938	668	884	0.005214	0.005059	P17	1	2376	1.03	0.013	ubiC	b4039	chorismate lyase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
6005	6524	-1.09	-0.036	3277	4194	6264	3736	0.022043	0.047470	B19	1	2377	-2.15	-0.333	ubiA	b4040	4-hydroxybenzoate-octaprenyltransferase	"Biosynthesis of cofactors, prosthetic groups and carriers"	"enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone"
4274	4722	-1.10	-0.043	7260	8030	4498	7645	0.045112	0.034088	E18	2	2083	1.32	0.122	plsB	b4041	glycerol-3-phosphate acyltransferase	Fatty acid and phospholipid metabolism	"enzyme; Macromolecule synthesis, modification: Phospholipids"
553	652	-1.18	-0.071	601	727	603	664	0.003918	0.004567	G18	2	2084	-1.17	-0.067	dgkA	b4042	diacylglycerol kinase	Fatty acid and phospholipid metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
1662	1536	1.08	0.034	2683	2980	1599	2831	0.016705	0.012119	A19	2	169	1.38	0.139	lexA	b4043	regulator for SOS(lexA) regulon	Regulatory function	regulator; Global regulatory functions
2223	2138	1.04	0.017	2909	2940	2181	2925	0.017258	0.016525	N5	4	4151	1.04	0.019	dinF	b4044	DNA-damage-inducible protein F	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
387	441	-1.00	0.000	993	893	414	943	0.005563	0.003138	P5	4	4152	1.77	0.249	yjbJ	b4045	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1989	1583	1.26	0.099	1450	1760	1786	1605	0.009471	0.013533	F21	3	1043	-1.43	-0.155	yjbK	b4046	putative regulator	Putative regulatory proteins	putative regulator; Not classified
50	153	-1.00	0.000	107	87	102	97	0.000573	0.000771	B7	4	4153	-1.00	0.000	yjbL	b4047	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
910	1091	-1.20	-0.079	1435	1446	1000	1441	0.008501	0.007579	D7	4	4154	1.12	0.050	yjbM	b4048	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
11513	10760	1.07	0.029	12621	11528	11137	12074	0.071245	0.084390	F7	4	4155	-1.18	-0.074	yjbN	b4049	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
750	805	-1.07	-0.031	571	473	777	522	0.003080	0.005889	H7	4	4156	-1.91	-0.281	yjbO	b4050	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3298	3109	1.06	0.026	5578	5680	3204	5629	0.033217	0.024278	B12	4	1481	1.37	0.136	qor	b4051	quinone oxidoreductase	Energy metabolism	"enzyme; Energy metabolism, carbon: Electron transport"
2150	1924	1.12	0.048	3283	3410	2037	3346	0.019746	0.015436	O15	1	1600	1.28	0.107	dnaB	b4052	replicative DNA helicase; part of primosome	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
1451	1271	1.14	0.058	1395	1350	1361	1372	0.008099	0.010312	K14	1	1974	-1.27	-0.105	alr	b4053	alanine racemase 1	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Alanine
3997	3996	1.00	0.000	3543	2592	3997	3067	0.018100	0.030286	M14	1	1975	-1.67	-0.224	tyrB	b4054	"tyrosine aminotransferase, tyrosine repressible"	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Tyrosine
1045	1216	-1.16	-0.066	1393	1411	1131	1402	0.008272	0.008568	J7	4	4157	-1.04	-0.015	aphA	b4055	diadenosine tetraphosphatase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Nucleotide hydrolysis
9768	9119	1.07	0.030	11104	14353	9444	12728	0.075106	0.071564	L7	4	4158	1.05	0.021	yjbQ	b4056	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2274	2355	-1.04	-0.015	3944	3772	2315	3858	0.022764	0.017540	N7	4	4159	1.30	0.113	yjbR	b4057	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1538	1547	-1.01	-0.002	1952	1628	1543	1790	0.010563	0.011691	A17	1	1601	-1.11	-0.044	uvrA	b4058	excision nuclease subunit A	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1463	1330	1.10	0.041	2146	2121	1397	2133	0.012589	0.010583	C17	1	1602	1.19	0.075	ssb	b4059	ssDNA-binding protein	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
361	474	-1.00	0.000	1330	1209	418	1269	0.007491	0.003164	P7	4	4160	2.37	0.374	yjcB	b4060	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
872	1127	-1.29	-0.112	1297	1342	999	1319	0.007785	0.007572	B9	4	4161	1.03	0.012	yjcC	b4061	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
491	537	-1.07	-0.031	199	392	514	296	0.001745	0.003895	C19	2	170	-1.30	-0.113	soxS	b4062	regulation of superoxide response regulon	Regulatory function	regulator; Global regulatory functions
318	261	1.00	0.000	324	440	289	382	0.002253	0.002191	E19	2	171	1.00	0.000	soxR	b4063	redox-sensing activator of soxS	Regulatory function	regulator; Global regulatory functions
5677	6172	-1.09	-0.036	4356	4045	5925	4200	0.024785	0.044896	D9	4	4162	-1.81	-0.258	yjcD	b4064	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
414	464	-1.00	0.000	604	605	439	605	0.003568	0.003324	F9	4	4163	1.07	0.031	yjcE	b4065	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
173	157	1.00	0.000	136	156	165	146	0.000863	0.001252	H9	4	4164	-1.00	0.000	yjcF	b4066	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2874	3173	-1.10	-0.043	2786	3033	3023	2910	0.017169	0.022909	J9	4	4165	-1.33	-0.125	yjcG	b4067	putative transport protein	Putative transport proteins	putative transport; Not classified
925	1184	-1.28	-0.107	1264	1919	1054	1592	0.009393	0.007988	L9	4	4166	1.18	0.070	yjcH	b4068	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
809	875	-1.08	-0.034	858	864	842	861	0.005081	0.006382	I18	2	2085	-1.26	-0.099	acs	b4069	acetyl-CoA synthetase	Energy metabolism	enzyme; Fatty acid and phosphatidic acid biosynthesis
10555	10798	-1.02	-0.010	31534	31219	10676	31377	0.185146	0.080904	D12	4	1482	2.29	0.360	nrfA	b4070	periplasmic cytochrome c(552): plays a role in nitrite reduction	Energy metabolism	"carrier; Energy metabolism, carbon: Electron transport"
1612	1420	1.14	0.055	4393	4560	1516	4477	0.026415	0.011487	F12	4	1483	2.30	0.362	nrfB	b4071	formate-dependent nitrite reductase; a penta-haeme cytochrome c	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
1601	1337	1.20	0.078	3244	3249	1469	3246	0.019156	0.011130	H12	4	1484	1.72	0.236	nrfC	b4072	formate-dependent nitrite reductase; Fe-S centers	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
2794	2822	-1.01	-0.004	5615	5400	2808	5508	0.032498	0.021277	J12	4	1485	1.53	0.184	nrfD	b4073	formate-dependent nitrate reductase complex; transmembrane protein	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
88930	85298	1.04	0.018	77137	72412	87114	74774	0.441222	0.660131	L12	4	1486	-1.50	-0.175	nrfE	b4074	formate-dependent nitrite reductase; possible assembly function	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
5607	5211	1.08	0.032	6470	6633	5409	6552	0.038660	0.040987	N12	4	1487	-1.06	-0.025	nrfF	b4075	part of formate-dependent nitrite reductase complex	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
1807	1626	1.11	0.046	2172	2283	1717	2228	0.013146	0.013009	P12	4	1488	1.01	0.005	nrfG	b4076	part of formate-dependent nitrite reductase complex	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
155	230	-1.00	0.000	331	367	192	349	0.002059	0.001457	H7	2	892	1.00	0.000	gltP	b4077	glutamate-aspartate symport protein	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
600	562	1.07	0.028	923	942	581	933	0.005502	0.004402	N9	4	4167	1.25	0.097	yjcO	b4078	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8436	8242	1.02	0.010	12518	11492	8339	12005	0.070837	0.063192	B14	4	1489	1.12	0.050	fdhF	b4079	selenopolypeptide subunit of formate dehydrogenase H	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
3317	3527	-1.06	-0.027	3853	4163	3422	4008	0.023649	0.025928	L5	4	2614	-1.10	-0.040	yjcP	b4080	putative enzyme	"Hypothetical, unclassified, unknown"	orf; Not classified
1102	993	1.11	0.045	2109	2088	1048	2099	0.012384	0.007938	N5	4	2615	1.56	0.193	yjcQ	b4081	putative enzyme	"Hypothetical, unclassified, unknown"	orf; Not classified
600	621	-1.03	-0.015	500	584	611	542	0.003199	0.004628	H22	1	1236	-1.45	-0.160	yjcR	b4082	putative membrane protein	putative membrane protein	putative membrane; Not classified
374	272	1.00	0.000	517	446	323	482	0.002843	0.002447	P9	4	4168	1.00	0.000	yjcS	b4083	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
541	543	-1.00	-0.001	493	520	542	506	0.002988	0.004106	J22	1	1237	-1.37	-0.136	yjcT	b4084	putative NAGC-like transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
34250	28937	1.18	0.073	122727	100148	31593	111438	0.657562	0.239407	D14	4	1490	2.75	0.439	yjcU	b4085	putative epimerase	Putative enzymes	putative enzyme; Not classified
684	603	1.13	0.055	714	534	644	624	0.003683	0.004877	H21	3	1044	-1.32	-0.122	yjcV	b4086	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
429	317	1.00	0.000	611	710	373	660	0.003895	0.002829	J21	3	1045	1.30	0.113	yjcW	b4087	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
328	195	1.00	0.000	346	350	262	348	0.002053	0.001984	L21	3	1046	1.00	0.000	yjcX	b4088	putative LACI-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
3260	2445	1.33	0.125	5297	5638	2853	5468	0.032262	0.021617	F14	4	1491	1.49	0.174	rpiR	b4089	transcriptional repressor of rpiB expression	Regulatory function	"regulator; Central intermediary metabolism: Non-oxidative branch, pentose pathway"
2475	3240	-1.31	-0.117	2753	2447	2858	2600	0.015343	0.021656	M5	2	119	-1.41	-0.150	rpiB	b4090	ribose 5-phosphate isomerase B	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway"
247	161	1.00	0.000	47	116	204	81	0.000478	0.001547	B11	4	4169	-1.00	0.000	phnQ	b4091	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4991	4780	1.04	0.019	6068	6017	4886	6043	0.035656	0.037022	E14	4	2259	-1.04	-0.016	phnP	b4092	phosphonate metabolism	Central intermediary metabolism	phenotype; Central intermediary metabolism: Phosphorus compounds
4329	5352	-1.24	-0.092	5465	6210	4840	5838	0.034447	0.036680	G14	4	2260	-1.06	-0.027	phnO	b4093	"putative regulator, phn operon"	Putative regulatory proteins	putative regulator; Not classified
5734	5413	1.06	0.025	7156	7520	5574	7338	0.043299	0.042236	I14	4	2261	1.03	0.011	phnN	b4094	ATP-binding component of phosphonate transport	Transport and binding proteins	transport; Central intermediary metabolism: Phosphorus compounds
3221	3319	-1.03	-0.013	3495	2957	3270	3226	0.019034	0.024781	K14	4	2262	-1.30	-0.115	phnM	b4095	phosphonate metabolism	Central intermediary metabolism	phenotype; Central intermediary metabolism: Phosphorus compounds
1861	1776	1.05	0.020	2332	2280	1819	2306	0.013608	0.013782	M14	4	2263	-1.01	-0.006	phnL	b4096	ATP-binding component of phosphonate transport	Transport and binding proteins	transport; Central intermediary metabolism: Phosphorus compounds
749	792	-1.06	-0.024	662	827	771	745	0.004393	0.005839	O14	4	2264	-1.33	-0.124	phnK	b4097	ATP-binding component of phosphonate transport	Transport and binding proteins	transport; Central intermediary metabolism: Phosphorus compounds
778	714	1.09	0.037	1660	1848	746	1754	0.010349	0.005650	A16	4	2265	1.83	0.263	phnJ	b4098	phosphonate metabolism	Central intermediary metabolism	putative enzyme; Central intermediary metabolism: Phosphorus compounds
9618	9404	1.02	0.010	16441	13386	9511	14913	0.087999	0.072073	C16	4	2266	1.22	0.087	phnI	b4099	phosphonate metabolism	Central intermediary metabolism	phenotype; Central intermediary metabolism: Phosphorus compounds
4149	4347	-1.05	-0.020	5311	5375	4248	5343	0.031528	0.032188	E16	4	2267	-1.02	-0.009	phnH	b4100	phosphonate metabolism	Central intermediary metabolism	phenotype; Central intermediary metabolism: Phosphorus compounds
5488	4865	1.13	0.052	8147	6886	5176	7516	0.044352	0.039226	G16	4	2268	1.13	0.053	phnG	b4101	phosphonate metabolism	Central intermediary metabolism	phenotype; Central intermediary metabolism: Phosphorus compounds
2396	2517	-1.05	-0.021	3473	2459	2457	2966	0.017503	0.018615	I16	4	2269	-1.06	-0.027	phnF	b4102	putative transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
130	72	1.00	0.000	-52	113	101	31	0.000181	0.000766	D11	4	4170	-1.00	0.000	b4103	b4103	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
581	530	1.10	0.040	1000	1050	555	1025	0.006048	0.004209	J7	2	893	1.44	0.157	phnE	b4104	membrane channel protein component of Pn transporter	Transport and binding proteins	transport; Transport of small molecules: Anions
2759	3642	-1.32	-0.121	6265	6430	3200	6348	0.037455	0.024252	L7	2	894	1.54	0.189	phnD	b4105	periplasmic binding protein component of Pn transporter	Transport and binding proteins	transport; Transport of small molecules: Anions
1462	2207	-1.51	-0.179	5003	5370	1835	5187	0.030604	0.013901	N7	2	895	2.20	0.343	phnC	b4106	ATP-binding component of phosphonate transport	Transport and binding proteins	transport; Central intermediary metabolism: Phosphorus compounds
951	1057	-1.11	-0.046	1531	1518	1004	1525	0.008997	0.007607	F11	4	4171	1.18	0.073	phnB	b4107	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
766	786	-1.03	-0.011	515	476	776	496	0.002925	0.005879	H11	4	4172	-1.96	-0.292	phnA	b4108	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
398	256	1.00	0.000	697	531	327	614	0.003624	0.002476	C14	3	626	1.21	0.082	yjdA	b4109	putative vimentin	Putative enzymes	phenotype; Not classified
32	155	-1.00	0.000	89	270	94	179	0.001057	0.000711	J11	4	4173	1.00	0.000	yjcZ	b4110	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2174	2407	-1.11	-0.044	2492	2501	2290	2496	0.014731	0.017355	P7	2	896	-1.18	-0.071	proP	b4111	low-affinity transport system; proline permease II	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1513	1039	1.46	0.163	1274	1429	1276	1352	0.007975	0.009669	M7	2	1663	-1.21	-0.084	basS	b4112	sensor protein for basR	"Transcription, RNA processing and degradation"	"enzyme; RNA synthesis, modification, DNA transcription"
6896	8111	-1.18	-0.070	10634	9592	7503	10113	0.059674	0.056858	O7	2	1664	1.05	0.021	basR	b4113	"transcriptional regulatory protein, member of 2-component regulatory system,"	Regulatory function	"regulator; RNA synthesis, modification, DNA transcription"
730	634	1.15	0.062	790	845	682	818	0.004825	0.005170	L11	4	4174	-1.07	-0.030	yjdB	b4114	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1264	1204	1.05	0.021	1163	1437	1234	1300	0.007670	0.009352	N21	3	1047	-1.22	-0.086	yjdE	b4115	"putative amino acid/amine transport protein, cryptic"	Putative transport proteins	putative transport; Not classified
554	683	-1.23	-0.091	1532	1620	619	1576	0.009299	0.004688	A3	4	297	1.98	0.297	adiY	b4116	putative ARAC-type regulatory protein	Putative regulatory proteins	putative regulator; Not classified
3940	3805	1.04	0.015	4302	4572	3872	4437	0.026182	0.029344	O14	1	1976	-1.12	-0.050	adiA	b4117	biodegradative arginine decarboxylase	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
286	375	-1.00	0.000	173	378	330	276	0.001627	0.002504	O5	2	120	-1.00	0.000	melR	b4118	regulator of melibiose operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
1515	1728	-1.14	-0.057	4833	4787	1622	4810	0.028384	0.012288	A7	2	121	2.31	0.364	melA	b4119	alpha-galactosidase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
999	995	1.00	0.002	2524	2921	997	2722	0.016064	0.007554	B9	2	897	2.13	0.328	melB	b4120	melibiose permease II	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
225	297	-1.00	0.000	214	308	261	261	0.001540	0.001978	N11	4	4175	-1.00	0.000	yjdF	b4121	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
20361	16524	1.23	0.091	21763	19303	18443	20533	0.121160	0.139753	H14	4	1492	-1.15	-0.062	fumB	b4122	fumarase B= fumarate hydratase Class I; anaerobic isozyme	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: TCA cycle"
515	581	-1.13	-0.052	1034	1267	548	1151	0.006789	0.004152	D9	2	898	1.64	0.214	dcuB	b4123	anaerobic dicarboxylate transport	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
338	278	1.00	0.000	498	543	308	520	0.003070	0.002335	C3	4	298	1.02	0.010	yjdG	b4124	putative 2-component transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
34923	27139	1.29	0.110	88382	89310	31031	88846	0.524254	0.235149	E3	4	299	2.23	0.348	yjdH	b4125	putative 2-component sensor protein	Putative regulatory proteins	putative regulator; Not classified
1042	921	1.13	0.053	1134	1388	982	1261	0.007441	0.007438	P11	4	4176	1.00	0.000	yjdI	b4126	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
463	463	-1.00	0.000	350	393	463	371	0.002191	0.003507	B13	4	4177	-1.17	-0.068	yjdJ	b4127	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
63	54	1.00	0.000	78	57	59	68	0.000400	0.000443	D13	4	4178	-1.00	0.000	yjdK	b4128	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
820	849	-1.04	-0.015	1193	1270	834	1232	0.007267	0.006323	O1	4	1832	1.15	0.060	lysU	b4129	"lysine tRNA synthetase, inducible; heat shock protein"	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
5199	5031	1.03	0.014	4817	5668	5115	5243	0.030935	0.038761	P21	3	1048	-1.25	-0.098	yjdL	b4130	putative peptide transporter	Putative transport proteins	putative transport; Not classified
1332	1269	1.05	0.021	2108	2359	1300	2233	0.013178	0.009852	A16	1	1977	1.34	0.126	cadA	b4131	lysine decarboxylase 1	Carbon compound catabolism	enzyme; Degradation of small molecules: Amino acids
470	374	1.00	0.000	846	710	422	778	0.004590	0.003201	F9	2	899	1.43	0.157	cadB	b4132	transport of lysine/cadaverine	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1758	1841	-1.05	-0.020	3086	2754	1800	2920	0.017228	0.013638	C16	1	1978	1.26	0.102	cadC	b4133	transcriptional activator of cad operon	Regulatory function	regulator; Degradation of small molecules: Amino acids
1229	1359	-1.11	-0.044	1852	1817	1294	1834	0.010825	0.009806	F13	4	4179	1.10	0.043	yjdC	b4135	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2304	2057	1.12	0.049	2154	2360	2180	2257	0.013320	0.016521	K16	4	2270	-1.24	-0.094	dsbD	b4136	thiol:disulfide interchange protein; copper tolerance	Putative enzymes	putative enzyme; Central intermediary metabolism: Sulfur metabolism
817	624	1.31	0.117	543	558	720	551	0.003249	0.005458	L22	1	1238	-1.68	-0.225	cutA	b4137	divalent cation tolerance protein; cytochrome c biogenesis	Cell processes	"phenotype; Adaptations, atypical conditions"
425	668	-1.34	-0.126	944	962	547	953	0.005623	0.004141	H9	2	900	1.36	0.133	dcuA	b4138	anaerobic dicarboxylate transport	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
2629	2404	1.09	0.039	3220	3082	2516	3151	0.018592	0.019068	M16	4	2271	-1.03	-0.011	aspA	b4139	aspartate ammonia-lyase (aspartase)	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
573	660	-1.15	-0.061	1196	1339	616	1268	0.007480	0.004671	H13	4	4180	1.60	0.204	b4140	b4140	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3280	3099	1.06	0.025	3779	3306	3189	3543	0.020904	0.024168	B23	3	1049	-1.16	-0.063	yjeH	b4141	putative transport	Putative transport proteins	putative transport; Not classified
1698	2019	-1.19	-0.075	3442	4178	1859	3810	0.022480	0.014084	N22	1	1239	1.60	0.203	mopB	b4142	"GroES, 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP, suppressing its ATPase activity"	Cell processes	factor; Chaperones
6544	7006	-1.07	-0.030	12669	13690	6775	13179	0.077767	0.051341	P22	1	1240	1.51	0.180	mopA	b4143	"GroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein"	Cell processes	factor; Chaperones
2124	2016	1.05	0.023	2976	2967	2070	2971	0.017534	0.015686	J13	4	4181	1.12	0.048	yjeI	b4144	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
668	658	1.01	0.006	948	941	663	944	0.005573	0.005021	L13	4	4182	1.11	0.045	yjeJ	b4145	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
462	466	-1.00	0.000	410	401	464	405	0.002392	0.003517	N13	4	4183	-1.17	-0.069	yjeK	b4146	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1285	1224	1.05	0.021	1769	2032	1255	1900	0.011214	0.009506	A3	4	1833	1.18	0.072	efp	b4147	elongation factor P (EF-P)	"Translation, post-translational modification"	factor; Proteins - translation and modification
1209	1413	-1.17	-0.068	1694	1840	1311	1767	0.010426	0.009932	J15	4	2653	1.05	0.021	sugE	b4148	"suppresses groEL, may be chaperone"	Putative factors	putative factor; Not classified
5798	4783	1.21	0.084	6799	5726	5290	6263	0.036953	0.040090	I4	3	589	-1.08	-0.035	blc	b4149	outer membrane lipoprotein (lipocalin)	Cell structure	"membrane; Macromolecule synthesis, modification: Lipoprotein"
3626	3348	1.08	0.035	3273	2812	3487	3042	0.017952	0.026423	B24	1	1241	-1.47	-0.168	ampC	b4150	beta-lactamase; penicillin resistance	Cell processes	enzyme; Drug/analog sensitivity
1174	1289	-1.10	-0.040	2713	2604	1232	2659	0.015688	0.009333	J14	4	1493	1.68	0.226	frdD	b4151	"fumarate reductase, anaerobic, membrane anchor polypeptide"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
90	113	-1.00	0.000	147	277	102	212	0.001252	0.000770	L14	4	1494	1.00	0.000	frdC	b4152	"fumarate reductase, anaerobic, membrane anchor polypeptide"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
780	694	1.12	0.051	871	917	737	894	0.005274	0.005585	N14	4	1495	-1.06	-0.025	frdB	b4153	"fumarate reductase, anaerobic, iron-sulfur protein subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
2425	2257	1.07	0.031	3472	3116	2341	3294	0.019436	0.017742	P14	4	1496	1.10	0.040	frdA	b4154	"fumarate reductase, anaerobic, flavoprotein subunit"	Energy metabolism	"enzyme; Energy metabolism, carbon: Anaerobic respiration"
747	687	1.09	0.036	730	722	717	726	0.004284	0.005433	P13	4	4184	-1.27	-0.103	yjeA	b4155	putative lysyl-tRNA synthetase	Putative enzymes	"putative enzyme; Aminoacyl tRNA synthetases, tRNA modification"
1884	1725	1.09	0.038	3471	3305	1804	3388	0.019991	0.013673	D23	3	1050	1.46	0.165	yjeM	b4156	putative transport	Putative transport proteins	putative transport; Not classified
35	-13	1.00	0.000	-57	26	11	-15	-0.000090	0.000084	B15	4	4185	-1.00	0.000	yjeN	b4157	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
113	126	-1.00	0.000	124	97	120	110	0.000652	0.000906	D15	4	4186	-1.00	0.000	yjeO	b4158	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4427	3836	1.15	0.062	10304	9050	4131	9677	0.057100	0.031306	E14	3	627	1.82	0.261	yjeP	b4159	putative periplasmic binding protein	Putative transport proteins	putative transport; Not classified
5860	5269	1.11	0.046	4608	4876	5565	4742	0.027979	0.042167	K18	2	2086	-1.51	-0.178	psd	b4160	phosphatidylserine decarboxylase; phospholipid synthesis	Fatty acid and phospholipid metabolism	"enzyme; Macromolecule synthesis, modification: Phospholipids"
539	467	1.08	0.033	717	646	503	681	0.004020	0.003810	F15	4	4187	1.06	0.023	yjeQ	b4161	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
590	616	-1.04	-0.019	1119	1132	603	1126	0.006643	0.004570	H15	4	4188	1.45	0.162	yjeR	b4162	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
563	744	-1.32	-0.121	1079	1108	653	1094	0.006454	0.004951	J15	4	4189	1.30	0.115	yjeS	b4166	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1054	848	1.24	0.095	848	1102	951	975	0.005754	0.007207	L15	4	4190	-1.25	-0.098	yjeF	b4167	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1736	1569	1.11	0.044	2128	3539	1653	2834	0.016721	0.012523	N15	4	4191	1.34	0.126	yjeE	b4168	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1580	1685	-1.07	-0.028	1291	1719	1632	1505	0.008881	0.012370	I22	2	565	-1.39	-0.144	amiB	b4169	N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
4093	4151	-1.01	-0.006	3655	2848	4122	3252	0.019187	0.031235	E17	1	1603	-1.63	-0.212	mutL	b4170	enzyme in methyl-directed mismatch repair	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
3055	2548	1.20	0.079	4335	5198	2802	4766	0.028124	0.021231	C3	4	1834	1.32	0.122	miaA	b4171	delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
7127	6495	1.10	0.040	20764	19327	6811	20045	0.118280	0.051614	G2	1	388	2.29	0.360	hfq	b4172	"host factor I for bacteriophage Q beta replication, a growth-related protein"	"Phage, transposon, or plasmid"	putative factor; Phage-related functions and prophages
2338	2471	-1.06	-0.024	2327	4379	2405	3353	0.019785	0.018221	E3	4	1835	1.09	0.036	hflX	b4173	GTP - binding subunit of protease specific for phage lambda cII repressor	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
4726	5309	-1.12	-0.050	8565	5438	5017	7001	0.041313	0.038020	G3	4	1836	1.09	0.036	hflK	b4174	protease specific for phage lambda cII repressor	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
1769	2382	-1.35	-0.129	4514	4503	2075	4508	0.026603	0.015725	I3	4	1837	1.69	0.228	hflC	b4175	protease specific for phage lambda cII repressor	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
1244	1139	1.09	0.038	1808	2131	1192	1970	0.011622	0.009031	P15	4	4192	1.29	0.110	yjeT	b4176	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3911	3483	1.12	0.050	4032	3537	3697	3784	0.022331	0.028015	K4	2	2030	-1.25	-0.098	purA	b4177	adenylosuccinate synthetase	Nucleotide biosynthesis and metabolism	enzyme; Purine ribonucleotide biosynthesis
100	58	1.00	0.000	-5	71	79	33	0.000195	0.000597	B17	4	4193	-1.00	0.000	yjeB	b4178	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6242	6105	1.02	0.010	9121	9346	6174	9233	0.054482	0.046781	D17	4	4194	1.16	0.066	vacB	b4179	putative enzyme	Putative enzymes	putative enzyme; Not classified
950	1075	-1.13	-0.054	921	965	1013	943	0.005565	0.007675	F17	4	4195	-1.38	-0.140	yjfH	b4180	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
261	227	1.00	0.000	284	211	244	248	0.001463	0.001848	H17	4	4196	-1.00	0.000	yjfI	b4181	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
317	151	1.00	0.000	852	442	234	647	0.003818	0.001772	G14	3	628	1.27	0.105	yjfJ	b4182	putative alpha helical protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
588	401	1.18	0.070	596	370	495	483	0.002851	0.003749	J17	4	4197	-1.25	-0.097	yjfK	b4183	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
447	455	-1.00	0.000	558	422	451	490	0.002891	0.003416	L17	4	4198	-1.14	-0.056	yjfL	b4184	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5526	4703	1.17	0.070	6886	6406	5114	6646	0.039215	0.038756	N17	4	4199	1.01	0.005	yjfM	b4185	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
532	476	1.06	0.027	884	844	504	864	0.005096	0.003821	P5	4	2616	1.33	0.125	yjfC	b4186	putative synthetase/amidase	Putative enzymes	putative enzyme; Not classified
31903	25800	1.24	0.092	35404	24990	28852	30197	0.178183	0.218630	G17	1	1604	-1.23	-0.089	aidB	b4187	putative acyl coenzyme A dehydrogenase	Putative enzymes	putative enzyme; Not classified
881	919	-1.04	-0.018	1536	1361	900	1448	0.008546	0.006820	P17	4	4200	1.25	0.098	yjfN	b4188	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
165	325	-1.00	0.000	146	47	245	96	0.000569	0.001856	B19	4	4201	-1.00	0.000	yjfO	b4189	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
497	453	1.00	0.000	249	15	475	132	0.000780	0.003601	D19	4	4202	-1.20	-0.079	yjfP	b4190	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2804	2518	1.11	0.047	2063	2024	2661	2044	0.012059	0.020165	G3	4	300	-1.67	-0.223	yjfQ	b4191	putative DEOR-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
1228	1166	1.05	0.023	597	598	1197	598	0.003526	0.009069	F19	4	4203	-2.57	-0.410	yjfR	b4192	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
751	591	1.27	0.104	550	613	671	581	0.003430	0.005086	H19	4	4204	-1.48	-0.171	sgaT	b4193	"orf, hypothetical protein"	Putative transport proteins	orf; Unknown
432	400	1.00	0.000	397	326	416	361	0.002130	0.003153	J19	4	4205	-1.05	-0.022	sgaB	b4194	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1137	1081	1.05	0.022	1610	1696	1109	1653	0.009753	0.008401	F23	3	1051	1.16	0.065	ptxA	b4195	putative PTS system enzyme II A component	Putative transport proteins	putative transport; Not classified
992	869	1.14	0.057	787	847	931	817	0.004819	0.007053	L19	4	4206	-1.46	-0.165	sgaH	b4196	probable hexulose-6-phosphate synthase	Putative enzymes	"putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
8045	7640	1.05	0.022	11123	9681	7842	10402	0.061379	0.059427	N19	4	4207	1.03	0.014	sgaU	b4197	putative hexulose-6-phosphate isomerase	Putative enzymes	"putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
54	507	-1.01	-0.006	200	518	281	359	0.002119	0.002128	C7	2	122	-1.00	0.000	sgaE	b4198	putative epimerase/aldolase	Putative enzymes	putative enzyme; Not classified
1467	1498	-1.02	-0.009	2169	2119	1483	2144	0.012651	0.011237	P19	4	4208	1.13	0.051	yjfY	b4199	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
12407	10813	1.15	0.060	22973	25293	11610	24133	0.142400	0.087978	K3	4	1838	1.62	0.209	rpsF	b4200	30S ribosomal subunit protein S6	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
5684	3756	1.51	0.180	7676	6649	4720	7163	0.042265	0.035764	I17	1	1605	1.18	0.073	priB	b4201	primosomal replication protein N	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
1449	1041	1.39	0.144	1370	1429	1245	1399	0.008258	0.009436	M3	4	1839	-1.14	-0.058	rpsR	b4202	30S ribosomal subunit protein S18	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
813	878	-1.08	-0.033	3775	3528	845	3651	0.021546	0.006404	O3	4	1840	3.36	0.527	rplI	b4203	50S ribosomal subunit protein L9	"Translation, post-translational modification"	"structural component; Ribosomal proteins - synthesis, modification"
152	290	-1.00	0.000	116	202	221	159	0.000938	0.001674	B21	4	4209	-1.00	0.000	yjfZ	b4204	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3559	2985	1.19	0.076	1215	1380	3272	1297	0.007654	0.024797	D21	4	4210	-3.24	-0.511	ytfA	b4205	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1136	1147	-1.01	-0.004	1032	1025	1141	1029	0.006071	0.008649	F21	4	4211	-1.42	-0.154	ytfB	b4206	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2649	2672	-1.01	-0.004	5267	4050	2661	4659	0.027489	0.020162	A5	4	1841	1.36	0.135	fklB	b4207	FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase)	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
2696	2688	1.00	0.001	3185	4068	2692	3627	0.021400	0.020400	J9	2	901	1.05	0.021	cycA	b4208	"transport of D-alanine, D-serine, and glycine"	Transport and binding proteins	"transport; Transport of small molecules: Amino acids, amines"
1506	1788	-1.19	-0.075	1305	1626	1647	1465	0.008647	0.012481	H21	4	4212	-1.44	-0.159	ytfE	b4209	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
239	215	1.00	0.000	153	341	227	247	0.001457	0.001720	J21	4	4213	-1.00	0.000	ytfF	b4210	putative transmembrane subunit	putative membrane protein	putative membrane; Not classified
4242	3785	1.12	0.049	3415	2921	4013	3168	0.018694	0.030413	L21	4	4214	-1.63	-0.211	ytfG	b4211	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
14444	14153	1.02	0.009	20461	20235	14298	20348	0.120066	0.108350	N21	4	4215	1.11	0.045	ytfH	b4212	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
729	706	1.03	0.014	977	1238	718	1108	0.006537	0.005438	M4	2	2031	1.20	0.080	cpdB	b4213	2':3'-cyclic-nucleotide 2'-phosphodiesterase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
2145	1446	1.48	0.171	1809	1832	1796	1820	0.010742	0.013607	O16	4	2272	-1.27	-0.103	cysQ	b4214	affects pool of 3'-phosphoadenosine-5'-phosphosulfate in pathway of sulfite synthesis	Central intermediary metabolism	phenotype; Central intermediary metabolism: Sulfur metabolism
1313	1243	1.06	0.024	1928	1839	1278	1884	0.011115	0.009684	P21	4	4216	1.15	0.060	ytfI	b4215	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1086	1114	-1.03	-0.011	363	266	1100	315	0.001856	0.008335	B23	4	4217	-2.78	-0.444	ytfJ	b4216	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
218	318	-1.00	0.000	859	1303	268	1081	0.006377	0.002034	D23	4	4218	2.13	0.327	ytfK	b4217	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5759	6456	-1.12	-0.050	6810	6749	6107	6779	0.040003	0.046281	B7	4	2617	-1.16	-0.063	ytfL	b4218	putative transport protein	Putative transport proteins	putative transport; Not classified
1100	836	1.31	0.119	1566	1715	968	1640	0.009678	0.007336	C5	4	1842	1.32	0.120	msrA	b4219	peptide methionine sulfoxide reductase	"Translation, post-translational modification"	enzyme; Proteins - translation and modification
1683	1598	1.05	0.022	1405	1423	1641	1414	0.008342	0.012432	F23	4	4219	-1.49	-0.173	ytfM	b4220	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
739	599	1.23	0.091	295	270	669	282	0.001664	0.005070	H23	4	4220	-1.69	-0.228	ytfN	b4221	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
926	1001	-1.08	-0.034	1058	1155	964	1107	0.006531	0.007301	J23	4	4221	-1.12	-0.048	ytfP	b4222	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1706	2155	-1.26	-0.101	1239	1885	1930	1562	0.009216	0.014627	L23	4	4222	-1.59	-0.201	yjfA	b4223	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6489	6551	-1.01	-0.004	9338	9237	6520	9288	0.054804	0.049410	L15	4	2654	1.11	0.045	chpS	b4224	"suppressor of inhibitory function of ChpB, PemI-like, autoregulated"	Cell processes	phenotype; Not classified
2578	3101	-1.20	-0.080	3107	3242	2840	3175	0.018735	0.021519	N15	4	2655	-1.15	-0.060	chpB	b4225	"probable growth inhibitor, PemK-like, autoregulated"	Putative factors	putative factor; Not classified
5582	4809	1.16	0.065	4542	3784	5196	4163	0.024563	0.039373	A18	4	2273	-1.60	-0.205	ppa	b4226	inorganic pyrophosphatase	Central intermediary metabolism	"enzyme; Central intermediary metabolism: Pool, multipurpose conversions"
716	586	1.22	0.087	1150	1013	651	1082	0.006382	0.004934	H23	3	1052	1.29	0.112	ytfQ	b4227	putative LACI-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
2345	2004	1.17	0.068	2619	2202	2174	2411	0.014224	0.016478	J23	3	1053	-1.16	-0.064	ytfR	b4228	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
330	229	1.00	0.000	497	242	279	370	0.002180	0.002116	L23	3	1054	1.00	0.000	ytfS	b4229	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
1661	1456	1.14	0.057	961	1226	1559	1093	0.006451	0.011810	N23	3	1055	-1.83	-0.263	ytfT	b4230	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
1869	2058	-1.10	-0.042	1326	1685	1964	1506	0.008885	0.014879	P23	3	1056	-1.67	-0.224	yjfF	b4231	putative transport system permease protein	Putative transport proteins	putative transport; Not classified
4861	4875	-1.00	-0.001	5688	5090	4868	5389	0.031799	0.036890	C18	4	2274	-1.16	-0.064	fbp	b4232	fructose-bisphosphatase	Central intermediary metabolism	enzyme; Central intermediary metabolism: Gluconeogenesis
1439	1565	-1.09	-0.037	1233	1291	1502	1262	0.007444	0.011383	K22	2	566	-1.53	-0.184	yjfG	b4233	putative ligase	Putative enzymes	putative enzyme; Not classified
2016	1533	1.31	0.119	2195	1996	1774	2095	0.012364	0.013446	I14	3	629	-1.09	-0.036	yjgA	b4234	putative alpha helix protein	"Hypothetical, unclassified, unknown"	phenotype; Not classified
3292	3412	-1.04	-0.016	5854	4773	3352	5314	0.031356	0.025402	E5	4	1843	1.23	0.091	pmbA	b4235	"maturation of antibiotic MccB17, see tld genes"	"Hypothetical, unclassified, unknown"	phenotype; Proteins - translation and modification
138	324	-1.00	0.000	998	812	231	905	0.005340	0.001750	B16	4	1497	1.78	0.250	cybC	b4236	cytochrome b(562)	Energy metabolism	"enzyme; Energy metabolism, carbon: Electron transport"
2734	2466	1.11	0.045	2245	2620	2600	2432	0.014353	0.019703	E18	4	2275	-1.37	-0.138	nrdG	b4237	anaerobic ribonucleotide reductase activating protein	Nucleotide biosynthesis and metabolism	enzyme; Central intermediary metabolism: Nucleotide interconversions
6379	6604	-1.04	-0.015	8490	7608	6491	8049	0.047493	0.049191	O4	2	2032	-1.04	-0.015	nrdD	b4238	anaerobic ribonucleoside-triphosphate reductase	Nucleotide biosynthesis and metabolism	enzyme; 2'-Deoxyribonucleotide metabolism
215	564	-1.13	-0.053	172	919	390	545	0.003219	0.002952	E7	2	123	1.07	0.031	treC	b4239	trehalase 6-P hydrolase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
680	733	-1.08	-0.033	1345	1390	706	1368	0.008069	0.005353	L9	2	902	1.51	0.178	treB	b4240	"PTS system enzyme II, trehalose specific"	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
3366	3329	1.01	0.005	3015	3039	3347	3027	0.017861	0.025366	D24	1	1242	-1.42	-0.152	treR	b4241	"repressor of treA,B,C"	Regulatory function	regulator; Osmotic adaptation
101	38	1.00	0.000	62	76	69	69	0.000405	0.000524	N9	2	903	-1.00	0.000	mgtA	b4242	"Mg2+ transport ATPase, P-type 1"	Transport and binding proteins	enzyme; Transport of small molecules: Cations
5464	4623	1.18	0.073	3768	2649	5043	3208	0.018932	0.038218	N23	4	4223	-2.02	-0.305	yjgF	b4243	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3413	3444	-1.01	-0.004	2493	1828	3429	2161	0.012750	0.025982	A6	2	2033	-2.04	-0.309	pyrI	b4244	"aspartate carbamoyltransferase, regulatory subunit"	Nucleotide biosynthesis and metabolism	enzyme; Pyrimidine ribonucleotide biosynthesis
8200	6810	1.20	0.081	5713	4519	7505	5116	0.030189	0.056871	C6	2	2034	-1.88	-0.275	pyrB	b4245	"aspartate carbamoyltransferase, catalytic subunit"	Nucleotide biosynthesis and metabolism	enzyme; Pyrimidine ribonucleotide biosynthesis
389	545	-1.09	-0.038	1172	1227	467	1200	0.007079	0.003539	E6	2	2035	2.00	0.301	pyrL	b4246	pyrBI operon leader peptide	Nucleotide biosynthesis and metabolism	leader; Pyrimidine ribonucleotide biosynthesis
2582	2575	1.00	0.001	2363	1564	2578	1964	0.011587	0.019538	P23	4	4224	-1.69	-0.227	yjgG	b4247	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6424	6536	-1.02	-0.007	8629	8448	6480	8539	0.050384	0.049105	B2	1	4225	1.03	0.011	yjgH	b4248	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
327	665	-1.33	-0.124	317	675	496	496	0.002928	0.003759	M18	2	2087	-1.25	-0.098	yjgI	b4249	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
1287	1383	-1.08	-0.031	1799	1650	1335	1725	0.010177	0.010118	D2	1	4226	1.01	0.003	b4250	b4250	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5163	4010	1.29	0.110	6738	6794	4586	6766	0.039926	0.034755	F2	1	4227	1.15	0.060	yjgJ	b4251	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3487	3483	1.00	0.001	5968	5851	3485	5910	0.034871	0.026410	H2	1	4228	1.32	0.121	yjgK	b4252	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1813	1484	1.22	0.087	2391	2474	1648	2432	0.014353	0.012492	J2	1	4229	1.15	0.060	yjgL	b4253	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1320	1097	1.20	0.081	1012	805	1208	909	0.005361	0.009158	E16	1	1979	-1.71	-0.233	argI	b4254	ornithine carbamoyltransferase 1	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Arginine
3716	3959	-1.07	-0.028	6463	5025	3837	5744	0.033894	0.029079	L2	1	4230	1.17	0.067	yjgD	b4255	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5995	5894	1.02	0.007	4362	4160	5945	4261	0.025142	0.045048	N2	1	4231	-1.79	-0.253	b4256	b4256	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
668	711	-1.06	-0.027	1250	694	689	972	0.005734	0.005222	P2	1	4232	1.10	0.041	yjgN	b4257	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
5887	6607	-1.12	-0.050	6150	5325	6247	5738	0.033857	0.047337	G5	4	1844	-1.40	-0.146	valS	b4258	valine tRNA synthetase	"Translation, post-translational modification"	"enzyme; Aminoacyl tRNA synthetases, tRNA modification"
1506	1263	1.19	0.076	2727	2314	1385	2520	0.014872	0.010492	K17	1	1606	1.42	0.152	holC	b4259	"DNA polymerase III, chi subunit"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
4834	5018	-1.04	-0.016	4169	4647	4926	4408	0.026012	0.037325	I5	4	1845	-1.43	-0.157	pepA	b4260	aminopeptidase A/I	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
2492	2397	1.04	0.017	2327	1980	2445	2153	0.012707	0.018525	B4	1	4233	-1.46	-0.164	yjgP	b4261	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
845	928	-1.10	-0.041	1006	859	887	932	0.005502	0.006719	D4	1	4234	-1.22	-0.087	yjgQ	b4262	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
33345	32337	1.03	0.013	37014	33595	32841	35305	0.208323	0.248861	F4	1	4235	-1.19	-0.077	yjgR	b4263	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
696	704	-1.01	-0.005	326	529	700	427	0.002522	0.005304	I3	4	301	-1.77	-0.248	idnR	b4264	L-idonate operon regulator	Regulatory function	putative regulator; Not classified
1170	1871	-1.60	-0.204	421	583	1520	502	0.002964	0.011521	G7	2	124	-3.84	-0.584	idnT	b4265	L-Idonate transporter	Transport and binding proteins	putative transport; Not classified
4967	5346	-1.08	-0.032	3055	2339	5156	2697	0.015915	0.039074	D7	4	2618	-2.46	-0.390	idnO	b4266	5-ketogluconate:gluconate oxidoreductase	Carbon compound catabolism	putative enzyme; Not classified
10355	9585	1.08	0.034	2459	1817	9970	2138	0.012617	0.075550	F7	4	2619	-5.99	-0.777	idnD	b4267	L-idonate dehydrogenase	Carbon compound catabolism	putative enzyme; Not classified
1025	947	1.08	0.035	101	161	986	131	0.000773	0.007473	I7	2	125	-2.49	-0.396	idnK	b4268	gluconate kinase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
5956	5383	1.11	0.044	4180	5134	5670	4657	0.027480	0.042964	H7	4	2620	-1.56	-0.194	yjgB	b4269	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
308	314	-1.00	0.000	1148	665	311	907	0.005350	0.002359	I2	1	389	1.78	0.251	intB	b4271	prophage P4 integrase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Phage-related functions and prophages"
18000	14916	1.21	0.082	29211	30432	16458	29821	0.175966	0.124717	H4	1	4236	1.41	0.150	yi21_6	b4272	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
2285	2166	1.06	0.023	2182	2344	2225	2263	0.013354	0.016864	K2	1	390	-1.26	-0.101	yi22_6	b4273	IS2 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
4107	3818	1.08	0.032	6339	6674	3963	6507	0.038394	0.030029	J4	1	4237	1.28	0.107	yjgW	b4274	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1942	1651	1.18	0.070	2824	2470	1796	2647	0.015619	0.013613	L4	1	4238	1.15	0.060	yjgX	b4275	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
586	691	-1.18	-0.071	851	845	639	848	0.005002	0.004841	N4	1	4239	1.03	0.014	yjgY	b4276	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
159	38	1.00	0.000	248	147	98	197	0.001164	0.000746	P4	1	4240	1.00	0.000	yjgZ	b4277	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
503	569	-1.13	-0.054	567	371	536	469	0.002767	0.004059	B6	1	4241	-1.35	-0.131	yi41	b4278	IS4 hypothetical protein	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
129	162	-1.00	0.000	158	172	146	165	0.000975	0.001103	D6	1	4242	-1.00	0.000	yjhB	b4279	putative transport protein	Putative transport proteins	putative transport; Not classified
3380	3342	1.01	0.005	2866	3945	3361	3405	0.020094	0.025470	J7	4	2621	-1.27	-0.103	yjhC	b4280	putative dehydrogenase	"Hypothetical, unclassified, unknown"	orf; Not classified
3072	2451	1.25	0.098	5756	5400	2761	5578	0.032914	0.020924	F6	1	4243	1.57	0.197	yjhD	b4281	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1733	1527	1.14	0.055	2442	2609	1630	2525	0.014902	0.012352	H6	1	4244	1.21	0.082	yjhE	b4282	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
229	158	1.00	0.000	267	234	194	251	0.001478	0.001468	J6	1	4245	1.00	0.000	yi91b	b4283	IS911 hypothetical protein (IS911B)	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
2994	3181	-1.06	-0.026	6652	5901	3087	6277	0.037038	0.023394	M2	1	391	1.58	0.200	tra8_3	b4284	IS30 transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
2257	1601	1.41	0.149	3398	2708	1929	3053	0.018014	0.014617	O2	1	392	1.23	0.091	b4285	b4285	putative transposase	"Phage, transposon, or plasmid"	"IS, phage, Tn; Not classified"
169	156	1.00	0.000	85	44	162	65	0.000383	0.001230	L6	1	4246	-1.00	0.000	b4286	b4286	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
610	736	-1.21	-0.081	410	701	673	556	0.003278	0.005098	P9	2	904	-1.56	-0.192	fecE	b4287	ATP-binding component of citrate-dependent iron(III) transport protein	Transport and binding proteins	transport; Transport of small molecules: Cations
600	1016	-1.69	-0.228	1155	1681	808	1418	0.008366	0.006123	B11	2	905	1.37	0.136	fecD	b4288	"citrate-dependent iron transport, membrane-bound protein"	Transport and binding proteins	transport; Transport of small molecules: Cations
3101	2794	1.11	0.045	4831	4412	2947	4621	0.027269	0.022334	D11	2	906	1.22	0.087	fecC	b4289	"citrate-dependent iron(III) transport protein, cytosolic"	Transport and binding proteins	transport; Transport of small molecules: Cations
192	430	-1.00	0.000	348	360	311	354	0.002092	0.002356	F11	2	907	-1.00	0.000	fecB	b4290	"citrate-dependent iron transport, periplasmic protein"	Transport and binding proteins	transport; Transport of small molecules: Cations
1558	1814	-1.16	-0.066	2480	2836	1686	2658	0.015683	0.012774	H11	2	908	1.23	0.089	fecA	b4291	"outer membrane receptor; citrate-dependent iron transport, outer membrane receptor"	Transport and binding proteins	membrane; Transport of small molecules: Cations
220	422	-1.00	0.000	329	705	321	517	0.003051	0.002434	J11	2	909	1.02	0.007	fecR	b4292	"regulator for fec operon, periplasmic"	Regulatory function	regulator; Transport of small molecules: Cations
216	380	-1.00	0.000	601	744	298	672	0.003968	0.002259	L11	2	910	1.32	0.121	fecI	b4293	probable RNA polymerase sigma factor	Regulatory function	regulator; Global regulatory functions
12922	12101	1.07	0.029	26095	23672	12511	24884	0.146831	0.094809	A4	1	393	1.55	0.190	insA_7	b4294	IS1 protein InsA	"Phage, transposon, or plasmid"	"IS, phage, Tn; Transposon-related functions"
742	632	1.17	0.070	1071	1247	687	1159	0.006839	0.005206	N6	1	4247	1.31	0.118	yjhU	b4295	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
363	446	-1.00	0.000	240	443	404	342	0.002016	0.003063	K7	2	126	-1.02	-0.009	yjhF	b4296	putative transport system permease	Putative transport proteins	putative transport; Not classified
5850	6714	-1.15	-0.060	7059	6977	6282	7018	0.041413	0.047603	L7	4	2622	-1.15	-0.061	yjhG	b4297	putative dehydratase	Putative enzymes	putative enzyme; Not classified
953	952	1.00	0.000	942	882	953	912	0.005380	0.007221	P6	1	4248	-1.34	-0.128	yjhH	b4298	putative lyase/synthase	Putative enzymes	putative enzyme; Not classified
150	200	-1.00	0.000	107	226	175	166	0.000981	0.001328	K3	4	302	-1.00	0.000	yjhI	b4299	putative regulator	Putative regulatory proteins	putative regulator; Not classified
129	117	1.00	0.000	69	87	123	78	0.000460	0.000934	M3	4	303	-1.00	0.000	sgcR	b4300	putative DEOR-type transcriptional regulator	Putative regulatory proteins	putative regulator; Not classified
205	90	1.00	0.000	235	173	147	204	0.001205	0.001115	B8	1	4249	1.00	0.000	sgcE	b4301	putative epimerase	Putative enzymes	putative enzyme; Not classified
172	164	1.00	0.000	167	243	168	205	0.001209	0.001271	D8	1	4250	-1.00	0.000	sgcA	b4302	putative PTS system enzyme II A component	Putative transport proteins	putative transport; Not classified
999	892	1.12	0.049	1309	1629	945	1469	0.008667	0.007162	N7	4	2623	1.21	0.083	sgcQ	b4303	putative nucleoside triphosphatase	Putative enzymes	putative enzyme; Not classified
-27	75	-1.00	0.000	144	184	24	164	0.000968	0.000182	N11	2	911	1.00	0.000	sgcC	b4304	putative PTS system enzyme IIC component	Putative transport proteins	putative transport; Not classified
214	190	1.00	0.000	321	265	202	293	0.001729	0.001533	F8	1	4251	1.00	0.000	sgcX	b4305	putative lyase/synthase	Putative enzymes	putative enzyme; Not classified
836	884	-1.06	-0.024	1198	1186	860	1192	0.007034	0.006515	P7	4	2624	1.08	0.033	yjhP	b4306	putative methyltransferase	Putative enzymes	putative enzyme; Not classified
1608	1533	1.05	0.021	1776	2044	1570	1910	0.011271	0.011900	H8	1	4252	-1.06	-0.024	yjhQ	b4307	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
520	446	1.04	0.017	487	407	483	447	0.002638	0.003660	B9	4	2625	-1.22	-0.086	yjhR	b4308	putative frameshift suppressor	Putative regulatory proteins	phenotype; Not classified
656	514	1.28	0.106	632	445	585	538	0.003176	0.004434	J8	1	4253	-1.40	-0.145	yjhS	b4309	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
320	248	1.00	0.000	267	194	284	231	0.001360	0.002152	L8	1	4254	-1.00	0.000	yjhT	b4310	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
69	78	-1.00	0.000	39	18	73	29	0.000171	0.000556	N8	1	4255	-1.00	0.000	yjhA	b4311	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
514	714	-1.39	-0.143	289	338	614	314	0.001851	0.004655	M22	2	567	-1.55	-0.191	fimB	b4312	recombinase involved in phase variation; regulator for fimA	Regulatory function	regulator; Surface structures
233	308	-1.00	0.000	173	232	270	202	0.001195	0.002049	O22	2	568	-1.00	0.000	fimE	b4313	recombinase involved in phase variation; regulator for fimA	Regulatory function	regulator; Surface structures
2760	2834	-1.03	-0.011	6093	7205	2797	6649	0.039234	0.021197	L2	2	569	1.85	0.267	fimA	b4314	major type 1 subunit fimbrin (pilin)	Cell structure	structural component; Surface structures
1636	1999	-1.22	-0.087	3095	3378	1818	3237	0.019098	0.013773	C24	2	570	1.39	0.142	fimI	b4315	fimbrial protein	Cell structure	structural component; Surface structures
2155	2650	-1.23	-0.090	2342	1920	2403	2131	0.012576	0.018207	E24	2	571	-1.45	-0.161	fimC	b4316	"periplasmic chaperone, required for type 1 fimbriae"	Cell processes	factor; Surface structures
5957	5251	1.13	0.055	6999	6913	5604	6956	0.041046	0.042466	G24	2	572	-1.03	-0.015	fimD	b4317	"outer membrane protein; export and assembly of type 1 fimbriae, interrupted"	Cell structure	membrane; Outer membrane constituents
343	499	-1.00	0.000	339	323	421	331	0.001954	0.003192	I24	2	573	-1.06	-0.027	fimF	b4318	fimbrial morphology	Cell structure	structural component; Surface structures
141	242	-1.00	0.000	92	551	191	321	0.001897	0.001450	K24	2	574	1.00	0.000	fimG	b4319	fimbrial morphology	Cell structure	structural component; Surface structures
259	251	1.00	0.000	131	191	255	161	0.000951	0.001931	M24	2	575	-1.00	0.000	fimH	b4320	"minor fimbrial subunit, D-mannose specific adhesin"	Cell structure	structural component; Surface structures
220	297	-1.00	0.000	143	446	259	294	0.001738	0.001961	P11	2	912	-1.00	0.000	gntP	b4321	gluconate transport system permease 3	Transport and binding proteins	"transport; Transport of small molecules: Carbohydrates, organic acids, alcohols"
674	746	-1.11	-0.044	499	661	710	580	0.003424	0.005383	M7	2	127	-1.57	-0.197	uxuA	b4322	mannonate hydrolase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
150	414	-1.00	0.000	1051	1110	282	1080	0.006375	0.002136	O7	2	128	2.12	0.327	uxuB	b4323	D-mannonate oxidoreductase	Carbon compound catabolism	enzyme; Degradation of small molecules: Carbon compounds
523	619	-1.18	-0.073	1680	1502	571	1591	0.009389	0.004329	A9	2	129	2.17	0.336	uxuR	b4324	regulator for uxu operon	Regulatory function	regulator; Degradation of small molecules: Carbon compounds
53	18	1.00	0.000	135	53	35	94	0.000553	0.000268	P8	1	4256	1.00	0.000	yjiC	b4325	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
154	107	1.00	0.000	160	31	130	95	0.000563	0.000987	B10	1	4257	-1.00	0.000	yjiD	b4326	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
785	687	1.14	0.058	3195	3932	736	3563	0.021027	0.005575	O3	4	304	3.77	0.577	yjiE	b4327	putative transcriptional regulator LYSR-type	Putative regulatory proteins	putative regulator; Not classified
17190	17166	1.00	0.001	13023	13029	17178	13026	0.076862	0.130173	K5	4	1846	-1.69	-0.229	iadA	b4328	isoaspartyl dipeptidase	Carbon compound catabolism	"enzyme; Degradation of proteins, peptides, glyco"
387	430	-1.00	0.000	360	454	409	407	0.002400	0.003096	D10	1	4258	-1.03	-0.014	yjiG	b4329	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1952	1816	1.07	0.031	2382	2843	1884	2612	0.015414	0.014278	F10	1	4259	1.08	0.033	yjiH	b4330	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3139	3132	1.00	0.001	4406	4634	3136	4520	0.026671	0.023761	H10	1	4260	1.12	0.050	yjiI	b4331	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
407	379	1.00	0.000	605	513	393	559	0.003298	0.002975	J10	1	4261	1.10	0.041	yjiJ	b4332	putative transport protein	Putative transport proteins	putative transport; Not classified
358	272	1.00	0.000	283	136	315	210	0.001238	0.002386	L10	1	4262	-1.00	0.000	yjiK	b4333	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1088	1348	-1.24	-0.093	2528	2576	1218	2552	0.015061	0.009231	D9	4	2626	1.63	0.213	yjiL	b4334	putative enzyme	Putative enzymes	putative enzyme; Not classified
896	1011	-1.13	-0.052	900	1220	954	1060	0.006254	0.007227	N10	1	4263	-1.16	-0.063	yjiM	b4335	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2338	2369	-1.01	-0.006	1521	1226	2353	1374	0.008105	0.017832	P10	1	4264	-2.20	-0.342	yjiN	b4336	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
6544	6102	1.07	0.030	10356	9938	6323	10147	0.059877	0.047911	B1	4	1057	1.25	0.097	yjiO	b4337	putative transport protein	Putative transport proteins	putative transport; Not classified
348	299	1.00	0.000	7	98	324	53	0.000311	0.002453	B12	1	4265	-1.00	0.000	yjiP	b4338	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
541	758	-1.40	-0.146	486	555	650	520	0.003071	0.004925	D12	1	4266	-1.60	-0.205	yjiQ	b4339	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
394	398	-1.00	0.000	499	566	396	532	0.003141	0.003001	A5	4	305	1.05	0.020	yjiR	b4340	putative regulator	Putative regulatory proteins	putative regulator; Not classified
15734	13851	1.14	0.055	25340	21402	14792	23371	0.137907	0.112093	F12	1	4267	1.23	0.090	yjiS	b4341	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
8339	8084	1.03	0.014	15750	13263	8211	14507	0.085600	0.062224	H12	1	4268	1.38	0.139	yjiT	b4342	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
716	709	1.01	0.004	827	943	712	885	0.005222	0.005398	J12	1	4269	-1.03	-0.014	yjiU	b4343	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1068	1213	-1.14	-0.056	1275	2095	1141	1685	0.009942	0.008644	A9	2	1665	1.15	0.061	mcrD	b4344	inhibits McrE 5-methylcytosine restriction system	Regulatory function	regulator; Degradation of DNA
597	852	-1.43	-0.155	758	392	724	575	0.003393	0.005488	C9	2	1666	-1.62	-0.209	mcrC	b4345	"component of McrBC 5-methylcytosine restriction system, expands range of sequences restricted"	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
330	477	-1.00	0.000	1294	62	404	678	0.004001	0.003058	E9	2	1667	1.31	0.117	mcrB	b4346	component of McrBC 5-methylcytosine restriction system	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
3162	3299	-1.04	-0.018	4412	4988	3230	4700	0.027732	0.024480	L12	1	4270	1.13	0.054	yjiW	b4347	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
750	579	1.30	0.112	603	637	664	620	0.003657	0.005033	M17	1	1607	-1.38	-0.139	hsdS	b4348	specificity determinant for hsdM and hsdR	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
7954	8763	-1.10	-0.042	21050	22259	8358	21655	0.127778	0.063337	O17	1	1608	2.02	0.305	hsdM	b4349	host modification; DNA methylase M	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1487	1626	-1.09	-0.039	2880	2702	1556	2791	0.016468	0.011795	G9	2	1668	1.40	0.145	hsdR	b4350	host restriction; endonuclease R	"DNA replication, repair, restriction/modification"	enzyme; Degradation of DNA
2149	1609	1.34	0.126	2318	2381	1879	2350	0.013866	0.014241	A19	1	1609	-1.03	-0.012	mrr	b4351	restriction of methylated adenine	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
1544	1730	-1.12	-0.049	1147	1020	1637	1084	0.006395	0.012405	N12	1	4271	-1.94	-0.288	yjiA	b4352	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
857	926	-1.08	-0.034	1185	1126	891	1156	0.006819	0.006754	P12	1	4272	1.01	0.004	yjiX	b4353	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
4043	4122	-1.02	-0.008	2182	2280	4082	2231	0.013166	0.030934	F24	1	1243	-2.35	-0.371	yjiY	b4354	putative carbon starvation protein	"Hypothetical, unclassified, unknown"	orf; Not classified
3167	3253	-1.03	-0.012	2526	2382	3210	2454	0.014480	0.024324	H24	1	1244	-1.68	-0.225	tsr	b4355	"methyl-accepting chemotaxis protein I, serine sensor receptor"	Regulatory function	regulator; Chemotaxis and mobility
359	314	1.00	0.000	533	572	337	552	0.003259	0.002551	D1	4	1058	1.09	0.036	yjiZ	b4356	"putative transport protein, cryptic, orf, joins former yjiZ and yjjL"	Putative transport proteins	putative transport; Not classified
19	238	-1.00	0.000	147	192	128	170	0.001002	0.000972	B14	1	4273	1.00	0.000	yjjM	b4357	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
2823	3107	-1.10	-0.042	2949	2763	2965	2856	0.016852	0.022466	F9	4	2627	-1.33	-0.125	yjjN	b4358	putative oxidoreductase	Putative enzymes	putative enzyme; Not classified
6278	4799	1.31	0.117	7464	7327	5538	7395	0.043638	0.041966	J24	1	1245	1.04	0.017	mdoB	b4359	phosphoglycerol transferase I	Cell processes	enzyme; Osmotic adaptation
572	338	1.14	0.059	811	715	455	763	0.004504	0.003448	K14	3	630	1.31	0.116	yjjA	b4360	putative glycoprotein/receptor	Putative factors	putative factor; Not classified
3776	3918	-1.04	-0.016	2436	2867	3847	2652	0.015646	0.029151	C19	1	1610	-1.86	-0.270	dnaC	b4361	chromosome replication; initiation and chain elongation	"DNA replication, repair, restriction/modification"	"putative enzyme; DNA - replication, repair, restriction/modification"
1763	1672	1.05	0.023	1355	1265	1717	1310	0.007730	0.013014	E19	1	1611	-1.68	-0.226	dnaT	b4362	DNA biosynthesis; primosomal protein i	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
126	71	1.00	0.000	79	67	99	73	0.000432	0.000747	D14	1	4274	-1.00	0.000	yjjB	b4363	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1750	1578	1.11	0.045	1930	1953	1664	1942	0.011458	0.012608	M14	3	631	-1.10	-0.042	yjjP	b4364	putative structural protein	Putative cell structure	putative structure; Not classified
62	39	1.00	0.000	294	36	51	165	0.000973	0.000385	C5	4	306	1.00	0.000	yjjQ	b4365	putative regulator	Putative regulatory proteins	putative regulator; Not classified
522	314	1.04	0.018	419	376	418	397	0.002344	0.003167	E5	4	307	-1.06	-0.024	bglJ	b4366	2-component transcriptional regulator	Regulatory function	regulator; Not classified
2614	2720	-1.04	-0.017	2059	2396	2667	2227	0.013143	0.020209	F14	1	4275	-1.54	-0.187	fhuF	b4367	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
3576	3995	-1.12	-0.048	4753	4453	3785	4603	0.027161	0.028685	H9	4	2628	-1.06	-0.024	yjjT	b4371	putative enzyme	Putative enzymes	putative enzyme; Not classified
694	1079	-1.56	-0.192	1035	951	887	993	0.005858	0.006720	G19	1	1612	-1.15	-0.060	holD	b4372	"DNA polymerase III, psi subunit"	"DNA replication, repair, restriction/modification"	"enzyme; DNA - replication, repair, restriction/modification"
797	842	-1.06	-0.024	992	879	820	935	0.005520	0.006211	M5	4	1847	-1.13	-0.051	rimI	b4373	acyltransferase for 30S ribosomal subunit protein S18; acetylation of N-terminal alanine	"Translation, post-translational modification"	enzyme; Ribosomes - maturation and modification
2135	2158	-1.01	-0.005	1985	2460	2147	2223	0.013115	0.016268	J9	4	2629	-1.24	-0.094	yjjG	b4374	putative phosphatase	Putative enzymes	putative enzyme; Not classified
9856	8274	1.19	0.076	6656	7618	9065	7137	0.042113	0.068695	O5	4	1848	-1.63	-0.213	prfC	b4375	peptide chain release factor RF-3	"Translation, post-translational modification"	factor; Proteins - translation and modification
1760	1798	-1.02	-0.009	4044	3547	1779	3795	0.022396	0.013482	L24	1	1246	1.66	0.220	osmY	b4376	hyperosmotically inducible periplasmic protein	Cell processes	phenotype; Osmotic adaptation
547	542	1.01	0.004	806	853	545	829	0.004894	0.004127	H14	1	4276	1.19	0.074	yjjU	b4377	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
379	363	1.00	0.000	495	413	371	454	0.002679	0.002812	J14	1	4277	-1.00	0.000	yjjV	b4378	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
219	277	-1.00	0.000	542	579	248	560	0.003307	0.001879	D16	4	1498	1.10	0.042	yjjW	b4379	putative activating enzyme	Putative enzymes	putative enzyme; Not classified
212	147	1.00	0.000	279	424	179	351	0.002074	0.001358	L14	1	4278	1.00	0.000	yjjI	b4380	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
479	767	-1.53	-0.186	767	1048	623	908	0.005356	0.004720	G6	2	2036	1.13	0.055	deoC	b4381	2-deoxyribose-5-phosphate aldolase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
294	564	-1.13	-0.052	845	1576	429	1211	0.007143	0.003250	I6	2	2037	2.20	0.342	deoA	b4382	thymidine phosphorylase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
512	420	1.02	0.011	771	1052	466	912	0.005380	0.003534	K6	2	2038	1.52	0.182	deoB	b4383	phosphopentomutase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
1773	1380	1.28	0.109	1837	2099	1577	1968	0.011613	0.011948	M6	2	2039	-1.03	-0.012	deoD	b4384	purine-nucleoside phosphorylase	Nucleotide biosynthesis and metabolism	enzyme; Salvage of nucleosides and nucleotides
720	794	-1.10	-0.043	411	746	757	579	0.003416	0.005737	N14	1	4279	-1.68	-0.225	yjjJ	b4385	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
23259	27273	-1.17	-0.069	41217	38303	25266	39760	0.234611	0.191458	A7	4	1849	1.23	0.088	lplA	b4386	lipoate-protein ligase A	Cell structure	"enzyme; Macromolecule synthesis, modification: Lipoprotein"
7176	6762	1.06	0.026	5781	4181	6969	4981	0.029390	0.052809	P14	1	4280	-1.80	-0.255	smp	b4387	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1930	2011	-1.04	-0.018	4363	3949	1970	4156	0.024525	0.014930	G16	1	1980	1.64	0.216	serB	b4388	3-phosphoserine phosphatase	Amino acid biosynthesis	enzyme; Amino acid biosynthesis: Serine
1607	1840	-1.15	-0.059	1935	1833	1724	1884	0.011115	0.013061	C7	4	1850	-1.18	-0.070	sms	b4389	probable ATP-dependent protease	Putative enzymes	"putative enzyme; Degradation of proteins, peptides, glyco"
26472	24526	1.08	0.033	21576	21681	25499	21629	0.127624	0.193224	D19	1	2378	-1.51	-0.180	nadR	b4390	probable nadAB transcriptional regulator	Regulatory function	"putative regulator; Biosynthesis of cofactors, carriers: Pyridine nucleotide"
1457	1173	1.24	0.094	2537	2020	1315	2279	0.013446	0.009964	B16	1	4281	1.35	0.130	yjjK	b4391	putative ATP-binding component of a transport system	Putative transport proteins	putative transport; Not classified
3954	3924	1.01	0.003	5388	5983	3939	5685	0.033548	0.029847	O24	2	576	1.12	0.051	slt	b4392	soluble lytic murein transglycosylase	Cell structure	"enzyme; Murein sacculus, peptidoglycan"
841	635	1.33	0.122	1316	1322	738	1319	0.007783	0.005594	I16	1	1981	1.39	0.143	trpR	b4393	regulator for trp operon and aroH; trp aporepressor	Regulatory function	regulator; Amino acid biosynthesis: Tryptophan
1644	1787	-1.09	-0.036	1149	988	1715	1068	0.006305	0.012999	D16	1	4282	-2.06	-0.314	yjjX	b4394	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
1538	1267	1.21	0.084	683	857	1403	770	0.004544	0.010631	F16	1	4283	-2.34	-0.369	gpmB	b4395	phosphoglyceromutase 2	Central intermediary metabolism	"enzyme; Energy metabolism, carbon: Glycolysis"
2737	2316	1.18	0.073	2034	2204	2527	2119	0.012503	0.019146	I19	1	1613	-1.53	-0.185	rob	b4396	right origin-binding protein	"DNA replication, repair, restriction/modification"	"factor; DNA - replication, repair, restriction/modification"
194	235	-1.00	0.000	304	352	214	328	0.001937	0.001625	H16	1	4284	1.00	0.000	creA	b4397	"orf, hypothetical protein"	Putative regulatory proteins	orf; Unknown
31	62	-1.00	0.000	104	209	47	156	0.000922	0.000353	G19	2	172	1.00	0.000	creB	b4398	catabolic regulation response regulator	Regulatory function	regulator; Global regulatory functions
-774	569	-1.14	-0.056	350	735	-102	542	0.003200	-0.000775	I19	2	173	1.07	0.028	creC	b4399	catabolite repression sensor kinase for PhoB; alternative sensor for pho regulon	Regulatory function	enzyme; Global regulatory functions
388	428	-1.00	0.000	886	931	408	908	0.005359	0.003093	C4	1	394	1.73	0.239	creD	b4400	tolerance to colicin E2	Putative regulatory proteins	putative membrane; Colicin-related functions
331	883	-1.77	-0.247	824	1592	607	1208	0.007129	0.004600	K19	2	174	1.55	0.190	arcA	b4401	"negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA)"	Regulatory function	regulator; Global regulatory functions
831	831	-1.00	0.000	697	739	831	718	0.004237	0.006298	J16	1	4285	-1.49	-0.172	yjjY	b4402	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
298	281	1.00	0.000	454	211	289	332	0.001962	0.002191	L16	1	4286	-1.00	0.000	lasT	b4403	"orf, hypothetical protein"	"Hypothetical, unclassified, unknown"	orf; Unknown
220	268	-1.00	0.000	225	156	244	191	0.001125	0.001851	B18	1	4289	-1.00	0.000	yifM	b4404	"orf, conceptual translation in SwissProt is fused with b4405"	"Hypothetical, unclassified, unknown"	orf; Unknown
2510	2359	1.06	0.027	3191	3121	2434	3156	0.018623	0.018445	D18	1	4290	1.01	0.004	yifM	b4405	"orf, conceptual translation in SwissProt is fused with b4404"	"Hypothetical, unclassified, unknown"	orf; Unknown
																			
	stdev	1.135	0.075		Tot	13196516	16947139						stdev	0.180					
	median	1.000	0.000										median	0.000					
																			
																			
																			
84039	73912			67025	61145	78975	64085			A1	1	4291							
219283	223305			142130	142194	221294	142162			A24	1	4292							
-33	-33			-246	26	-33	-110			A1	2	4293							
157	651			-673	43	404	-315			A24	2	4294							
74998	82074			63326	65839	78536	64582			A1	3	4295							
200960	186764			128681	118979	193862	123830			A24	3	4296							
169	238			70	88	204	79			A1	4	4297							
284	306			13	219	295	116			A24	4	4298					
263522	230329			182014	183352	246925	182683			P1	1	4299					
102007	103230			29457	33915	102619	31686			P24	1	4300					
-2060	-108			-473	-41	-1084	-257			P1	2	4301					
-375	480			-159	-31	53	-95			P24	2	4302					
293030	293824			209396	175505	293427	192450			P1	3	4303					
93902	97137			30116	29315	95520	29716			P24	3	4304					
258	678			467	357	468	412			P1	4	4305					
32	113			-35	52	73	9			P24	4	4306					
62124	66406			45066	46757	64265	45912			A1	1	4307					
314328	360304			141375	130417	337316	135896			A24	1	4308					
-269	28			-43	-43	-120	-43			A1	2	4309					
-3156	1880			-1452	365	-638	-543			A24	2	4310					
75751	65917			55123	28311	70834	41717			A1	3	4311					
361539	341606			149611	118606	351573	134108			A24	3	4312					
100	81			27	-41	90	-7			A1	4	4313					
2023	1306			450	161	1665	305			A24	4	4314					
93060	98932			61327	62214	95996	61771			P1	1	4315					
77413	85074			33731	41973	81243	37852			P24	1	4316					
59	-52			175	38	4	106			P1	2	4317					
-154	405			-15	163	126	74			P24	2	4318					
84970	69825			55024	49446	77397	52235			P1	3	4319					
86959	85763			43658	42467	86361	43062			P24	3	4320					
165	158			94	78	162	86			P1	4	4321					
60	30			-6	134	45	64			P24	4	4322					
93298	73495			64292	60417	83397	62355			A1	1	4323					
184613	174494			92015	84851	179553	88433			A24	1	4324					
-525	-24			-356	-71	-274	-213			A1	2	4325					
-294	-29			-111	133	-161	11			A24	2	4326					
92642	97911			54963	63812	95276	59388			A1	3	4327					
203708	188271			98243	77435	195989	87839			A24	3	4328					
191	31			-24	31	111	3			A1	4	4329					
242	241			104	33	242	69			A24	4	4330					
333007	331986			245147	229102	332497	237124			P1	1	4331					
107867	103734			62695	63876	105800	63285			P24	1	4332					
-68	429			1198	651	181	924			P1	2	4333					
-899	289			7	238	-305	122			P24	2	4334					
331551	343931			239605	258065	337741	248835			P1	3	4335					
118130	100700			73054	65636	109415	69345			P24	3	4336					
521	550			700	162	535	431			P1	4	4337					
448	127			96	123	288	109			P24	4	4338