PROMOTER INFORMATION



Promoter id PM00534
Name otsA
Synonyms
strand reverse
+1 start 1979675
Sigma Factor Sigma70
Basal Transcription Value
Equilibrium Constant
Kinetic Constant
Strength Sequence
Sequence CATCATGGCG ACTGGCGGGT GTGCCGGATG TCTGGAGCTG GCTTGAAATG ATAACCACCG cATTACAACA AAAAAGAGAA A
Notes otsA is an internal weak promoter, it is within the otsB gene and 39 nt upstream from the otsA start codon. Upstream of otsB there is an inverted repeat, and a half-site of this repeat is also found in front of otsA. These may represent binding sites for a regulatory protein. The trancription of this operon is reduced when the rpoS gene is inactivated, but it donīt known the SigmaS type interaction (direct or indirect) on otsBA operon.
Evidence 1,3
Score
References MEDLINE 92078100
MEDLINE 94320793
Type known