Promoter id | PM00534 |
Name | otsA |
Synonyms | |
strand | reverse |
+1 start | 1979675 |
Sigma Factor | Sigma70 |
Basal Transcription Value | |
Equilibrium Constant | |
Kinetic Constant | |
Strength Sequence | |
Sequence | CATCATGGCG ACTGGCGGGT GTGCCGGATG TCTGGAGCTG GCTTGAAATG ATAACCACCG cATTACAACA AAAAAGAGAA A |
Notes | otsA is an internal weak promoter, it is within the otsB gene and 39 nt upstream from the otsA start codon. Upstream of otsB there is an inverted repeat, and a half-site of this repeat is also found in front of otsA. These may represent binding sites for a regulatory protein. The trancription of this operon is reduced when the rpoS gene is inactivated, but it donīt known the SigmaS type interaction (direct or indirect) on otsBA operon. |
Evidence | 1,3 |
Score | |
References | MEDLINE 92078100 MEDLINE 94320793 |
Type | known |