NAME	DESCRIPTION	steady_trp	5min+trp	15min+trp	30min+trp	60min+trp	btrophtnaA2 vs.tnaA2	5min+iaa10	15min+iaa10	30min+iaa10	60min+iaa10	5min+iaa15	15min+iaa15	30min+iaa15	60min+iaa15	trpR2 vs. wt	trpR2+trp vs. wt+trp	trpR2tnaA2+trp vs.tnaA2+trp	trpR2trpEA2+trp vs.trpEA2+trp	trpR2+trp vs. trpR2
b2391	"orf, hypothetical protein"	-0.38	0.68	3.51	0.1	-0.285	-0.09	0.14	0.06	0.03		0.32	0.48	0.87	0.52	1.72	2.43	0.4	-1.6	0.08
aroF	"3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible)"	-0.67	-0.91	-0.44	-0.76	-0.845	-0.17	0.86	0.82	0.98	0.72	0.59	0.3	0.26	0.01	1.98	3.29	0.12	-1.56	0.03
tyrA	chorismate mutase-T and prephenate dehydrogenase	-0.92	-0.47	-0.52	-0.71	-0.535	-1.09	0.18	0.14	0.54	0.24	0.04	-0.17	-0.15	-0.25	2.08	3.24	-0.81	-1.15	-0.18
aroL	shikimate kinase II	-0.51	-0.97	-0.13	-0.4	-0.465	-0.43	-0.17	0.01	0.08	-0.09	-0.1	-0.17	-0.25	-0.54	1.16	1.71	0.7	-0.18	0.12
yedV	putative 2-component sensor protein	-0.6	0	-0.66	-0.2	-0.235	0.25	0.52	1.24	1.74	1.18	-0.17	0.4	1.41	1.3	2.03	2.49	1.45	-0.56	0.39
b1372	putative membrane protein	0.07	-0.1	1.15	0.44	-0.065	0.06	0	-0.2	-0.15		0.07	0.31	0.71	0.11	2	2.25	0.53	0.25	0.6
pheA	chorismate mutase-P and prephenate dehydratase	-0.15	-0.15	0.49	-0.13	0.045	0.56	0.39	0.39	-0.09	-0.2	0.51	0.8	0.69	0.72	2.27	2.94	-0.14	0.23	-0.12
b2442	putative prophage integrase	-0.86	0.38	-0.09	0.18	-0.1	0.1	-0.51	-0.23	-0.15	-0.22	-0.23	-0.07	0.16	0.07	3.26	3.48	0.06	0.25	-0.04
b2981	"orf, hypothetical protein"	-0.15	0.08	-0.15	0.02	-0.095	-0.09	0.12	-0.04	0.06	0.08	0.25	0.36	0.43	0.37	2.16	2.91	0.7	0.8	0.04
b1374	putative transposon resolvase	-1.18	-0.22	0.68	0.48	-0.17	0.12	0.45	0.51	0.69	-0.42	0.7	0.74	1.88	1.16	2.11	3.67	1.32	-0.89	0.21
b1545	"orf, hypothetical protein"	-1.03	0	0.42	0.26	-0.125	0.33	0.34	0.43	0.37	-0.64	0.53	0.59	1.9	1.08	1.94	3.41	1.21	-1.09	0.25
ybcX	"orf, hypothetical protein"	-1	0	0.52	0.22	-0.16		0.44	0.38	0.58	-0.58	0.68	1.05	1.98	1.03	2.45	2.72	0.64	-0.27	0.56
ydfM	"orf, hypothetical protein"	-0.76	0.24	0	0.32	-0.115	0.29	0.52	0.34	0.36	-0.43	0.44	0.82	1.35	0.75	2.15	3.2	0.33	-0.25	0.58
ynaC	"orf, hypothetical protein"	-0.71	0	0.46	0.2	0.12	0.12	0.44	0.3	0.37	-0.51	0.57	0.82	1.8	1.09	2.4	3.5	0.82	-0.17	0.28
yabM	putative transport protein	-0.51	-0.28	0.13	-0.05	-0.02	0.86	0.39	0.43	0.58	0.36	0.12	0.26	0.57	0.86	1.65	2.12	0.77	0.28	0.23
lacA	thiogalactoside acetyltransferase	-1.15	0.94	0.49	0.1	0.3	0.49	-0.08	-0.07	-0.07	-0.15	-0.09	0.09	0.07	-0.06	1.48	2.89	0.42	0.08	0.61
nrdF	"ribonucleoside-diphosphate reductase 2, beta chain, frag"	0.06	0	-0.03	-0.4	-0.04	1.32	0.59	0.3	-0.36	1.33	-0.29	-0.27	-0.22	-0.17	2.4	2.16	0.49	0.28	-0.01
malF	"part of maltose permease, periplasmic"	0.32	0.05	-0.04	-0.05	0.06	0.12	0.04	-0.07	-0.22	0.87	0.11	0.24	0.32	0.19	0.95	0.9	1.52	1.45	0.01
trs5_4	IS5 transposase	0.63	-0.24	-0.37	0	-0.14	-0.38	0.08	-0.12	-0.09	0.07	0.49	0.58	0.42	0.38	1.87	1.94	1.8	1.81	0.31
trs5_10	IS5 transposase	0.56	0.06	-0.45	-0.06	-0.145	0.64	0.04	-0.23	-0.14	0	0.43	0.45	0.38	0.42	1.79	2.14	0.93	1.99	0.53
trs5_11	IS5 transposase	0.43	-0.01	-0.33	-0.05	-0.22	0.18	-0.25	-0.56	-0.3	-0.14	0.14	0.14	0.23	0.24	2.02	1.83	1.34	1.6	0.39
trs5_7	IS5 transposase	0.33	-0.3	-0.57	-0.07	-0.165	0.31	-0.25	-0.45	-0.27	-0.17	0.14	0.04	0.14	0.28	1.86	1.82	1.55	1.48	0.19
trs5_1	IS5 transposase	0.5	-0.47	-0.45	-0.21	-0.11	-0.04	-0.1	-0.38	-0.22	0.03	0.24	0.25	0.2	0.34	1.75	1.77	1.61	1.33	0.03
trs5_8	IS5 transposase	0.48	-0.2	-0.49	-0.1	-0.115	0	-0.15	-0.34	-0.27	-0.12	0.28	0.23	0.16	0.3	1.84	1.78	1.54	1.43	0.15
trs5_2	IS5 transposase	0.51	-0.16	-0.43	-0.09	-0.165	0.75	0	-0.03	-0.01	0.03	0.54	0.46	0.52	0.48	2.13	1.98	1.82	2.03	0.29
trs5_6	IS5 transposase	0.69	-0.14	-0.6	-0.03	-0.195	0.7	0	-0.1			0.42	0.48			2.19	2	1.94	2.11	0.38
trs5_3	IS5 transposase	0.49	0.01	-0.42	-0.03	-0.21	0.68	-0.23	-0.3	-0.17	-0.1	0.33	0.41	0.34	0.41	1.97	2.09	1.5	1.94	0.62
trs5_5	IS5 transposase	0.49	-0.29	-0.45	-0.03	-0.17	0.7	-0.09	-0.32	-0.32	-0.07	0.25	0.31	0.33	0.41	1.7	2.01	1.66	1.69	0.44
trs5_9	IS5 transposase	0.44	-0.23	-0.41	-0.07	-0.12	0.5	-0.07	-0.23	-0.12	-0.03	0.3	0.38	0.18	0.39	1.67	1.84	1.62	1.63	0.34
nupC	permease of transport system for 3 nucleosides	-0.03	-0.06	0.25	-0.07	-0.12	0.04	0.23	0.15	0.32	0.38	0.59	0.75	0.75	0.62	1.3	1.41	0.71	2.22	-0.12
xylF	xylose binding protein transport system	-0.54	0.39	0.22	-0.05	0.095	0.26	0.12	-0.1	-0.14	-0.23		0.3	0.47	0.34	1.18	0.83	1.24	1.53	-0.17
dctA	uptake of C4-dicarboxylic acids	0	0.16	-0.35	0.06	0	-0.74	0.32	0.07	0.07	0.75	0.32	0.51	-0.54	-0.77	1	0.98	1.37	2.64	0.11
ampE	regulates ampC	-1.36	-1.91	-1.59	-1.62	-1.38	0.14	0.32	0.7	0.92	0.18	-0.04	0.08	0.3	0.56	1.48	2.93	0.49	-0.23	0.33
aroP	aromatic amino acid transport protein	-0.76	-2.31	-1.39	-1.66	-1.69	0.24	0.63	0.6	0.64	0.43	0.5	-0.07	0.08	0.42	0.23	1.45	0.26	0.18	0.19
fimC	"periplasmic chaperone, required for type 1 fimbriae"	-0.18	-0.16	-0.18	-0.3	-0.025	2.15	-0.04	0.33	0.56	0.41	-0.2	0.41	0.62	0.59	0.36	0.6	2.34	1.71	0.08
fimD	"outer membrane protein; export and assembly of type 1 fimbriae, interrupted"	-0.32	-0.23	0.03	-0.34	0.08	1.97	-0.1	0.8	1.37	1.1	-0.07	0.5	1.36	1.46	0.66	0.79	2.11	1.13	-0.15
gntP	gluconate transport system permease 3	-0.42	-0.13	0.27	-0.15	0.015	1.54	0.15	0.31	0.99	0.21	0.29	0.33	0.8	0.46	1.2	1.63	2.12	0.41	0.44
b1498	putative sulfatase	0.19	-0.24	-0.11	0.14	0.12	0.87	0.72	0.88	0.4	0.65	0.54		1.12	1.08	0.63	0.28	1.44	1.46	-0.2
trpR	regulator for trp operon and aroH; trp aporepressor	-0.34	-0.37	-0.43	-0.61	-0.55	0.45	0.75	0.89	0.76	0.41	0.72	0.68	1.24	0.67	-0.81	-1.6	0.19	1.19	0.04
yjjX	"orf, hypothetical protein"	-0.51	-0.43	-0.82	-0.62	-0.48	0.38	1.16	1.1	1.21	0.77	1.44	1.63	1.73	1.37	-2.94		0.93	0.75	-0.22
evgA	putative positive transcription regulator (sensor EvgS)	0.56	0.28	0.1	0.13	0.135	1.15	0.85	0.9	0.59	0.66	0.87	1.1	0.94	1.32	-0.49	-0.79	0.8	-0.62	-0.1
appY	regulatory protein affecting appA and other genes	0.26	-0.2	0.04	-0.05	-0.075	1	0.21		0.8	0.71	0.43	0.94	1.22	2.36	-0.03	-0.54	0.24	-0.25	-0.32
b1499	putative ARAC-type regulatory protein	-0.17	0.03	0.16	0	0.24	1	0.21	0.48	0.5	0.15	0.58	0.81	1.58	1.68	-0.47	-0.69	1.13	0.33	-0.56
leuB	3-isopropylmalate dehydrogenase	-0.12	-0.17	-0.22	0.24	0.045	1.4	0.63	1.04	0.55	0.91	0.58	0.7	1.18	1.72	-0.43	-0.49	0.79	0.73	-0.1
csgD	putative 2-component transcriptional regulator for 2nd curli operon	0.15	-0.65	-0.05	-0.28	0.23	1.6	1.07	0.41	0.14	0.12		1.5	2.39	2.58	-1.4	-1.94	-0.23	0.52	-0.2
ykfE	"orf, hypothetical protein"	1.29	-0.4	-0.45	-0.38	0.52	0.33	1.58	2.07	1.05	0.43	1.72	2.09	2.63	3.04	-1.94	-2.84	-0.4	-0.01	0.01
ompT	"outer membrane protein 3b (a), protease VII"	0.99	-0.07	-0.18	-0.23	0.1	1.22	1.51	0.87	2.16	2.38	1.66	0.52	0.82	0.86	-0.86	-1.06	0.3	0.62	0.26
ybfM	"orf, hypothetical protein"	-0.79	0.26	0.93	-0.31	0.06	-0.14	0.7	0.69	1.21	0.58	0.96	1.12	1.04	0.93	1.08	1.5	1.32	1.14	0.16
proV	"ATP-binding component of transport system for glycine, betaine and proline"	-0.27	-0.25	-0.55	-0.21	-0.145	1.39	0.95	1.74	0.73	0.39	0.56	1.17	2.04	2.13	1.49	1.23	0.48	-1.32	-0.14
phoE	"outer membrane pore protein E (E,Ic,NmpAB)"	-0.47	0.22	0.28	0.33	0.435	0.74	1.58	1.45	0.4	0.32	2.09	1.33	2.88	2.49	0.79	1.08	0.33	-0.1	0.04
yhcP	"orf, hypothetical protein"	-0.25	0.39	1.35	0.72	0.325	-0.42	1.53	1.38	0.99	0.54	2.29	2.26	2.2	1.95	1.13	1.71	0.28	-0.23	0.19
ybeL	putative alpha helical protein	0.28	-0.19	-0.43	-0.07	-0.26	1.02	0.65	0.56	0.04	-0.14	0.9	1.26	1.01	1.46	0.15	-0.34	-0.38	-0.01	0.04
yafD	"orf, hypothetical protein"	0.62	0.01	-0.11	-0.04	-0.025	1.03	0.86	0.73	0.19	0.01	0.82	1	1.22	1.25	-0.14	-0.12	0.12	0.81	0.4
asnB	asparagine synthetase B	0.58	0.47	-0.61	-0.02	0.11	0.81	0.86	0.65	0.15	0.51	1.32	1.25	1.72	1.87	0.06	-0.25	0.06	0.71	0.11
nadE	"NAD synthetase, prefers NH3 over glutamine"	0.77	-0.12	-0.51	0.01	0.09	0.86	0.97	0.81	-0.04	0.08	1.29	1.46	1.52	1.54	-0.25	-0.86	-0.07	0.32	0.1
b1667	"orf, hypothetical protein"	0.53	-0.23	-0.05	-0.38	0.095	0.77	0.77	0.77	0.2	0.06	1.02	1.58	0.7	1.08	-0.06	-0.15	0.45	0.83	0.1
yfaD	"orf, hypothetical protein"	0.39	-0.19	0.13	-0.27	-0.02	0.8	0.96	1.02	0.38	0.29	1	1.29	0.75	0.72	-0.23	-0.62	-0.2	0.58	0.2
yhjE	putative transport protein	0.38	-0.08	0.12	-0.02	-0.19	0.9	1	1.13	0.57	0.58	1.58	1.92	1.7	2.05	0.6	0.31	-0.1	0.58	0.15
yjiT	"orf, hypothetical protein"	0.33	0.07	0.15	-0.03	0.325	0.9	0.83	0.91	0.91	0.96	1.2	1.33	1.23	1.24	0.75	0.37	0.3	0.7	0.16
yi21_4	IS2 hypothetical protein	0.2	0.03	-0.09	0.03	0.025	1.66	0.54	0.32	0.14	-0.03	1.01	1.15	1.2	1.27	0.29	0.49	0.52	0.82	0.48
yi21_5	IS2 hypothetical protein	0.12	0.1	-0.19	0.03	-0.02	1.58	0.55	0.44	0.21	-0.04	1.03	1.2	1.3	1.29	0.39	0.54	0.54	0.88	0.48
yi21_3	IS2 hypothetical protein	0.16	-0.3	-0.17	0.14	-0.085	1.61	0.9	0.84	0.55	0.36	1.54	1.51	1.28	1.61	0.85	0.38	0.73	0.83	0.2
yi21_2	IS2 hypothetical protein	0.16	-0.13	-0.24	-0.07	-0.095	1.08	0.66	0.32	0.21	0.12	1.02	1.2	1.01	1.2	0.24	0.25	0.43	0.24	0.23
yi22_6	IS2 hypothetical protein	-0.03	-0.27	-0.24	0	-0.02	1.12	0.59	0.55	0.51	0.14	1	0.99	1.44	1.52	0.49	0.73	0.69	0.08	0.37
yi22_1	IS2 hypothetical protein	0.42	-0.13	-0.18	0.16	0.005	1.43	0.99	0.99	0.75	0.46	1.4	1.6	1.78	1.73	0.42	0.7	0.87	0.58	0.15
b1578	"orf, hypothetical protein"	0.2	-0.16	-0.07	0.15	-0.05	1.33	0.8	0.74	0.64	0.31	1.32	1.48	1.79	1.71	0.49	0.94	0.79	0.2	0.11
yi22_3	IS2 hypothetical protein	0.15	-0.16	-0.16	0.06	0.05	1.33	0.95	0.82	0.56	0.34	1.3	1.5	1.71	1.69	0.81	0.7	0.82	0.48	0.31
yi22_4	IS2 hypothetical protein	0.12	-0.09	-0.24	0.05	-0.055	1.26	0.8	0.62	0.61	0.29	1.24	1.48	1.69	1.64	0.67	0.84	0.77	0.44	0.38
yi22_2	IS2 hypothetical protein	0.08	-0.27	-0.18	0.07	-0.105	0.96	0.72	0.7	0.61	0.36	1.26	1.49	1.63	1.63	0.31	0.62	0.77	0.11	0.42
fabA	"beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase"	0.1	-0.38	0.02	-0.08	-0.245	1.16	0.6	0.48	-0.04	0.16	0.98	1.41	1.65	1.89	0.52	1.03	1.34	1.12	0.29
b1284	putative DEOR-type transcriptional regulator	0.21	-0.03	0.03	0.16	0.08	0.87	0.7	0.36	-0.27	-0.3	1.26	1.33	1.26	1.59	0.11	0.14	0.44	0.46	0.3
yafE	putative biotin synthesis protein	0.67	-0.09	-0.18	-0.11	0.05	0.79	0.72	1.48	0.42	0.85	0.64	0.76	1.14	1.2	0.23	0	0.34	0.07	0.33
yciF	putative structural proteins	-0.42	0.7	-0.56	-0.34	-0.26	0.98	3.84	4.32	3.75	2.47	1.44	1.41	2.34	2.83	3.22	1.85	-0.01	0.32	-0.18
yciG	"orf, hypothetical protein"	-0.36	0.71	-0.47	0.35	-0.18	1.34	2.72	2.29	1.48	0.87	0.51	0.95	1.86	1.99	1.99	1.84	0.31		-0.06
b1707	"orf, hypothetical protein"		-0.03	0.39	0.08	0.075	1.11	1.27	1.79	1.33	0.57	1.37	1.4	1.12	1.7	0.72	1.08	0.63	-0.29	0.15
yaiT	"orf, hypothetical protein"	-0.38	0.25	0.28	-0.07	0.225	0.77	0.89	0.99	0.92	0.42	1.16	1.42	1.74	1.53	1.06	1.44	0.29	0.04	0.23
trpA	"tryptophan synthase, alpha protein"	-1	-1.07	-1.4	-1.24	-1.355	3.22	4.26	4.24	3.67	3.58	3.42	3.7	3.73	4.06	1.91	3.39	3.86	-0.12	0.1
trpB	"tryptophan synthase, beta protein"	-1.09	-1.39	-1.17	-1.23	-1.335	2.78	4.56	4.5	4.1	3.64	3.91	3.99	3.75	4.42	2.03	2.9	3.55		0.07
trpC	N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase	-1	-1.64	-1.19	-1.39	-1.54	3.13	4.86	4.9	4.48	4.18	4.62	4.76	4.39	5.29	2.13	3.45	4.08	-0.18	-0.06
trpD	"anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase"	-1.74	-2.17	-1.65	-1.78	-1.985	2.99	4.96	5.75	5.23	4.65	5.08	4.91	5.43	5.38	1.9	3.94	4.37	-0.25	0
trpE	anthranilate synthase component I	-1.22	-2.37	-1.69	-2	-2.035	3.51	5.23	6.35	5.65	4.88	5.73	5.8	6.29	6.38	2.64	4.49	4.76	-0.54	0.18
aroH	"3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible)"	-0.38	-0.67	-0.39	-0.41	-0.455	1.2	3.08	2.84	2.71	2.64	2.88	3.15	3.3	3.15	1.44	2.66	1.94	2.6	0.49
mtr	tryptophan-specific transport protein		-0.98	-0.96	-1.13	-0.99	1.94	4.41	4.34	3.87	3.24	4.32	5.17	4.24	5.04	2.29	3.02	2.45	1.55	-0.06
rstA	response transcriptional regulatory protein (RstB sensor)	0.23	-0.36	-0.09	-0.12	-0.22	0.77	0.48	0.75	1.23	0.6	0.11	0.52	0.86	1.44	0.21	0.07	-0.34	0.96	0.19
aroG	"3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible)"	0.21	-0.62	-0.86	-0.71	-0.77	0.69	0.16	0.26	-0.76	-0.67	0.5	0.91	0.84	1.1	0.45	0.55	-0.49	0.33	0
sieB	phage superinfection exclusion protein	-0.89	-0.13	-0.97	-0.81	-0.1	-0.76	0.04	0.25	-0.04	0	0.98	1.12	2.06	2.09	1.06	1.03	0.08		-0.29
b1762	"orf, hypothetical protein"	0.48	0.61	0.45	0.6	0.505	-0.22	0.61	1.34	2.3	2.08	-0.42	-0.36	0.16	0.19	0.96	0.4	0.2	-0.23	0.36
fliS	flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity)	-1.64	-0.39	-0.25	-0.2	-0.05	0.14	0.1	-0.67	-0.64	0.36	1.18	1.1	0.44	-1.18	0.11	1.64	0.06	0.12	-0.01
tnaA	tryptophanase	4.09	2.94	3.24	3.28	4.155		-0.19	-0.14	-0.09	0.44	0.02	-0.18	-0.19	-0.24	0.19	-2.32	3.23	4.7	1.1
tnaB	low affinity tryptophan permease	0.64	0.46	1.1	0.92	1.33	0.36	0.35	0.42	0.53	0.56	0.76	0.74	0.47	0.47	0.71	0.4	1.82	1.44	0.23
aldA	"aldehyde dehydrogenase, NAD-linked"	0.59	-0.36	-1.09	0.16	0	1.27	0	0.16	0.81	1.63	0.06	0.08	-1.74	-1.4	0.57	-0.25	2.26	2.9	0.19
rpmA	50S ribosomal subunit protein L27		-0.51	-0.67	-0.84	-0.555	-0.27	-0.21	-0.16	-0.34	-0.32	-0.4	-0.42	-0.71	-0.86	-0.58	-0.94	-1.06	0.2	-0.15
glnG	"response regulator for gln (sensor glnL) (nitrogen regulator I, NRI)"	-0.42	-0.03	-0.22	-0.19	-0.465	-1.51	-1.22	-1.06	1.06	1.21	-1.38	-1.67	-1.04	-1.89	-0.4	-0.23	-0.71	0.07	-0.25
rffH	glucose-1-phosphate thymidylyltransferase	-0.25	0.07	-0.31	0.06	-0.125	-1.06	-1.25	-0.07	0.95	0.6	-1.45	-1.89	-1.74	-1.76	-0.45	-0.12	-0.71	-0.6	-0.1
recD	"DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease"	0.42	0.91	-0.41	-0.08	0.245	-1	-1.47	-0.74	0.58	0.77	-1.43	-1.09	-1.22	-1.4	-0.76	-0.84	0.04	-0.06	-0.06
argD	acetylornithine delta-aminotransferase	0.49	0.38	-1.01	-0.11	0	-1.74	-1.79	-1.47	-0.5	0.08	-1.79	-1.49	-2.19	-2.09	0.01	0.15	-0.76	-0.43	0.26
yjgF	"orf, hypothetical protein"	0.06	0.27	-0.39	0.02	-0.19	-0.92	-0.47	-1.03	0.03	0.18	-0.71	-1.03	-1.56	-1.18	-0.84	-1.22	-0.42	0.67	-0.36
codA	cytosine deaminase	0.41	0.44	-0.28	0.2	-0.03	-2.06	-0.32	-0.94	0.43	1.01	-0.58	-1.56	-1.79	-1.69	-0.89	-1.36	-0.47	0.03	0.21
codB	cytosine permease/transport	0.32	0.59	-1.01	0.05	0.07	-1.6	-0.49	-1.64	0.23	0.9	0.04	-1.51	-2.56	-2.25	-1.12	-1.43	-0.38	0.41	-0.1
carA	"carbamoyl-phosphate synthetase, glutamine (small) subunit"	0.24	-0.31	-0.7	0.23	-0.01	-1.94	-1.4	-2.56	0.32	1.34	-1.64	-2.64	-3.06	-2.47	-1.94	-2.56	-1.06	-0.18	-0.29
cysJ	"sulfite reductase (NADPH), flavoprotein beta subunit"	0.61	-0.05	-0.13	0.28	0.27	-0.86	-0.76	-1.09	0.8	1.11	-0.89	-1.69	-2.56	-1.74	-1.56	-1.94	-0.79	-0.34	-0.29
argB	acetylglutamate kinase	0.33	0.59	-0.84	0.04	0.48	-1.51	-1.6	-1.84	-0.38	0.71	-0.84	-1.51	-1.74	-1.43	-0.92	-1.74	-1.06	0.11	-0.27
caiF	transcriptional regulator of cai operon	-0.01	0.55	-0.34	-0.39	0.035	-1.43	-0.71	-1.4	-0.38	0.34	-0.47	-0.74	-1.15	-0.94	-0.97	-0.92	-0.54	-0.23	-0.15
yegQ	"orf, hypothetical protein"	-0.1	-0.17	-0.76	0.07	0.03	-0.76	-0.94	-1	-0.97	-1.12	-1.4	-1.15	-1.32	-1.03	-0.49	-0.69	-0.45	-0.17	-0.01
argI	ornithine carbamoyltransferase 1	0.18	0.62	-1.4	-0.25	0.16	-1.94	-1.89	-2.56	-2.12	-1.47	-1.22	-1.4	-1.79	-2.4	-0.42	-1.09	-1.25	0.56	-0.29
argA	N-acetylglutamate synthase; amino acid acetyltransferase	0.84	0.78	-1.51	0.03	0.42	-1.29	-1.74	-2	-0.81	-0.09	-2	-1.94	-2.18	-2.47	-0.86	-1.47	-0.4	0.54	-0.09
argG	argininosuccinate synthetase	0.59	0.83	-1.35	-0.13	0.295	-1.36	-1.56	-2.12	-1.18	-0.58	-1.2	-2.12	-2.48	-2.64	-1.18	-1.84	-0.79	0.62	-0.09
artP	ATP-binding component of 3rd arginine transport system	0.28	-0.08	-0.53	0.32	0.155	-0.76	-1.06	-1.4	-1.12	-1.03	-1.64	-1.43	-2.06	-1.89	-0.54	-0.94	-0.62	0	-0.23
argF	"ornithine carbamoyltransferase 2, chain F"	0.61	0.34	-1.21	-0.49	0.215	-1.64	-2.56	-2.84	-2.4	-1.47	-2.18	-2.4	-2.47	-2.74	-1.06	-1.69	-1.15	0.82	0.04
argC	N-acetyl-gamma-glutamylphosphate reductase	0.59	0.47	-0.57	-0.16	-0.01	-1.32	-2	-2.18	-1.29	-0.89	-2.18	-2.4	-2.47	-2.47	-0.97	-1.47	-0.62	0.74	-0.06
artJ	arginine 3rd transport system periplasmic binding protein	0.89	0.8	-0.11	0.28	0.545	-1.74	-2.56	-2.94	-2.4	-1.69	-2.64	-3.06	-3.18	-3.32	-1.32	-2.32	-0.71	0.72	0.04
yeeF	putative amino acid/amine transport protein	-0.01	0.2	-0.05	-0.05	0.205	-1.79	-1.36	-1.69	-0.86	-0.62	-1.43	-1.47	-1.84	-1.64	-0.81	-1.09	-1.69	0.03	-0.4
rplA	"50S ribosomal subunit protein L1, regulates synthesis of L1 and L11"	0.06	0.09	-0.46	0.01	0.105	-0.86	-1.12	-0.67	-0.23	-0.09	-1.47	-1.79	-1.69	-1.94	-1.15	-1.79	-0.92	-0.06	-0.58
rplK	50S ribosomal subunit protein L11	0.1	-0.26	-0.52	-0.09	0.01	-1.15	-1.03	-0.6	-0.09	-0.14	-1.43	-1.6	-1.84	-2.25	-1.15	-1.74	-0.62	0.3	-0.62
tufB	protein chain elongation factor EF-Tu (duplicate of tufA)	0.38	0.15	-0.21	0.27	0.03	-0.86	-0.47	-0.67	-0.67	-0.36	-0.81	-1.36	-1.6	-1.29	-1.12	-1.4	-0.81	0	0.16
fecB	"citrate-dependent iron transport, periplasmic protein"	0.33	-0.1	-0.4	-0.57	-0.51		-1.03	-1.6	-1.22	-1.32	-1.47	-2.74	-3.06	-3.06	-2.12	-2.18	-1.56	-0.2	0.19
fecC	"citrate-dependent iron(III) transport protein, cytosolic"	0.11	-0.03	-0.12	-0.25	-0.55	-0.51	-0.97	-1.25	-0.6	-0.56	-1.6	-2.4	-2.56	-3.06	-1.69	-2.06	-1.4	-0.84	-0.2
hisG	ATP phosphoribosyltransferase	0.63	0.06	0.06	0.04	0.145	-0.76	-0.94	-0.51	0.1	0.42	-1.36	-1.18	-1.4	-1.47	-1.29	-1.6	-0.89	0.1	0.26
fecD	"citrate-dependent iron transport, membrane-bound protein"	-0.43	0.11	-0.04	-0.36	-0.395	-0.76	-1.74	-1.69	-0.97	-0.74	-2	-0.84	-2.12	-1.56	-1.18	-1.12	-1.43	-0.69	-0.25
mgtA	"Mg2+ transport ATPase, P-type 1"	-0.51	-0.33	-0.34	-0.16	-0.42	-0.89	-1.18	-1.03	-0.64	-0.92	-1.47	-1.36	-1.74	-1.84	-0.32	-0.17	-0.49	-0.4	-0.51
yhdJ	putative methyltransferase	-0.32	-0.07	-0.31	-0.1	0.005	-1.22	-0.54	-0.84	0.11	-0.25	-1.03	-1	-1.56	-1.47	-0.34	-0.67	-0.03	-0.17	-0.15
yedF	"orf, hypothetical protein"	0.11	-0.27	-0.14	-0.34	-0.065	-1	-0.49	-0.58	-0.43	-0.3	-0.45	-1.22	-1.4	-1.47	-0.47	-0.71	0.19	1.18	-0.17
oppC	homolog of Salmonella oligopeptide transport permease protein	-0.25	0	0.14	0.13	0.075	-1.32	-3.18	-2.74	-1.74	-1.12	-3.47	-3.47	-2.94	-3.47	1.15	1.56	0.06	-0.79	-0.36
rbsC	D-ribose high-affinity transport system		0	-0.19	0.34	0.09	-1	-2.19	-1.76	-0.3	0.22	-1.9	-2.12	-1.43	-2.13	0.32	-0.43	0.34	0.89	0.44
argE	acetylornithine deacetylase	0.45	0.5	-0.18	0.04	0.225	-1.43	-0.58	-0.89	-1.22	-0.38	-0.26	-0.73	-0.59	-0.51	-0.69	-1.32	-0.74	0.12	-0.01
gltJ	glutamate/aspartate transport system permease	-0.34	-0.06	0.33	0.19	-0.075	-2.64	-0.79	-0.56	-0.27	-0.22	-1.06	-0.76	-1.36	-1	-0.38	-0.09	0.12	0.04	-0.03
gltK	glutamate/aspartate transport system permease	0.03	0.03	0.42	0.15	-0.035	-3.64	-0.58	-0.49	-0.22	-0.03	-1.09	-1.15	-0.84	-1.89	-0.2	-0.14	0.28	0.32	-0.17
narP	nitrate/nitrite response regulator (sensor NarQ)	0.2	0.14	-0.75	-0.01	-0.125	-3.18	-0.89	-1	-1.06	-1.25	-1.06	-1.03	-1.29	-1.43	-0.76	-0.92	-0.62	0.39	-0.32
ybeK	putative tRNA synthetase	0.34	-0.39	0.13	0.32	-0.075	-5.64	-0.25	-0.51		0.39	-0.2	-0.49	-1.51	-1.51	0.16	0.23	1.44	2.63	0.23
lamB	phage lambda receptor protein; maltose high-affinity receptor	0.62	-0.1	-0.58	-0.14	0.32	-1.56	-1.22	-1.74	-1.09	0.91	-1.56	-1.51	-1.56	-1.47	-0.4	-0.84	1.78	2.68	-0.12
malE	periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis	2.08	0.1	0.08	0.24	0.405	-0.27	-1.29	-2.4	-1.43	0.97	-1.25	-2	-2.74	-2.94	-0.04	-0.71	2.17	3.23	0.93
mviN	putative virulence factor	-1.29	0.02	0.37	-0.1	-0.115		-0.03	-0.67	-0.64	-0.71	0.08	-0.23	-0.45	-2.32	1.44	3.58	0.53	-0.06	0.85
fliA	flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons	-1.74	-0.17	-0.46	-0.22	-0.205	-0.12	-0.64	-1.29	-1.79	-0.89	-0.25	-1.09	-1.79	-3.64	1.37	3.17	0.19	0.21	0.45
modA	molybdate-binding periplasmic protein; permease	-0.97	0.01	-0.11	0.13	0.025	-0.84	-0.62	-1.43	-1.84	-1.4	-0.25	-0.62	-1.25	-2.25	0.37	1.86	0.08	0.2	0.07
cheZ	chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator	-1.43	-0.19	0.21	-0.1	-0.26	-0.86	-1.4	-1.56	-1.06	-0.27	-1.18	-2.18	-3.47	-2.84	1.09	2.17	-0.36	-0.58	0.21
cheB	response regulator for chemotaxis (cheA sensor); protein methylesterase	-1.89	0.36	-0.1	0.16	-0.065	-1.06	-0.86	-0.76	-0.29	0.67	-1.89	-2.32	-3.06	-3.32	1.39	3.4	-0.14	-0.42	-0.03
flgI	homolog of Salmonella P-ring of flagella basal body	-1.69	0.06	-0.43	-0.13	-0.305	-1.29	-0.79	-1.22	-0.4	1.18	-1.84	-2.74	-3.18	-3.64	0.61	2.62	-0.45	-0.71	0.42
flgJ	flagellar biosynthesis	-1.51	0.02	-0.39	-0.27	-0.07	-0.03	-1	-1.12	-0.18	1.28	-2.06	-2.47	-3.32	-4.06	1.04	3.03	-0.23		0.2
flgG	"flagellar biosynthesis, cell-distal portion of basal-body rod"	-1.12	-0.04	-0.15	-0.24	-0.235		-0.47	-1.4	-1.06	0.77	-0.89	-2	-3.32	-3.84	0.59	1.97			0.52
fliI	flagellum-specific ATP synthase	-1.74	0.01	0.38	-0.08	0.205	-0.94	-0.27	-0.45	1.07	2.27	-2.4	-2.4	-3.84	-3.84	0.58	1.66	-0.58	-0.84	-0.2
fliJ	flagellar fliJ protein	-1.56	0.1	-0.15	-0.04	0.02	-0.97	-1	-0.76	0.99	2.05	-2.18	-2.56	-3.32	-4.32	0.83	1.82	-0.38	-1	0.21
flgB	"flagellar biosynthesis, cell-proximal portion of basal-body rod"	-1	-0.05	-0.63	-0.46	-0.025	-0.92	0.25	-0.62	-0.36	1.29	-0.09	-1.51	-2.25	-4.32	0.18	1.56	-0.04	-0.27	0.2
b0805	putative outer membrane receptor for iron transport	0.42	-0.04	-0.61	-0.6	-0.33	-0.67	-2.4				-1.4	-2.25	-1.56		2.77	1.99	-0.58	0.73	-0.17
ybdB	"orf, hypothetical protein"	-0.09	-0.04	-0.45	-0.04	-0.17	-0.86	-1.6	-1.56	-1.47	-0.32	-0.79	-0.84	-1.09	-0.92	1.53	0.67	-0.71		-0.64
fepE	ferric enterobactin (enterochelin) transport	0.24	0.55	-1.15	-0.05	-0.51	-0.07	-0.69	-0.89	-0.3	0.21	-0.4	-0.17	-0.54	-0.81	2.44	2.35	-0.01		-0.27
cirA	outer membrane receptor for iron-regulated colicin I receptor; porin; requires tonB gene product	0.55	0.03	-1.26	-1.05	-0.23	0.11	-0.47	-1.22	0.23	2.79	-0.01	-1.47	-1.32	-1.79	2.72	1.56	0.56	0.93	-0.47
rpsU	30S ribosomal subunit protein S21	-0.04	-0.88	-0.83	-0.58	-0.125	-0.86	0.18	0.14	0.13	0.2	0.04	0.12	-0.18	-0.18	-0.34	-0.17	-0.64	1.1	0.01
wrbA	trp repressor binding protein; affects association of trp repressor and operator	0.44	-0.4	-0.78	-0.53	0.255	-1.29	-0.09	-0.22	-0.49	-0.45	0.15	1.09	0.78	0.72	-0.54	-0.6	-1.84	-1.89	-0.07
yeaG	"orf, hypothetical protein"	0.18	-0.24	0.19	-0.02	-0.28	-1.29	0.9		0.76	1.34	0.64	0.04	-0.22	0.11	-0.38	-0.47	-1.84	-2.18	-0.12
ygjG	probable ornithine aminotransferase	-0.14	0.04	-0.17	-0.06	-0.14	-0.76	0.51	0.08	0.03	0.34	0.28	0.16	0.11	-0.09	-0.81	-0.71	-2.12	-1.74	0.28
otsB	"trehalose-6-phosphate phophatase, biosynthetic"	0.21	0.26	0.15	-0.04	0.07	-1	0.1	-0.01	-0.18	-0.09		0.33	0.15		-0.36	-0.51	-1.64	-2.32	0.21
talA	transaldolase A	0.36	0.05	-0.31	0.26	0.13	-1.12	0.26	-0.07	-0.6	-0.4	0.38	0.08	0.23	0.49	-0.62	-0.79	-1.94	-2.25	-0.04
katE	catalase; hydroperoxidase HPII(III)	0.16	-0.1	-0.27	0.08	0.04	-1.47	-0.29	-0.25	-0.04	-0.01	-0.1	-0.25	-0.17	-0.12	-0.34	-0.43	-1.69	-2.74	-0.18
osmY	hyperosmotically inducible periplasmic protein	0.18	-0.53	-0.4	0.08	0.21	-1.15	-0.22	-0.09	0.1	0.12	-0.34	-0.32	-0.2	-0.17	-0.27	-0.94	-2.56	-2.74	-0.34
poxB	pyruvate oxidase	-0.04	-0.25	-0.02	0.18	-0.105	-1.09	0.15	0.18	-0.06	0.21	-0.29	-0.1	-0.42	0	-0.3	-0.38	-2.06	-2.4	0.41
ybaS	putative glutaminase	0.28	0.32	0.3	-0.07	0.165	1.12	-0.12	-0.45	-0.89	-0.84	0.1	-0.09	-0.17	0.1	0.07	-0.01	-2.47	-3.06	0.2
gadB	glutamate decarboxylase isozyme	0.39	-0.08	0.13	-0.05	-0.035	2.05	0.55	0.62	0.08	-0.09	0.86	0.72	1.01	1.12	0.25	-0.18	-1.6	0.86	0.12
yiaE	putative dehydrogenase	0.74	-0.09	0.01	0.34	0.045	0.98	0.52	0.29	-0.38	-0.43	0.87	0.62	0.6	0.88	-0.3	-0.84	-5.06	0.46	0.36
gpmB	phosphoglyceromutase 2	-0.3	-0.11	-0.2	-0.03	-0.02	0.04	0.26	0.25	0.14	-0.1	0.85	0.75	1.1	0.96	-3.32	-3.84	-0.32	-0.38	
yjjK	putative ATP-binding component of a transport system	0.24	-0.2	-0.41	0.13	0.06	-0.17	0.51	0.28	0.07	0.3	1.03	0.58	0.85	0.71	-2.18	-3.18	-0.25	0.08	-0.04
b3001	putative reductase	0.42	-0.17	0.06	0.2	-0.09	0.3	0.24	0.11	0.24	0.14		0.32	0.43	0.2	-3.64	-3.47	0.99	1.08	-0.29
tyrR	"transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport"	0.4	-0.08	0.14	-0.03	-0.115	0.51	0.28	0.56	0.37	0.34	0.3	0.39	0.75	1.13	-5.64	-6.64	0.8	0.42	-0.18
ycjG	putative muconate cycloisomerase I (EC 5.5.-.-)	0.21	-0.05	0.29	0.1	0.06	0.62	0.39	0.48	0.14	-0.07	0.48	0.45	0.7	0.84	-4.64	-4.64	0.81	0.77	0.03
yqhA	"orf, hypothetical protein"	0.24	0	0.23	0.05	-0.02	0.25	0.46	0.33	0.07	-0.2	0.73	0.87	0.53	0.99	-3.64	-4.32	-0.07	0.78	-0.76
b1327	"orf, hypothetical protein"	-0.1	-0.11	0.15	0.13	-0.065	0.57	0.58	0.49	-0.14	-0.23	0.6	0.57	0.99	0.86	-4.06		0.58	-0.18	
b1172	"orf, hypothetical protein"	0.15	-0.49	-1.43	-0.56	-0.025	-0.4	0.33	-0.1	-0.07	-0.12	0.03	0.04	-0.09	0.25	-1.51	-2.84	-0.07		-0.45
ycjX	putative EC 2.1 enzymes	-0.03	0.11	0.24	-0.07	0.095	0.36	-0.56	-0.69	-2.12		-1				-4.06	-2.25	-0.01	0.19	-0.25
hybA	hydrogenase-2 small subunit	-0.2	0.04	0	0.05	-0.15		-0.62	-0.6	-0.89	-0.97		-0.32	-0.45	-0.64	-1.84	-2.25	0.26		-0.54
hybB	probable cytochrome Ni/Fe component of hydrogenase-2	-0.18	0.13	0.32	-0.04	0.155	-0.51		-0.14	-0.23	-0.97	-0.64	-0.54	-0.36		-4.06	-2.84	0.23	-0.12	-1.12